prot_L-elsbetiae_contig930.18300.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig930.18300.1
Unique Nameprot_L-elsbetiae_contig930.18300.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length291
Homology
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: D7FRQ4_ECTSI (Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 1.860e-130
Identity = 219/273 (80.22%), Postives = 231/273 (84.62%), Query Frame = 0
Query:   21 MEDEWYSGGDTAVPAGAGGAIAATAGAAK-RSPYGDSFTPPTSQGGL-AGQQAYGAPGASMGGYGAAAGGGLRXXXXXXXXXXXXXXXXXXXMSV-EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            MEDEWYSG DT    G            + R+PYGDSFTPP+SQGG+ AGQQAYGAPGASMGG          XXXXXXXXXXXXX       ++ EDEEDY+NEPPLLEELGINFEHI SKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPI+LWKTTSVLGYCLLPVIGLAA+GIV DL+GN GHVL  VAVAWCT+SATRLFEEYL+MRRQRYLVAYPVGLLYACFVLITVY
Sbjct:   73 MEDEWYSGADTTDGTGXXXXXXXXXXXXQQRTPYGDSFTPPSSQGGIMAGQQAYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A6H5JG11_9PHAE (Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.870e-128
Identity = 218/275 (79.27%), Postives = 229/275 (83.27%), Query Frame = 0
Query:   19 PDMEDEWYSGGDTAVPAGAGGAIAATAGAAKR-SPYGDSFTPPTSQGGL-AGQQAYGAPGASMGGYGAAAGGGLRXXXXXXXXXXXXXXXXXXXMSV-EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            P MEDEWYSG DT    G               + YGDSFTPP+SQGG+ AGQQAYGAPGASMGG          XXXXXXXXXXXXX       ++ EDEEDY+NEPPLLEELGINFEHI SKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPI+LWKTTSVLGYCLLPVIGLAA+GIV DL+GN GHVL  VAVAWCT+SATRLFEEYL+MRRQRYLVAYPVGLLYACFVLITVY
Sbjct:   73 PIMEDEWYSGADTTDGTGXXXXXXXXXXXXXXXTTYGDSFTPPSSQGGIMAGQQAYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGVGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A835Z6H4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 4.100e-79
Identity = 116/172 (67.44%), Postives = 143/172 (83.14%), Query Frame = 0
Query:  119 YDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            +DNEPPLLEELGINFEHI +KT AV++PT++I+  YLD+TDLAGPLVF L FG CLLL GK HFGYIYGFG FGC A ++VLNL+G++PI+ W+TTSVLGYCLLPV+ L+A+GI  DL G  G  LA  AVAW   +AT+LFE+YLDMR QR+L+AYP+GLLY CFVL+ ++
Sbjct:   54 FDNEPPLLEELGINFEHIWAKTRAVLVPTRRIESAYLDETDLAGPLVFALVFGTCLLLAGKLHFGYIYGFGAFGCGALSLVLNLMGDRPIDAWRTTSVLGYCLLPVVLLSAVGIALDLSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 223 bits (567), Expect = 8.820e-70
Identity = 103/173 (59.54%), Postives = 132/173 (76.30%), Query Frame = 0
Query:  118 DYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            D+ NEPPLLEELGINF+HI  KTLAV++P K++    + D D+AGPL FCL  G CLLLTGK HFGYIYGFG+ GC+   ++LNL+ ++ I++++T S+LGYCLLP++ LAA  IV++LKG  G     V + WCTV+ATR  E  LDMR QRYLVAYP+ LLY+CF LITV+
Sbjct:    7 DFSNEPPLLEELGINFDHIWQKTLAVLVPVKELKQEIMVDADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMSDRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A7S2TR42_9EUKA (Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TR42_9EUKA)

HSP 1 Score: 219 bits (557), Expect = 3.390e-68
Identity = 108/181 (59.67%), Postives = 133/181 (73.48%), Query Frame = 0
Query:  112 SVEDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGE--KPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            S+ D  DYDNEPPLLEELGINF+HI+ KTLAV++PTK  D   + D D+AGPLVFCL  G CL+L  K HFGYIYGFG+ GC+    +LNL+ +  K I++++T S+LGYCLLP++GLAAL  V  LKG  G  L    V WCT++ATR  E  L MR QRYLVAYP+ LLY+CF LITV+
