mRNA_L-elsbetiae_contig9270.18279.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9270.18279.1
Unique NamemRNA_L-elsbetiae_contig9270.18279.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 2.490e-140
Identity = 210/218 (96.33%), Postives = 212/218 (97.25%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQA 654
            VSDEK+GW PARILKESG SANVQLQNGSKKTVKRS KEPLWPLNHSSL R+EDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQ NAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQ 
Sbjct:    2 VSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQ-NAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQV 218
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 1.740e-135
Identity = 211/218 (96.79%), Postives = 213/218 (97.71%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQA 654
            VSDEK+GW PARILKESG SANVQLQNGSKKTVKRS KEPLWPLNHSSL R+EDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQ NAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQA
Sbjct:   59 VSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQ-NAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQA 275
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA)

HSP 1 Score: 330 bits (845), Expect = 2.670e-101
Identity = 169/219 (77.17%), Postives = 186/219 (84.93%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSA--NVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQ 651
            V+DEKEG+APAR+LK + G    NVQLQ+G+K++VK    EPLWPL  SSL R+EDDLVMVD IN GLM H LR RYRRD IYTWVGANHSVLVSINPFK LPIY PA I EYA+PSAYRLDPPHTFAIANSAF +L  E  SQA+LISGESGAGKTEATKQCF+FLAEVAGS  +AVEQRIL ANPVLE+FGNAKTLRNNNSSRFGRWTEVHFD + +
Sbjct:  165 VTDEKEGYAPARVLKGAPGDTTLNVQLQSGAKRSVKAGKGEPLWPLKPSSLTRVEDDLVMVDDINTGLMAHCLRARYRRDAIYTWVGANHSVLVSINPFKQLPIYGPAQIAEYARPSAYRLDPPHTFAIANSAFRRLALEGASQAVLISGESGAGKTEATKQCFSFLAEVAGSA-DAVEQRILCANPVLEAFGNAKTLRNNNSSRFGRWTEVHFDAQSR 382
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A7S1U0Y1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0Y1_9STRA)

HSP 1 Score: 287 bits (734), Expect = 3.440e-94
Identity = 142/214 (66.36%), Postives = 171/214 (79.91%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 642
            VSD+K  WAPAR+ K +   A+VQL +G  K + +S  EPLWPL  SSL  +EDDLVMVD +NQGLM+H LRERY +D IYTWVGANH+VL+S+NPFK LPIYS  T+ E++KP A R+ PPH FAIA++AF+ L     +QA+LISGESGAGKTEATKQ   +LAE+AGS+ N VEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct:   67 VSDQKVTWAPARVTKRTPEGAHVQLSSGRAKVIVKSAAEPLWPLKKSSLNHLEDDLVMVDDLNQGLMMHCLRERYGQDKIYTWVGANHTVLISVNPFKQLPIYSVETMNEFSKPGANRVPPPHVFAIAHNAFLALKIGARNQAVLISGESGAGKTEATKQVLAYLAEIAGSENN-VEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 279
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.610e-87
Identity = 140/214 (65.42%), Postives = 167/214 (78.04%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 642
            VSD K  WAPA++++++     VQL NG  K + +S  EPLWPL  SSL  +E+DLVMVD +NQGLM+H LRERY RD IYTWVGANH+VL+S+NPFK LPIYS  T+ E+AKP A R+  PH FAIA  +F  +  +  +QAILISGESGAGKTEATKQC  +LAE+AGS  N VEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct:   72 VSDPKVAWAPAKVVRKTSSGVEVQLGNGRPKVLTKSKAEPLWPLKKSSLNHLEEDLVMVDDLNQGLMMHCLRERYARDKIYTWVGANHTVLISVNPFKQLPIYSIETMSEFAKPGANRVQKPHVFAIAQDSFTHMKIQARNQAILISGESGAGKTEATKQCLAYLAEMAGSDNN-VEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 284
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: F0Y2B5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B5_AURAN)

