prot_L-elsbetiae_contig9319.18321.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig9319.18321.1
Unique Name	prot_L-elsbetiae_contig9319.18321.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	166

Homology

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: D7FZ40_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ40_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 5.770e-77
Identity = 121/148 (81.76%), Postives = 133/148 (89.86%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQ 148
            MGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYTDVAQAS+GL+GLL  +AWML NR   HP PSIGFPGYLYP+D  CE Y+
Sbjct:   58 MGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYTDVAQASLGLLGLLTTSAWMLSNRSPDHPSPSIGFPGYLYPDDATCEAYE 205

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 2.430e-75
Identity = 121/148 (81.76%), Postives = 133/148 (89.86%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQ 148
            MGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYTDVAQAS+GL+GLL  +AWML NR   HP PSIGFPGYLYP+D  CE Y+
Sbjct:  104 MGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYTDVAQASLGLIGLLTTSAWMLSNRSPDHPGPSIGFPGYLYPDDATCEAYE 251

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: D7FZ36_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ36_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 9.580e-51
Identity = 87/99 (87.88%), Postives = 94/99 (94.95%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYT 99
            MGLGLSL+INGLFIARHIN+A+ LTLPDFYGKAWGPAVE+LVSLLTC+SFICLLAGNL GLS+IIRFLFGG L TSVFIAG VTM+YTGAGGLLSVAYT
Sbjct:  104 MGLGLSLVINGLFIARHINEAQCLTLPDFYGKAWGPAVEVLVSLLTCISFICLLAGNLVGLSIIIRFLFGGELATSVFIAGIVTMIYTGAGGLLSVAYT 202

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT)

HSP 1 Score: 160 bits (406), Expect = 4.730e-43
Identity = 78/148 (52.70%), Postives = 110/148 (74.32%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQ 148
            +GLGLSLIING+F+AR I++  VLTLP+ Y + +GP VE+ VS + C SFI LLAGNL G++ ++ +L G    T+VF++G V  VYT +GGL SVA+TDV Q++IG++G L+ A W + N     PPPSIGFPGY+YP++  C++Y+
Sbjct:  142 IGLGLSLIINGVFLARFIHRENVLTLPEIYARYYGPVVEVCVSFVCCASFISLLAGNLVGMAAVLGYLGGIDQTTAVFVSGTVLFVYTVSGGLFSVAFTDVVQSTIGIIGALVTAFWFIQNAPAA-PPPSIGFPGYVYPDEATCKLYE 288

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 9.100e-42
Identity = 79/148 (53.38%), Postives = 104/148 (70.27%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTS-VFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMY 147
            +GLG+SLI+NGL +ARH+N A  LTLPDFY + +G   E+LVSL+ C SFI LLAGNL GL  I++F FGG      V++A  +   YT  GGL+SV Y DV QA  G+ GL++ +A+ML N    +PP S+GFPGY+YP+  +CEMY
Sbjct:  118 IGLGVSLILNGLLLARHVNNACCLTLPDFYARKYGKLFEVLVSLVLCTSFISLLAGNLVGLGRILQFCFGGISKAGGVWVAAALCASYTIGGGLVSVVYADVVQALTGVTGLIVFSAYMLSNYSQQYPPASVGFPGYIYPDQQVCEMY 265

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: K8FEG1_9CHLO (Solute:Sodium symporter family n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEG1_9CHLO)

HSP 1 Score: 157 bits (397), Expect = 1.040e-41
Identity = 76/147 (51.70%), Postives = 104/147 (70.75%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMY 147
            +GLGLSLI+N LF A+ +N   VLTLPD YGK +G A EI+ SL+ C SF+CLLAGNL G++ I+ +LF   +   VF++G + +VYT  GGL SVAYTDV Q+++G+ G L    W++ N E   PPPSIGFP Y+YP++   ++Y
Sbjct:  166 IGLGLSLILNALFFAKKMNAEGVLTLPDVYGKRYGVATEIIASLVLCCSFLCLLAGNLVGMAKILAYLFDLDITDGVFLSGIIILVYTACGGLFSVAYTDVIQSAVGMTGCLAAVYWIIKNAEFEAPPPSIGFPDYVYPDEATAKLY 312

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: C1E525_MICCC (Solute:Sodium symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E525_MICCC)

HSP 1 Score: 156 bits (395), Expect = 2.000e-41
Identity = 81/166 (48.80%), Postives = 110/166 (66.27%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPG-------------------YLYPNDDICEMY 147
            +GLGLSLI+NG+F+A  +N+  VLTLPD YGK +G AVEI+ S+ TC SF+CLLAGNL G+SVI+ ++F  +   +VF++G + + YT  GGL SVAYTDV QA+IG++G L VA W+++N +   PPPSIG P                    Y+YP+D    MY
Sbjct:  147 IGLGLSLILNGIFLAHKVNEELVLTLPDIYGKKYGKAVEIVTSICTCCSFLCLLAGNLVGMSVILAYIFDISEVGAVFLSGIICLAYTACGGLFSVAYTDVVQAAIGMIGCLSVAYWLINNAKEEAPPPSIGMPKTAAYTTVTSGTVANQDIGFYVYPDDATAAMY 312