Sbjct:    4 SLSDLPDYDNEPPLLEELGINFDHIMQKTLAVLIPTKTPDHEIMIDADMAGPLVFCLLLGFCLMLRLKMHFGYIYGFGLIGCLGMYTILNLMSDPDKSIDIFRTISILGYCLLPIVGLAALSTVLSLKGYLGFGLTAFTVLWCTIAATRFVEATLGMRDQRYLVAYPLMLLYSCFALITVF 184          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A8K1CDX0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDX0_PYTOL)

HSP 1 Score: 215 bits (548), Expect = 2.670e-66
Identity = 105/179 (58.66%), Postives = 140/179 (78.21%), Query Frame = 0
Query:  115 DEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            D+E+Y+NEPPLLEELGINF+HI  KT +V+LPTK+I+ + LDD DLAGPLV+C  FG+CLLL  K HFGYIYGFG+  C+   +++NL+  ++ I++++  SVLGYCLLP+IGLAA+ I   ++  G AG  LA VA+ W T +A+R FE+ L M  Q+YL+AYPVGL+YACFVLITV+
Sbjct:   44 DDEEYENEPPLLEELGINFDHIWLKTQSVLLPTKQINEHILDDADLAGPLVYCFVFGMCLLLAAKVHFGYIYGFGVLSCVFMYLLMNLLSPDRAIDIYRVCSVLGYCLLPIIGLAAINIFVSVQKLGLAGFALATVAILWSTHTASRFFEKALYMSEQKYLIAYPVGLVYACFVLITVF 222          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: W7U1N9_9STRA (Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.670e-66
Identity = 108/175 (61.71%), Postives = 132/175 (75.43%), Query Frame = 0
Query:  116 EEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            EEDY  EPPLL ELGINF+HI  KT  V++P   +D + +DD DLAGPL F L FG+ LL+TGK HFGYIYGFG+ GCIA  +VLNL+  K I++W+  S+LGY LLPVIGLA LGI   LKG  G  LA + +AW T ++TRLFE+ L+M +QRYLVAYPV L+YA FVLITV+
Sbjct:   80 EEDYSMEPPLLVELGINFQHIWEKTKTVLMPLGSMDEHIMDDADLAGPLFFLLSFGIFLLMTGKVHFGYIYGFGVSGCIAMYLVLNLLSPKDIDVWRVCSILGYGLLPVIGLAFLGIAVSLKGGVGQGLATLTIAWSTYASTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 254          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A1V9YZW9_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.760e-65
Identity = 108/178 (60.67%), Postives = 139/178 (78.09%), Query Frame = 0
Query:  116 EEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGE-KPINLWKTTSVLGYCLLPVIGLAALGIVWDLKG--NAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            EEDYDNEPPLLEELG+NF HI +KTL+V+LPTK+I+ N LDDTDLAGPLVFC  FG CLLL+GK HFGYIYGFG+FG      ++NL+   + I++++  SVLGYCLLP+I LAA+ IV  +KG    G +LA+++V W T +ATR FE+ L M  QR+L+AYP  ++Y+CFVLITV+
Sbjct:  152 EEDYDNEPPLLEELGVNFNHIWTKTLSVLLPTKQINENILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGLFGWAFMWAIMNLLSPTRTIDVYRVCSVLGYCLLPIILLAAINIVISIKGLNYVGFLLAMLSVIWSTHTATRFFEKALHMSDQRFLIAYPTAMVYSCFVLITVF 329          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: K3WQV6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQV6_GLOUD)

HSP 1 Score: 209 bits (533), Expect = 1.190e-63
Identity = 104/179 (58.10%), Postives = 136/179 (75.98%), Query Frame = 0
Query:  115 DEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            D+EDY NEPPLLEELGINFEHI  KT +V+LP K+I+ + LDD DLAGPLVFC  FG+CLLL  K HFGYIYGFG+  C+   +++NL+  E+ I++++  SVLGYCLLP+IGLAA+ IV  +K  G  G  LA + + W T +A+R FE+ L M  Q+YL+AYP+ L+Y+CFVLITV+
Sbjct:   72 DDEDYSNEPPLLEELGINFEHIWLKTQSVLLPMKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVISCLFMYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSVKDLGLVGFGLASLCILWSTHTASRFFEKALYMTEQKYLIAYPIVLVYSCFVLITVF 250          
