mRNA_L-elsbetiae_contig9370.18371.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 503 bits (1294), Expect = 2.300e-170 Identity = 256/332 (77.11%), Postives = 275/332 (82.83%), Query Frame = 1 Query: 1 QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHGYGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISLKASGGAGTG-----LCARSGGARGGGRFAHLPPRLRATWQSYHRKFHVTDLVEKEGGVDRVVDDNLDTDYGNENYAALDNNTVHMPITGVIPAAGGG-AVKGKKAGFRGLV 978 QE L EFWSLWGYMANTVIFFLTG AAT+AFG DS I+A DWGYLVLLWVACH+VR VI +YPVLKHGYGTNWQ M+VL+YAGLRGAVGLTLAL+VQE NE I ++ GD +MFM+AGLAIMTLLINGTT G LLSYF MDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVP++TSRVYWHRIRYGSVVLANGEDEEIS G + L G G GRFAHLPPRLRATWQSYHRKFHVTDLVEKEGGV RVVDDNLDTDYGNENY ALDN MP +G++ AA GG + KGK+ G RGLV Sbjct: 326 QESLREFWSLWGYMANTVIFFLTGFTAATRAFGSDSTIQARDWGYLVLLWVACHIVRGFVICASYPVLKHGYGTNWQQMLVLTYAGLRGAVGLTLALVVQE----NEAIDDDVGDMVMFMMAGLAIMTLLINGTTCGKLLSYFRMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPIMTSRVYWHRIRYGSVVLANGEDEEISQSKPSGLSSATASAILSLPGNGGGGAGRFAHLPPRLRATWQSYHRKFHVTDLVEKEGGVHRVVDDNLDTDYGNENYHALDNTVHIMPSSGIVSAASGGESGKGKRGGIRGLV 653
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 2.140e-157 Identity = 249/333 (74.77%), Postives = 269/333 (80.78%), Query Frame = 1 Query: 1 QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHGYGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISLKASGGAGTGLCAR------SGGARGGGRFAHLPPRLRATWQSYHRKFHVTDLVEKEGGVDRVVDDNLDTDYGNENYAALDNNTVHMPITGVIPAAGGG-AVKGKKAGFRGLV 978 +E L EFWSLWGYMANTVIFFLTGL AATKAFG DS I+A DWGYLVLLWVACH+VR VI +YPVLKHGYGTNWQ +VL+YAG+RG GLTL LIVQE NE I ++ GD +MFMIAGLAIMTLLINGTT G LLSYF MDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWP+VWRYVP++TSRVYWHRIRYGSVVLA GEDEEIS G + + G G GRF HLPPRLRATWQSYHRKFHVTDLVEKEGGV RVVDDNLDTDYGNENY ALDN MP +G++ A GG + KGK+ G RGLV Sbjct: 232 RESLREFWSLWGYMANTVIFFLTGLTAATKAFGSDSTIQARDWGYLVLLWVACHIVRGFVICASYPVLKHGYGTNWQQKLVLTYAGVRGGGGLTLGLIVQE----NEAIDDDVGDMVMFMIAGLAIMTLLINGTTCGKLLSYFRMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPVVWRYVPIMTSRVYWHRIRYGSVVLAKGEDEEISQSQPSGLSSATASAMLSLLPGNGGGGAGRFTHLPPRLRATWQSYHRKFHVTDLVEKEGGVHRVVDDNLDTDYGNENYHALDNTVHIMPSSGIVSAPSGGESGKGKRGGIRGLV 560
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 238 bits (607), Expect = 2.000e-69 Identity = 127/280 (45.36%), Postives = 186/280 (66.43%), Query Frame = 1 Query: 1 QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVL-KHGYGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISLKASG-----GAGTGLCARSGGAR-----------GGGRFAHLPPRLRATWQSYHRKFH 789 + +H FWS+ Y+ANTVIFF++GL +A D++ +WG L LL+V +VR++V+++ PVL K GYG + ++VL++AGLRGAVGLTLALIV E R +E++ D ++F +AG+A +TL+ING+ G L+S G+DR+T A+TE+F +ACSA+E++LEH ++ LK DRFLGDA+W +VWRY+PV TS+ YWHRIR+G++ L+ E+E+I + G G + R+ GG + LP RLR TW +YH+KFH Sbjct: 222 EHSMHTFWSMATYVANTVIFFVSGLIIGDQAIFNDTL-GGREWGLLALLYVLLQLVRSVVVLLLLPVLTKWGYGMTHRQLIVLAFAGLRGAVGLTLALIVVEDDRFSEDVR----DLVLFYVAGIAALTLIINGSLCGYLVSALGLDRSTTAETEVFTKACSAIEARLEHKLDLLKGDRFLGDADWEMVWRYLPVSTSKTYWHRIRHGNINLSVEEEEDIHMIRDGIVNEAGLHGDVAFRAHQVHKWFTRRILRLPGGVGYCELPSRLRVTWYTYHKKFH 496
