prot_L-elsbetiae_contig9281.18285.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9281.18285.1
Unique Nameprot_L-elsbetiae_contig9281.18285.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length75
Homology
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BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Match: D7FMM1_ECTSI (Topo-VIb_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM1_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.530e-31
Identity = 58/75 (77.33%), Postives = 65/75 (86.67%), Query Frame = 0 
Query:    1 MRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIVVPRGGREASPHLLVDNEDLVRAFAK 75
            MRLLVPG E+AL FA  RLKA F RMHLLPDR AGVSF CEGCLD+ S+ VPRGGR+ASPHLL+DN+DLV+AFAK
Sbjct:  176 MRLLVPGDEEALDFAAPRLKAFFTRMHLLPDRPAGVSFACEGCLDNMSVCVPRGGRDASPHLLLDNQDLVQAFAK 250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9281.18285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMM1_ECTSI3.530e-3177.33Topo-VIb_trans domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9281contigL-elsbetiae_contig9281:660..1578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9281.18285.1mRNA_L-elsbetiae_contig9281.18285.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9281 660..4449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9281.18285.1 ID=prot_L-elsbetiae_contig9281.18285.1|Name=mRNA_L-elsbetiae_contig9281.18285.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=75bp
MRLLVPGGEDALGFAESRLKALFARMHLLPDRAAGVSFVCEGCLDDTSIV
VPRGGREASPHLLVDNEDLVRAFAK
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