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Match: A0A0P1B150_PLAHL (Rab GTPase interacting factor, Golgi membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B150_PLAHL)

HSP 1 Score: 209 bits (532), Expect = 1.390e-63
Identity = 105/180 (58.33%), Postives = 136/180 (75.56%), Query Frame = 0
Query:  114 EDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIG-EKPINLWKTTSVLGYCLLPVIGLAALGIVWDLK--GNAGHVLALVAVAWCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY 290
            ED +++ NEPPLLEELGINF+HI +KT++V+LPTK+I+ + LDD DLAGPLVFC  FG+CLLL  K HFGYIYGFG+  CI   +++NL+  E+ I++++  SVLGYCLLP+IGLAA+ IV  +K  G  G  LA V   W T +A+R FE+ L M  Q+YLV YP  L+YACFVLITV+
Sbjct:   65 EDTDEFANEPPLLEELGINFDHIWAKTVSVLLPTKQINEHILDDADLAGPLVFCFLFGMCLLLAAKVHFGYIYGFGVLSCIFVYLLMNLLSPERTIDIYRVCSVLGYCLLPIIGLAAINIVVSVKDLGMVGFFLASVCTLWSTHTASRFFEKALYMTEQKYLVMYPTMLVYACFVLITVF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig930.18300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ4_ECTSI1.860e-13080.22Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JG11_9PHAE1.870e-12879.27Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835Z6H4_9STRA4.100e-7967.44Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S0DM30_9EUKA8.820e-7059.54Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]
A0A7S2TR42_9EUKA3.390e-6859.67Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641... [more]
A0A8K1CDX0_PYTOL2.670e-6658.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7U1N9_9STRA3.670e-6661.71Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A1V9YZW9_9STRA1.760e-6560.67Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
K3WQV6_GLOUD1.190e-6358.10Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B150_PLAHL1.390e-6358.33Rab GTPase interacting factor, Golgi membrane prot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 155..273
e-value: 1.1E-7
score: 31.7
NoneNo IPR availablePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 66..290
NoneNo IPR availablePANTHERPTHR21236:SF2PROTEIN YIPFcoord: 66..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 179..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 290..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..178
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 216..234
NoneNo IPR availableTMHMMTMhelixcoord: 160..178
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 272..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig930contigL-elsbetiae_contig930:15083..22319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig930.18300.1mRNA_L-elsbetiae_contig930.18300.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig930 15083..22319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig930.18300.1 ID=prot_L-elsbetiae_contig930.18300.1|Name=mRNA_L-elsbetiae_contig930.18300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp
SDTQVDAQLSTLALSLTGPDMEDEWYSGGDTAVPAGAGGAIAATAGAAKR
SPYGDSFTPPTSQGGLAGQQAYGAPGASMGGYGAAAGGGLRGGGGLGVGG
GGVGGGTVGGMSVEDEEDYDNEPPLLEELGINFEHILSKTLAVILPTKKI
DINYLDDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVL
NLIGEKPINLWKTTSVLGYCLLPVIGLAALGIVWDLKGNAGHVLALVAVA
WCTVSATRLFEEYLDMRRQRYLVAYPVGLLYACFVLITVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1