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA) HSP 1 Score: 244 bits (623), Expect = 3.070e-69 Identity = 142/341 (41.64%), Postives = 203/341 (59.53%), Query Frame = 1 Query: 1 QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSI--IEAADWGYLVLLWVACHVVRALVIVMAYPVLKHGY---------GTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRAT--KAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISLKASGGAGT---------GLCARSGGARG------------GGRFAHLPPRLRATWQSYHRKFHVTD-----LVEKEGGVDRVVDDNLDTDYGNENYAALDNNTVHMP 906 Q PL E W L ++A T++FFL GL A +A+G + ADWGY++ L++ ++ RA+ + + YP L+ G T+ + M L + G+RG + LTLAL+VQ+ N + E G++IMF + GL + LLING +L GMDR+ + +E+F RAC+A+E+KLE V EELK+DRFLGDA+WPIVWRY+PV+T+ YWHRIRYG+++LANGE++ S GGAG G+ R G RG +FAHLPPRLR WQ +HR + + L +E D +++ N++ ++GNE Y +LD TVHMP Sbjct: 299 QRPLTELWGLMSFLARTLVFFLAGLAATEQAYGDSGAPHVTGADWGYMIALYLWVYLSRAIAMAVCYPALRWGCFADSASAETETDLRHMAALWWCGVRGILALTLALLVQQ----NVELPEAAGNRIMFHVCGLVALGLLINGGALWPVLRLIGMDRSAGDELASEVFARACAAIEAKLEQVAEELKQDRFLGDADWPIVWRYIPVMTAHSYWHRIRYGTIMLANGEEQFNSAGDGGGAGGARGRLAPLWGVLRRIG--RGLLFVRAAADLASASKFAHLPPRLRDVWQRFHRIYGMQQEPLWALGSEE--FDAMLETNVNAEHGNERYRSLDG-TVHMP 630
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A7S2WTE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTE2_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.510e-61 Identity = 97/206 (47.09%), Postives = 152/206 (73.79%), Query Frame = 1 Query: 37 YMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHGYGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVE-ELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDE 651 Y+A+TVIFF+ G+ A + F + +DWG LVLL++A H +R ++ +++P+LK GYG ++ +VL + GLRGA+GL+LALI+++T E+ TE N D+++F +AG+A++TL+INGT L++Y G+DR +KA++E+F +C+ +E+KLEH VE ELK DRFLGDA++ +VWRY+PVL+++ YWHRI+ ++L E E Sbjct: 3 YVADTVIFFIAGVVMAVRIFSNHT--SGSDWGKLVLLYLALHGIRLFIVTLSWPILKRGYGLTYKEGLVLVFGGLRGAIGLSLALIIEDT--EDVQDTETNADRVVFHMAGIALLTLIINGTFMKPLINYLGLDRVSKAESEMFEHSCAVIEAKLEHFVENELKPDRFLGDADYSVVWRYIPVLSAQQYWHRIKSHKLILTQREKE 204
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A7S2WUH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH1_9STRA) HSP 1 Score: 206 bits (523), Expect = 6.420e-59 Identity = 97/206 (47.09%), Postives = 152/206 (73.79%), Query Frame = 1 Query: 37 YMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHGYGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVE-ELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDE 651 Y+A+TVIFF+ G+ A + F + +DWG LVLL++A H +R ++ +++P+LK GYG ++ +VL + GLRGA+GL+LALI+++T E+ TE N D+++F +AG+A++TL+INGT L++Y G+DR +KA++E+F +C+ +E+KLEH VE ELK DRFLGDA++ +VWRY+PVL+++ YWHRI+ ++L E E Sbjct: 3 YVADTVIFFIAGVVMAVRIFSNHT--SGSDWGKLVLLYLALHGIRLFIVTLSWPILKRGYGLTYKEGLVLVFGGLRGAIGLSLALIIEDT--EDVQDTETNADRVVFHMAGIALLTLIINGTFMKPLINYLGLDRVSKAESEMFEHSCAVIEAKLEHFVENELKPDRFLGDADYSVVWRYIPVLSAQQYWHRIKSHKLILTQREKE 204
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE) HSP 1 Score: 181 bits (458), Expect = 9.430e-49 Identity = 94/217 (43.32%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 10 LHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHG-YGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEI 657 L +FW + A+T IFFL+GL A +D I AAD+GYL+ L++A +++R LVI+ AYPVL+ G Y + M+VL+++GLRGAV L LAL+V I +E+ DKI+F+ AG+A+++LL+NGTT G L+ + +DRA++A +F +AC A+E ++ + LK+D FL DA+W +VWRY+P+ T+ Y+ R+ G + L+ E E+I Sbjct: 312 LMDFWKTLQFFADTTIFFLSGLIVIGVAVNEDRAINAADFGYLIALFIALYIIRGLVILAAYPVLRSGEYKISVPQMIVLTHSGLRGAVALILALVVDGV----HEIDQEDRDKIVFLTAGIAVLSLLVNGTTTGPLVRFLKLDRASEASQGVFGQACFALELSMQKQEQLLKEDPFLCDADWNLVWRYLPLFTAESYFTRLSMGHITLSADELEDI 524
