mRNA_L-elsbetiae_contig9325.18325.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI) HSP 1 Score: 253 bits (646), Expect = 3.390e-82 Identity = 128/154 (83.12%), Postives = 135/154 (87.66%), Query Frame = 1 Query: 1 YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSGKGLLGALGCAAVLTLANTVVLARATFDGGAPPPLGRVVLAAGAIAAWTGLVEVSVPSPQKTLRCEGFPLAFDDNAVLPVLGALGAAAVFHVLGLGSCELRPWLF 462 YCLAGLGITSA+FPKHIALLGMLQLALGDPVAAL GHATRSVGWSRV +GKGLLGALGCA LTLAN+ VLA+A F+ GAP L R+VLA G IAAW VEVSVPSPQKTL CEGFPLAFDDNA LPVLGA+GAA VF VLGLGSCELRPWLF Sbjct: 150 YCLAGLGITSAMFPKHIALLGMLQLALGDPVAALCGHATRSVGWSRVGTGKGLLGALGCATALTLANSFVLAKARFESGAPT-LRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLF 302
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Match: A0A6U5JUM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5JUM7_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.630e-15 Identity = 59/170 (34.71%), Postives = 82/170 (48.24%), Query Frame = 1 Query: 1 YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSG-------KGLLGALGCAAVLTLANTVVLARATFDGGAPPPLGRVVLAAGAIAAWTGLVEVSVPSPQKTLRCEGF-----PLAFDDNAVLPVLGALGAAAVFHVLGLGSCE----LRPWLF 462 Y G+ +TSA+F K A LG+ QLA+ DP A+ FG +TR V WSR+ SG KG LG LG A N VL A F P ++ A+ A+ +++VP+P + + F P DDN V+P+ A +F L SC L P++F Sbjct: 241 YFFVGVTVTSALFSKAAATLGIFQLAIADPSASYFGRSTRHVYWSRIESGLGGFGRNKGFLGFLGGALACVPLNYQVLRMAQFGKIVPGGQQALLTASLALGMAGAFADLAVPTPALVMPEKVFGVRVPPFHVDDNFVVPIFAGFAATHIFKAL---SCPTDFTLAPFVF 407
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Match: A0A7S4AI34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI34_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.860e-15 Identity = 65/172 (37.79%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 1 YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSG-------KGLLGALGCAA--------VLTLA---NTVVLARATFDGGAPPPLGRVVLAAGAIAAWTGLVEVSVPSPQKTL--RCEGF---PLAFDDNAVLPVLGALGAAAVFHVLGLGSCEL 447 Y +G+ +TS +FPK A LG++QLA+ DP A+ FG ATR V WSR+ +G KG+LG LG A +L+LA NT A T A P + + LA G A L ++ VP+P TL R G P DDN V+PVL + +G EL Sbjct: 300 YYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTI---AKPTVLAISLALGMAGA---LADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 465
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Match: A0A7S4EJ41_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ41_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.540e-15 Identity = 65/172 (37.79%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 1 YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSG-------KGLLGALGCAA--------VLTLA---NTVVLARATFDGGAPPPLGRVVLAAGAIAAWTGLVEVSVPSPQKTL--RCEGF---PLAFDDNAVLPVLGALGAAAVFHVLGLGSCEL 447 Y +G+ +TS +FPK A LG++QLA+ DP A+ FG ATR V WSR+ +G KG+LG LG A +L+LA NT A T A P + + LA G A L ++ VP+P TL R G P DDN V+PVL + +G EL Sbjct: 420 YYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTI---AKPTVLAISLALGMAGA---LADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 585
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Match: UPI001989E47C (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=UPI001989E47C) HSP 1 Score: 53.1 bits (126), Expect = 1.670e-5 Identity = 39/144 (27.08%), Postives = 64/144 (44.44%), Query Frame = 1 Query: 1 YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSGKGLLGALGCAAVLTLANTVVLARATFDGGAPPPLGRVVLAAGAIAAWTGLVEVSVPSPQKTLRCEGFPLAFDDNAVLPVLGALGAAAVFHVLGL 432 + +A + ++ A+FPK IA+L +L LA+GDPV+++FG R +GK L+G AA + + + + G P + LA G ++ PL DDN +P++ L F V G+ Sbjct: 96 FYIASVLLSVAIFPKPIAILSILFLAIGDPVSSIFGITYGDRIGMRFANGKSLIGT---AAGMGICSVITFVYLMLTGVPLVPSSSIALAGGLAGGGAEMI----------------PLDIDDNFSIPLVSGLALWIAFLVFGV 220 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9325.18325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9325.18325.1 >prot_L-elsbetiae_contig9325.18325.1 ID=prot_L-elsbetiae_contig9325.18325.1|Name=mRNA_L-elsbetiae_contig9325.18325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp YCLAGLGITSAVFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRSGback to top mRNA from alignment at L-elsbetiae_contig9325:3282..3749+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9325.18325.1 ID=mRNA_L-elsbetiae_contig9325.18325.1|Name=mRNA_L-elsbetiae_contig9325.18325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig9325:3282..3749+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9325:3282..3749+ >mRNA_L-elsbetiae_contig9325.18325.1 ID=mRNA_L-elsbetiae_contig9325.18325.1|Name=mRNA_L-elsbetiae_contig9325.18325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig9325:3282..3749+ (Laminarionema elsbetiae ELsaHSoW15)back to top |