HSP 1 Score: 274 bits (701), Expect = 8.270e-84
Identity = 140/222 (63.06%), Postives = 175/222 (78.83%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESG-GSANVQLQNGSKK-TVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYT----WVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKG 648
            V D+ E W PAR++ + G G+  VQ+++  K  T+K+S  +PLWPL  SSLGR+EDDLVM+D++NQ  MVH+L+ERY+ D IYT    WVGA+H+VLVSINPFK LPIY    + E+A+P+  RL PPH FA+AN A+++L  +  +QAILISGESGAGKTEATKQC +FLAEVAGS  N VEQR+L ANPVLE+FGNAKT+RNNNSSRFGRW EVHFD +G
Sbjct:   54 VRDDAEAWLPARVVSKLGQGTVKVQMRDSGKGLTLKQSDNQPLWPLTLSSLGRLEDDLVMLDSLNQAAMVHDLKERYKSDDIYTRVAVWVGASHTVLVSINPFKRLPIYGVNLMREFAEPAPNRLLPPHPFAVANGAYLRLRVDAENQAILISGESGAGKTEATKQCLSFLAEVAGSTNN-VEQRVLSANPVLEAFGNAKTVRNNNSSRFGRWMEVHFDNRG 274
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A6S8C1X6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C1X6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 5.950e-76
Identity = 125/218 (57.34%), Postives = 170/218 (77.98%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILK-ESGGSANVQLQN-GSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKG 648
            V DEKE W P R++K E+  +  V+++  G+K+  +    EPLWP++ SSL R+EDD+V++D +N  +M+H+++ERY++D IYTWVGA+ +VLVSINPFK LPIY    + E+A+P+  ++ PPH F++ANSA+++L  +   QA+LISGESGAGKTE TKQ  +FLAE+AGS  N VEQRIL ANPVLE+FGNAKT+RNNNSSRFGRW +VHFD +G
Sbjct:   41 VRDEKEVWLPGRVIKKETNDTLRVEIKGRGTKQLTRHVKNEPLWPVSLSSLNRLEDDMVLLDDLNDAMMIHDVKERYKKDQIYTWVGASQTVLVSINPFKRLPIYGIQMMNEFARPAPNKILPPHPFSVANSAYIRLRIQAQDQAMLISGESGAGKTETTKQILSFLAEIAGSSTN-VEQRILSANPVLEAFGNAKTVRNNNSSRFGRWMQVHFDERG 257
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: D8M5G1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M5G1_BLAHO)

HSP 1 Score: 213 bits (543), Expect = 5.920e-61
Identity = 105/218 (48.17%), Postives = 150/218 (68.81%), Query Frame = 1 
Query:    1 VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQA 654
            ++DE EGW P  +    G +   + ++G+  T K++     W    SSL  + DD+V+++  N+  +++ +R+RY    IYTWVG+N ++L+S+NPF+ LP+YSP  I  +A P   RL PPH + IA SAF +++ +   Q+ILISGESGAGKTEATKQC  F+AEVAGS  +++EQ++L  NPVLE+FGNAKT+RNNNSSRFG+W EVHF  +   
Sbjct:  122 IADEAEGWVPVCVESAKGSTITGRREDGTIVTSKQNGGTVQW----SSLRELPDDVVLLEDCNEPSILYTVRKRYMEGKIYTWVGSNKTILLSVNPFQNLPLYSPEQISLHANPPPNRLLPPHVYDIAYSAFQEMSVDGTDQSILISGESGAGKTEATKQCLGFIAEVAGSD-SSLEQKVLQTNPVLEAFGNAKTVRNNNSSRFGKWIEVHFSNRNHV 334
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A7S0D1G2_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D1G2_9EUKA)

HSP 1 Score: 202 bits (513), Expect = 4.390e-59
Identity = 107/210 (50.95%), Postives = 148/210 (70.48%), Query Frame = 1 
Query:   13 KEGWAPARILK-ESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFD 639
            KEG+ PA+++K +  G+  ++ +NG   TV +  K PL  L  S L R+  DLVM+D +N+ L+ +NL ERY+ + IYT +G   S+L+S+NP+K LP+Y+P  I  Y K    +  PPH F IA+ AF+ L +    Q+I+ISGESGAGKTE TKQC  +LAEVA S ++ +EQ+IL ANP+LE+FGNAKT+RNNNSSRFG++ EV FD
Sbjct:    2 KEGYTPAKLVKKQKSGNWELETENGQSLTVSKK-KLPLERLYWSHLKRVVQDLVMLDVLNRPLICYNLMERYKSNQIYTSIG---SILISLNPYKWLPLYTPEVISRYQKKRDSQ--PPHVFGIASDAFLNLWENVEGQSIVISGESGAGKTECTKQCLAYLAEVACSAESNIEQKILSANPILEAFGNAKTVRNNNSSRFGKYVEVFFD 205
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BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Match: A0A0L0DHZ6_THETB (Myosin VIIA n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DHZ6_THETB)