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A7S2VEF1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VEF1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.970e-39
Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPND----DICEMYQVRLCM 153
            +GLG+SL+ING+F+A HIN   VLTLPD + K +G  VE+LVSL T  SFI LLAGNL G   I  +L+  +   +++IA  V  +YT  GGL SVAYTDV Q  IG  G +++A W + N ET  PPPSIGFPGY+YP++      C+MY    C+
Sbjct:  143 IGLGMSLLINGIFLAHHINNEEVLTLPDIFAKRYGKTVEVLVSLCTVCSFIMLLAGNLVGFGAITSYLWDISEEAAIWIAAIVIWMYTATGGLFSVAYTDVVQGVIGWSGCVVMAFWFIAN-ETEAPPPSIGFPGYIYPDNIGDGGTCDMYNGTACV 298

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: B7GCN8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCN8_PHATC)

HSP 1 Score: 147 bits (372), Expect = 3.460e-38
Identity = 75/151 (49.67%), Postives = 103/151 (68.21%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPND----DICEMY 147
            +GLGLSLI+NG+F+A H+N   VLTLPD + K +G  VEILVSL T  SF+ LLAGNL G   I  +++G +   +++IA  +  VYT +GGL SVAYTDV Q  +G  G +++A W + N E   PPPSIG+P Y+YP++     +C+MY
Sbjct:  161 IGLGLSLILNGIFLAHHVNNDEVLTLPDIFAKRYGKVVEILVSLTTICSFLMLLAGNLVGFGAITSYVWGISDTAAIWIAAGIVWVYTASGGLFSVAYTDVVQGLMGWSGCIVMAFWFIANEEPNAPPPSIGYPLYVYPDNIGDGGVCDMY 311

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BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Match: A0A7S3K6Q6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6Q6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.790e-37
Identity = 75/150 (50.00%), Postives = 103/150 (68.67%), Query Frame = 0

Query:    1 MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSFICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTDVAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPN---DDICEMY 147
            +GLGLSLI+NGLF+ARH+N+A +LTLPD + + +G A E++   +  VSF  LLAGNL G   I+ FLFG +L   + I+G +  +YT  GG+LSVAY+D+AQ+++G+ GL  VA W   N     PP SIGFPGY+YP+   D +C  Y
Sbjct:  144 LGLGLSLILNGLFLARHMNRAGLLTLPDLWARKYGKAAEVIGGSVCIVSFCALLAGNLVGCGTILAFLFGVSLKEGILISGILMFLYTVCGGILSVAYSDIAQSTLGISGLA-VAGWWCFNHGHKAPPDSIGFPGYIYPDSFGDRVCSKY 292

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9319.18321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZ40_ECTSI	5.770e-77	81.76	Solute:Sodium symporter family n=1 Tax=Ectocarpus ...	[more]
A0A6H5KJW0_9PHAE	2.430e-75	81.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZ36_ECTSI	9.580e-51	87.88	Solute:Sodium symporter family n=1 Tax=Ectocarpus ...	[more]
A0A8J6CCI3_DIALT	4.730e-43	52.70	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
A0A835YRZ9_9STRA	9.100e-42	53.38	Solute:Sodium symporter family n=1 Tax=Tribonema m...	[more]
K8FEG1_9CHLO	1.040e-41	51.70	Solute:Sodium symporter family n=1 Tax=Bathycoccus...	[more]
C1E525_MICCC	2.000e-41	48.80	Solute:Sodium symporter family n=2 Tax=Micromonas ...	[more]
A0A7S2VEF1_9STRA	4.970e-39	50.96	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
B7GCN8_PHATC	3.460e-38	49.67	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A7S3K6Q6_9STRA	5.790e-37	50.00	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038377	Sodium/glucose symporter superfamily	GENE3D	1.20.1730.10		coord: 1..124 e-value: 2.5E-17 score: 64.5
IPR001734	Sodium/solute symporter	PFAM	PF00474	SSF	coord: 4..117 e-value: 1.8E-12 score: 46.8
IPR001734	Sodium/solute symporter	PROSITE	PS50283	NA_SOLUT_SYMP_3	coord: 1..137 score: 16.409
None	No IPR available	PANTHER	PTHR43291	FAMILY NOT NAMED	coord: 1..126
None	No IPR available	PANTHER	PTHR43291:SF5	SODIUM/PROLINE SYMPORTER	coord: 1..126
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 120..165
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 101..119
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 33..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 90..100
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 56..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..32
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..89
None	No IPR available	TMHMM	TMhelix		coord: 34..56
None	No IPR available	TMHMM	TMhelix		coord: 95..117
None	No IPR available	TMHMM	TMhelix		coord: 63..85
IPR018212	Sodium/solute symporter, conserved site	PROSITE	PS00456	NA_SOLUT_SYMP_1	coord: 70..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9319	contig	L-elsbetiae_contig9319:4732..6355 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9319.18321.1	mRNA_L-elsbetiae_contig9319.18321.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig9319 4287..6587 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig9319.18321.1 ID=prot_L-elsbetiae_contig9319.18321.1|Name=mRNA_L-elsbetiae_contig9319.18321.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp
MGLGLSLIINGLFIARHINKARVLTLPDFYGKAWGPAVEILVSLLTCVSF
ICLLAGNLAGLSVIIRFLFGGALPTSVFIAGFVTMVYTGAGGLLSVAYTD
VAQASIGLVGLLIVAAWMLDNRETTHPPPSIGFPGYLYPNDDICEMYQVR
LCMSALLCARRVKSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038377	Na/Glc_symporter_sf
IPR001734	Na/solute_symporter
IPR018212	Na/solute_symporter_CS