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: A0A4D9CXX3_9STRA (Na_H_Exchanger domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXX3_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.840e-48 Identity = 92/226 (40.71%), Postives = 150/226 (66.37%), Query Frame = 1 Query: 1 QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHG-YGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISLKASG 675 + L+ FW++ G++ NT+IF + GL A + + + I + DWG +V L+V + +R +++ +P+L+ G YG + + VVL+Y+GLRGAVGLTLA+ + + S+ I D+I+F +AG ++++LL+NGTT L++ G+DR + A+ E++ R A+E ++E V LK++ FLGDA+W +VWRY+PVLT VYWHR R G +L + E E +SL++ G Sbjct: 289 RAELNSFWAIAGFITNTLIFVVAGLQMAMRGL-RSTYISSTDWGIMVGLYVLMNTLRLAGVIIFFPILRRGSYGIDTRQGVVLAYSGLRGAVGLTLAIAIHQDSQ----IPIATRDRILFHVAGASLLSLLVNGTTLKPLITVLGLDRESPAEVEVYQRTSIALEQRIEDRVMLLKREPFLGDADWGVVWRYLPVLTKDVYWHRFRQGHTLLTDWEAEYMSLRSRG 509
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: W7TNK5_9STRA (Sodium hydrogen exchanger 8 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNK5_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.380e-46 Identity = 88/221 (39.82%), Postives = 141/221 (63.80%), Query Frame = 1 Query: 4 EPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHG-YGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISL 663 L FW++ ++ T+IFF++GL A KA ++I+ DWGYL L ++ + R + + + +P L G YG NW+ V+LSY GLRGAV LTLAL+V + E I EE I+F AG+ ++T+LING+T +L ++ T+ + E++IRA + +E++LE +LK D++LG A+W +V+RY+PV + ++YWHR+R G + L ++ EI+L Sbjct: 295 RSLTSFWAMAAFITETIIFFVSGLIMAEKALVSETILPR-DWGYLFLFYLILNATRFVGVFLFFPTLARGPYGINWRQAVLLSYGGLRGAVSLTLALVVSQ----EEGIPEETRALILFFTAGIVLLTILINGSTCKLVLQKLKLNNPTRVEQELYIRAMNLIENELEVFAGKLKNDKYLGSADWNVVYRYLPVFSPQIYWHRVREGHICL---DEAEIAL 507
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Match: W7T4P8_9STRA (Salt overly sensitive 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4P8_9STRA) HSP 1 Score: 175 bits (443), Expect = 9.440e-46 Identity = 87/219 (39.73%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 10 LHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWVACHVVRALVIVMAYPVLKHG-YGTNWQTMVVLSYAGLRGAVGLTLALIVQETSRENENITEENGDKIMFMIAGLAIMTLLINGTTAGALLSYFGMDRATKAQTEIFIRACSAVESKLEHVVEELKKDRFLGDAEWPIVWRYVPVLTSRVYWHRIRYGSVVLANGEDEEISL 663 L FW++ +++ T+IFF++GL A KA +++ + DWGYL LL++ + R + + + +P L G YG NW+ V+LS+ GLRGAV LTLAL+V + E I EE I+F AG+ ++T+LING+T +L ++ T+ + E++IRA + +E++LE + +LK D++LG+A+W +V+RY+PV + ++YWHR+R G + L ++ EI+L Sbjct: 296 LKSFWAMAAFISETIIFFVSGLIMAEKALISETV-QGRDWGYLFLLYLIVNATRFVGVFLFFPTLARGPYGINWRQAVLLSWGGLRGAVSLTLALVVSQ----EEGIPEETRALILFFTAGIVLLTILINGSTCKLVLQKLKLNNPTRVEQELYIRAMNLIENELEVSLLKLKNDKYLGNADWNVVYRYLPVFSPQIYWHRVREGHICL---DEAEIAL 506 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9370.18371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9370.18371.1 >prot_L-elsbetiae_contig9370.18371.1 ID=prot_L-elsbetiae_contig9370.18371.1|Name=mRNA_L-elsbetiae_contig9370.18371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp QEPLHEFWSLWGYMANTVIFFLTGLDAATKAFGKDSIIEAADWGYLVLLWback to top mRNA from alignment at L-elsbetiae_contig9370:460..7582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9370.18371.1 ID=mRNA_L-elsbetiae_contig9370.18371.1|Name=mRNA_L-elsbetiae_contig9370.18371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7123bp|location=Sequence derived from alignment at L-elsbetiae_contig9370:460..7582- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9370:460..7582- >mRNA_L-elsbetiae_contig9370.18371.1 ID=mRNA_L-elsbetiae_contig9370.18371.1|Name=mRNA_L-elsbetiae_contig9370.18371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig9370:460..7582- (Laminarionema elsbetiae ELsaHSoW15)back to top |