HSP 1 Score: 208 bits (529), Expect = 2.710e-58
Identity = 115/218 (52.75%), Postives = 155/218 (71.10%), Query Frame = 1 
Query:    7 DEKEGWAPARILKE-SGGSANVQLQNGSKKTVKRS--TKEPLWPLNHSSLGRIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQE---NVSQAILISGESGAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 642
            DE   + PA++L+  S GS ++QL+NG+K   ++S   K+ L PL  SSL R+ DDLV +D+I++G+++HNLRER+ +D IYT VG   ++L+S+NPFK L +Y+P  I+ Y       L PPH F IA+ A+ K+ +       Q++LISGESGAGKTEATKQ  ++LAE AGS  + VEQ IL ANP+LE+FGNAKTLRNNNSSRFG+W EV F P
Sbjct:   62 DEDAAYVPAKVLQAYSDGSMSLQLENGTKVEYRKSKKNKKDLVPLKKSSLQRLMDDLVQMDSIDEGMIIHNLRERFYKDKIYTNVG---TILISVNPFKGLGLYTPTVIDRYYHKGISTL-PPHVFQIADEAYRKMMEGIRGQTDQSVLISGESGAGKTEATKQVLSYLAETAGSV-SGVEQMILMANPILEAFGNAKTLRNNNSSRFGKWIEVFFTP 274
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9270.18279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G548_ECTSI2.490e-14096.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK5_9PHAE1.740e-13596.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C908_9STRA2.670e-10177.17P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1U0Y1_9STRA3.440e-9466.36Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7R9UA42_9STRA1.610e-8765.42Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
F0Y2B5_AURAN8.270e-8463.06Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6S8C1X6_9STRA5.950e-7657.34Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D8M5G1_BLAHO5.920e-6148.17Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A7S0D1G2_9EUKA4.390e-5950.95Hypothetical protein (Fragment) n=2 Tax=Amorphochl... [more]
A0A0L0DHZ6_THETB2.710e-5852.75Myosin VIIA n=1 Tax=Thecamonas trahens ATCC 50062 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9270contigL-elsbetiae_contig9270:148..4652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.9
Seed ortholog evalue8.9e-116
Seed eggNOG ortholog2880.D7G548
KEGG koko:K21868
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0015629,GO:0016459,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04812
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-00_008480.2
Exons5
Model size655
Cds size654
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9270.18279.1prot_L-elsbetiae_contig9270.18279.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9270 148..4651 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816998.68929-CDS-L-elsbetiae_contig9270:147..3391622816998.68929-CDS-L-elsbetiae_contig9270:147..339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 148..339 +
1691683972.0630715-CDS-L-elsbetiae_contig9270:147..3391691683972.0630715-CDS-L-elsbetiae_contig9270:147..339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 148..339 +
1622816998.701246-CDS-L-elsbetiae_contig9270:1943..20001622816998.701246-CDS-L-elsbetiae_contig9270:1943..2000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 1944..2000 +
1691683972.075579-CDS-L-elsbetiae_contig9270:1943..20001691683972.075579-CDS-L-elsbetiae_contig9270:1943..2000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 1944..2000 +
1622816998.7166505-CDS-L-elsbetiae_contig9270:2996..31731622816998.7166505-CDS-L-elsbetiae_contig9270:2996..3173Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 2997..3173 +
1691683972.0872662-CDS-L-elsbetiae_contig9270:2996..31731691683972.0872662-CDS-L-elsbetiae_contig9270:2996..3173Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 2997..3173 +
1622816998.7279115-CDS-L-elsbetiae_contig9270:3890..39801622816998.7279115-CDS-L-elsbetiae_contig9270:3890..3980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 3891..3980 +
1691683972.1011257-CDS-L-elsbetiae_contig9270:3890..39801691683972.1011257-CDS-L-elsbetiae_contig9270:3890..3980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 3891..3980 +
1622816998.7412324-CDS-L-elsbetiae_contig9270:4513..46511622816998.7412324-CDS-L-elsbetiae_contig9270:4513..4651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 4514..4651 +
1691683972.1118805-CDS-L-elsbetiae_contig9270:4513..46511691683972.1118805-CDS-L-elsbetiae_contig9270:4513..4651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9270 4514..4651 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9270.18279.1

