prot_L-elsbetiae_contig963.18610.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig963.18610.1
Unique Name	prot_L-elsbetiae_contig963.18610.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	169

Homology

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BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 6.010e-78
Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = 0

Query:   14 PWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            P S+T  ARPGGRAARLL DEPIRIYVPM MR W+M ACH++A CHLG+ARTL++LERFYWW+GMSV T++WVR C +CQARKSSR T RWP + +PLPSGPG+++SVDYFGPLP TPRG +YILLFTDRFSRRADMYAVT A+FTAEGTA++LVN
Sbjct:  301 PPSST-TARPGGRAARLLNDEPIRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKSSRQTPRWPTLCLPLPSGPGVSVSVDYFGPLPLTPRGNTYILLFTDRFSRRADMYAVTAAEFTAEGTADVLVN 455

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BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KFR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR4_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 6.460e-77
Identity = 116/164 (70.73%), Postives = 136/164 (82.93%), Query Frame = 0

Query:    6 SLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            S ++   TP S T   RPGGRAARLL DEPIRIYVP+ MR W+M  CH++A CHLG+ARTL++LERFYWWIGMSV T++WVR C +CQARKSSR T RWP +S+PLPSGPG+++SVD+FGPLP TPRG +YILLFTDRFSR ADMYAVT  +F AEGTA ILVN
Sbjct:  235 SGDRAAATPSSMT--TRPGGRAARLLNDEPIRIYVPILMRPWMMQVCHADASCHLGAARTLSMLERFYWWIGMSVCTKWWVRHCLRCQARKSSRQTPRWPTMSLPLPSGPGVSVSVDHFGPLPLTPRGNTYILLFTDRFSRHADMYAVTAEEFIAEGTAEILVN 396

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BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 4.500e-74
Identity = 117/165 (70.91%), Postives = 138/165 (83.64%), Query Frame = 0

Query:    5 LSLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            L + K T  P S     RPGGRAARLL DEPIRIYVPM MR W+M ACH++A CHLG+ARTL++LERFYWW+GMSV T++WVR C +CQARK+S  T RWP + +PLPSGPG+++SVDYFGPLP TPRG +YILLFTDRFSRRADMYAVT A+FTAEGTA++LVN
Sbjct:  814 LLVRKQTTPPLS--AATRPGGRAARLLNDEPIRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKASHQTPRWPTLCLPLPSGPGVSVSVDYFGPLPLTPRGNTYILLFTDRFSRRADMYAVTAAEFTAEGTADVLVN 976

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BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5JTW9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW9_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.270e-64
Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL      R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIG+  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN
Sbjct:   59 VGRSGGRTTRLPNTGVPRVYVPMLMRRWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTSRWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 208

[Close]

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KGR2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGR2_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 7.540e-63
Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL      R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIG+  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN
Sbjct:   59 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTSRWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 208

[Close]

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KKB3_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB3_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.690e-62
Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL      R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIG+  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN
Sbjct:  301 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 450

[Close]

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5KK47_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK47_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 3.290e-60
Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = 0

Query:   37 RIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            R+YVPM MR WV+ ACH+ A  HLG  RT  LLERFYWWIG+  S R+W+RAC  CQARK+SR T RWP+I++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA GTA+I VN
Sbjct:   15 RVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLPVTAKGNSYILLFTDRFSRRADMFAVTAAEFTARGTAHIFVN 147

[Close]

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5K119_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K119_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 4.670e-60
Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL      R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIG+  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+ TANI VN
Sbjct:  428 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKRTANIFVN 577

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BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5K2S7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2S7_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 8.750e-60
Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL  +   R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIGM  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+ V  A+FTA+GTANI VN
Sbjct:   59 VGRSGGRTTRLPNNGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGMDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFHVIAAEFTAKGTANIFVN 208

[Close]

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Match: A0A6H5J9W8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W8_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 3.620e-59
Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 0

Query:   20 VARPGGRAARLLQDEPIRIYVPMCMRSWVMFACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRHTVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADMYAVTDADFTAEGTANILVN 169
            V R GGR  RL      R+YVPM MR WV+ ACH++A  HLG  RT  LLERFYWWIG+  S R+W+R+C  CQARK+SR T RWPII++PLP GPG  + VD+FGPLP T +G SYILLFTDRFSRRADM+AVT A+FTA+GTANI VN
Sbjct:  534 VGRSGGRTTRLPNTGVPRVYVPMLMRPWVLRACHTHAFFHLGVHRTQRLLERFYWWIGVDRSVRWWLRSCLVCQARKTSRQTARWPIIAMPLPQGPGTVVGVDFFGPLPLTAKGNSYILLFTDRFSRRADMFAVTAAEFTAKGTANIFVN 683

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig963.18610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KAD8_9PHAE	6.010e-78	75.64	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KFR4_9PHAE	6.460e-77	70.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JUZ4_9PHAE	4.500e-74	70.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTW9_9PHAE	3.270e-64	65.33	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KGR2_9PHAE	7.540e-63	65.33	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KKB3_9PHAE	2.690e-62	65.33	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KK47_9PHAE	3.290e-60	67.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K119_9PHAE	4.670e-60	64.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K2S7_9PHAE	8.750e-60	64.67	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J9W8_9PHAE	3.620e-59	65.33	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 105..168 e-value: 1.3E-7 score: 33.0
None	No IPR available	GENE3D	1.10.340.70		coord: 21..97 e-value: 1.5E-12 score: 49.5
None	No IPR available	PANTHER	PTHR24559:SF275		coord: 32..168
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 32..168
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 40..97 e-value: 9.6E-16 score: 57.6
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 110..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig963	contig	L-elsbetiae_contig963:29315..29821 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig963.18610.1	mRNA_L-elsbetiae_contig963.18610.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig963 29315..29821 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig963.18610.1 ID=prot_L-elsbetiae_contig963.18610.1|Name=mRNA_L-elsbetiae_contig963.18610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
TVCDLSLEKTTKTPWSNTGVARPGGRAARLLQDEPIRIYVPMCMRSWVMF
ACHSNALCHLGSARTLALLERFYWWIGMSVSTRYWVRACQKCQARKSSRH
TVRWPIISIPLPSGPGLAISVDYFGPLPRTPRGYSYILLFTDRFSRRADM
YAVTDADFTAEGTANILVN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR041588	Integrase_H2C2
IPR012337	RNaseH-like_sf