prot_L-elsbetiae_contig941.18402.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig941.18402.1
Unique Nameprot_L-elsbetiae_contig941.18402.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length167
Homology
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BLAST of mRNA_L-elsbetiae_contig941.18402.1 vs. uniprot
Match: A0A6H5LDU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDU4_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 4.630e-71
Identity = 133/172 (77.33%), Postives = 140/172 (81.40%), Query Frame = 0 
Query:    4 GRMSPLSAGVGGRVGA-TWGGLGSPSATGYAAPSPTGAPRTLPPAALAAA-VVREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFRSVQDKVKTASGGLDEAP-------SADKPATGAMHPLMASKRGSRSISSPALTQFADYAEQLPRLQTPPFKRRKSVSSFV 166
            GRMSPL           TWGGLGSPS  G+AAPSPTGAPRTLPPAALAAA V+REGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFF+SV DKVKTAS  L E         S ++   GAMHPLMASKRG RSISSPALTQFA+YAEQLPRLQTPPFKRRKSV+SFV
Sbjct:  449 GRMSPLGRXXXXXXXXXTWGGLGSPSGAGFAAPSPTGAPRTLPPAALAAAAVIREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQXXXXXPASPEETGKGAMHPLMASKRGFRSISSPALTQFANYAEQLPRLQTPPFKRRKSVASFV 620
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BLAST of mRNA_L-elsbetiae_contig941.18402.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.200e-50
Identity = 95/118 (80.51%), Postives = 97/118 (82.20%), Query Frame = 0 
Query:   56 EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFRSVQDKVKTASGGLDEAP-------SADKPATGAMHPLMASKRGSRSISSPALTQFADYAEQLPRLQTPPFKRRKSVSSFV 166
            EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFF+SV DKVKTAS  L E         S D    G MHPLMASKRG RSISSPALTQFA YAEQLPRLQTPPFKRRKSV+SFV
Sbjct:  351 EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDATGKGGMHPLMASKRGFRSISSPALTQFAHYAEQLPRLQTPPFKRRKSVASFV 468
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig941.18402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDU4_9PHAE4.630e-7177.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI2.200e-5080.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig941contigL-elsbetiae_contig941:6896..8044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig941.18402.1mRNA_L-elsbetiae_contig941.18402.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig941 6792..8088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig941.18402.1 ID=prot_L-elsbetiae_contig941.18402.1|Name=mRNA_L-elsbetiae_contig941.18402.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
MTGGRMSPLSAGVGGRVGATWGGLGSPSATGYAAPSPTGAPRTLPPAALA
AAVVREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFRSVQDKVK
TASGGLDEAPSADKPATGAMHPLMASKRGSRSISSPALTQFADYAEQLPR
LQTPPFKRRKSVSSFV*
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