prot_L-elsbetiae_contig9281.18286.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9281.18286.1
Unique Nameprot_L-elsbetiae_contig9281.18286.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig9281.18286.1 vs. uniprot
Match: A0A6H5JUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR8_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.660e-24
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQ-EGLEGQKCEPLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAGL 90
            QTVKELVDNAID+CRCR S+Q+APTVRVVLRR +      E   E L+  + EPLELQVADNG GL DVT+A+ LFSS+KSGH    A G+
Sbjct:   27 QTVKELVDNAIDSCRCRASEQDAPTVRVVLRRSAAGATVAEGVVEDLDLDE-EPLELQVADNGAGLTDVTKAVGLFSSTKSGHTPPVAPGV 116
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BLAST of mRNA_L-elsbetiae_contig9281.18286.1 vs. uniprot
Match: D7FMM1_ECTSI (Topo-VIb_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM1_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.580e-23
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 0 
Query:    1 QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQ-EGLEGQKCEPLELQVADNGDGLNDVTQALVLFSSSKSGH 82
            QTVKELVDNAID+CRCRTS+Q+APTVRVVLRR +   A  E   E L+ ++ EPLELQVADNG GL DVT+AL LFSS+KSGH
Sbjct:    7 QTVKELVDNAIDSCRCRTSEQDAPTVRVVLRRAAAGAAVAEGVGEDLDLEE-EPLELQVADNGAGLTDVTKALGLFSSTKSGH 88
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9281.18286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUR8_9PHAE1.660e-2463.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMM1_ECTSI1.580e-2371.08Topo-VIb_trans domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 1..89
e-value: 3.7E-7
score: 31.9
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9281contigL-elsbetiae_contig9281:3967..4449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9281.18286.1mRNA_L-elsbetiae_contig9281.18286.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9281 3952..4449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9281.18286.1 ID=prot_L-elsbetiae_contig9281.18286.1|Name=mRNA_L-elsbetiae_contig9281.18286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
QTVKELVDNAIDACRCRTSDQEAPTVRVVLRRRSKNRADIEDQEGLEGQK
CEPLELQVADNGDGLNDVTQALVLFSSSKSGHGSLAAAGLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf