prot_L-elsbetiae_contig94.18392.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig94.18392.1
Unique Nameprot_L-elsbetiae_contig94.18392.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: D7G8S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S9_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.460e-48
Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = 0
Query:    1 MDNSSLTQSQREALRVEGFGPTTVHFIKNQGGWMFNLIFAHLLFWLFGFTALIDYGGERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMVVVVKAIRYDPNAD 114
            MDN+SLTQSQREAL V+GFGPT VHF+KN GGWMFNL+FAHLLFWLFGFTAL+++G                 +SGQIKSGPSGSGVGIITTLLMAV T+VVV KAIRYDPNA+
Sbjct:    1 MDNASLTQSQREALIVKGFGPTMVHFVKNNGGWMFNLVFAHLLFWLFGFTALLEFGYSD----------LNQDSSGQIKSGPSGSGVGIITTLLMAVGTLVVVAKAIRYDPNAE 104          
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: A0A7S2KAR8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.540e-9
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   26 FIKNQGGWMFNLIFAHLLFWLFGFTALIDYGGERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMVVVVKAIRYD 110
            F+K+Q GW  N   AH+LFWL+GF  L +YG                S  G I SGP GSG GI+T L++ V ++V + K + ++
Sbjct:   10 FLKSQPGWALNFTLAHVLFWLYGFPDLSEYGYSN-----------TFSEQGNIPSGPLGSGGGIVTLLIVCVMSLVWLQKLVSHE 83          
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: A0A6G0XHM4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHM4_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-6
Identity = 32/93 (34.41%), Postives = 49/93 (52.69%), Query Frame = 0
Query:   22 TTVHFIKNQGGWMFNLIFAHLLFWLFGFTALIDYGGERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMVVVVKAIRYDPNAD 114
            T V +I++  GW FNL+ +++LFWL GF  + DYG             E    +G I SG  GSGV +IT +LM +  +V   + + +  + D
Sbjct:    7 TVVGYIQDNVGWGFNLVVSNILFWLTGFPTVRDYGYSS----------ENYDENGGIPSGGEGSGVFVITLVLMVICYIVYFGRMVTFLTSKD 89          
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: A0A485KR65_9STRA (Aste57867_10737 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR65_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.270e-5
Identity = 32/88 (36.36%), Postives = 44/88 (50.00%), Query Frame = 0
Query:   14 LRVEGFGPTTVHFIKNQGGWMFNLIFAHLLFWLFGFTALIDYGGERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMV 101
            +   G   T + +I +  GW FNLI +++LFWL GF  + DYG                  +G I SG  GSGV +IT +LM V  +V
Sbjct:    1 MTAHGPPRTVLGYILDNQGWGFNLIISNILFWLTGFPTVRDYGYSS----------TNYDENGGIPSGGEGSGVFVITLVLMIVCYLV 78          
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: A0A024T7R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T7R1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.730e-5
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 0
Query:   22 TTVHFIKNQGGWMFNLIFAHLLFWLFGFTALIDYG------GERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMV 101
            T V F+ +  GW FNL+ +++LFWL GF    DYG       E+GG                I SG  GSGV +IT +LM +  +V
Sbjct:   12 TVVAFVLDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGG----------------IPSGGEGSGVFVITLVLMLICYLV 81          
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Match: A0A397AWI6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AWI6_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 8.230e-5
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 0
Query:   22 TTVHFIKNQGGWMFNLIFAHLLFWLFGFTALIDYG------GERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATMVVVVKAIRY 109
            T + +I++  GW FNL+ +++LFWL GF    DYG       E+GG                I SG  GSGV +IT +LM +  +V   + I +
Sbjct:   13 TVLAYIQDNTGWGFNLVVSNILFWLTGFPIYRDYGYSNVHYNEKGG----------------IASGGEGSGVFVITLVLMLICYLVYFGRMISF 90          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig94.18392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8S9_ECTSI1.460e-4871.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2KAR8_9STRA5.540e-938.82Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6G0XHM4_9STRA1.190e-634.41Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KR65_9STRA5.270e-536.36Aste57867_10737 protein n=1 Tax=Aphanomyces stella... [more]
A0A024T7R1_9STRA5.730e-537.21Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A397AWI6_9STRA8.230e-534.04Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig94contigL-elsbetiae_contig94:954..3052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig94.18392.1mRNA_L-elsbetiae_contig94.18392.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig94 954..3052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig94.18392.1 ID=prot_L-elsbetiae_contig94.18392.1|Name=mRNA_L-elsbetiae_contig94.18392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MDNSSLTQSQREALRVEGFGPTTVHFIKNQGGWMFNLIFAHLLFWLFGFT
ALIDYGGERGGGGGSKPGREKGSASGQIKSGPSGSGVGIITTLLMAVATM
VVVVKAIRYDPNADLA*
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