>prot_L-elsbetiae_contig9270.18279.1 ID=prot_L-elsbetiae_contig9270.18279.1|Name=mRNA_L-elsbetiae_contig9270.18279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp
VSDEKEGWAPARILKESGGSANVQLQNGSKKTVKRSTKEPLWPLNHSSLG
RIEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKML
PIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGES
GAGKTEATKQCFNFLAEVAGSQQNAVEQRILHANPVLESFGNAKTLRNNN
SSRFGRWTEVHFDPKGQA
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mRNA from alignment at L-elsbetiae_contig9270:148..4652+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9270.18279.1 ID=mRNA_L-elsbetiae_contig9270.18279.1|Name=mRNA_L-elsbetiae_contig9270.18279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4505bp|location=Sequence derived from alignment at L-elsbetiae_contig9270:148..4652+ (Laminarionema elsbetiae ELsaHSoW15)
GTGAGCGACGAGAAGGAAGGCTGGGCACCCGCCCGCATCCTGAAGGAGTC
CGGGGGCTCTGCGAACGTGCAGCTGCAGAACGGGTCGAAGAAGACGGTGA
AGCGCTCCACGAAGGAGCCGCTGTGGCCGCTGAACCATTCCTCCCTGGGG
AGGATAGAGGACGATCTCGTGATGGTGGACGCGATCAACCAGGTGTGCAC
TAGCCTTCGCAAGTTTTTACTGGAATAAATCATATGGGATAAAGTATGGA
AATGGCTAATGGGGGTCAGCTTTTGGGTTGGGGTTAGGGTTACGGAACCG
CTGTCCATGGTAGTGTGTGTTGTGTGTTGTCTTCACAACATTAAAAACCG
TCCTGATCTCTCCATCCAGTAACTCTCAATGTCCGTACTGTACTAATCCA
ACACTTGATCCGGTCAATTCCCGTGGTCACAGGCTAACTTATACCCAAGA
AAAGGTAAACGAAAAATAAAATGGACCCGGAAGGGCCAGCAAAGCAATAA
TAAAACAGTCTATTGTTTCTTGTTTTTCCTAGAATTACAGGAATTACAGG
AATTCTTTGCGAAGGTGATCCGCTGCTTGTGGTGCTGGCATACCTTATAT
GGCATGTAGGTGACACAAGATACCACTACCGCCCCCTGGACCACCGACTT
TTAATAGAGCTCCGTTACTCCGTAACGAAGAAGGGTGTCAGCACCAAGCG
GCATAATTTTTTGAGACAGCCCTCGGCTGGATATTTCCAACCTCACTCCC
TTTTCGGCGCTGGCGCTCTTCTTGCTGGAGAGGAATGGAGCTCTGAAAAT
CTGTCCAGGGGGGAGGGGGGGGGTACCTTGTGTCACCTACGGTACCCGCT
CCGAGAGTGGGCAGGGGGAGAGACCGGGAGAGGGAGGAAGGGGAGACGGA
GAGAGAAGGGGGGGGGGGGGGGGGTTGGAGAAGAGAGAGAAATTGCGGAT
CTGCGAAACAAAAGATCCTCGCGGGAAAGTATCCCCGTGATGCAGATTTG
TGTTGACTAAATGTAAGCGTTTAGCATGATAAATGCGTATGTACGAGATT
AACAGCAGTAGAGGCAACTCGAAAAAAGTGGGACTGCCGATATCAAAAGA
GGTCCGAAAGAGATGCTACATGTAGCACACACAGGCACGCAGGCACACAT
GGAGTGAGAGAGAGGGAGTGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAG
AGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACA
CACACAGAGAGAGACAGAGAGATAGAGAGAGAGAAAAAAAGAGATAGCGC
TCATGGCACGCTCGTTGCCGCGCGCTGAATCGGTACAGCAGGTGGCAAAC
AAAAACACGATCTCCCGACCCAAGGAATCGATCGTGTTCGCAGGTCTCGC
GGCAGGGGGGCAAAGTAGATCACTGCTCTGTGTTGGCGCTACAAAACCAT
TTGTGTGAACTTGTCCGTGCCTTTAGCGGCCAGGCCTGGTCGAAACCCCG
TTCACCTCCTGTGCGCAGCAGCCGTCCGTCTTTCGCCGGACGCTCCTGGG
TATGCACAGATGATGATGCACACACCCCCACCTTTTCCTGGCTCGATGAC
GTAACTCTTGCCGCCGTTTCGACACCCCGCAGCCATTGCGTTGCATCGCG
GGGGGCCGTTTGATGGAGGAGGATGACGGTGGAACCTGAGTATTTTATGT
ATACAGATGATATGCGCATATTTACACACACCCCGCCCCACATTTTTCAT
GGTGCAATGACCCCCGACTCTTGCCACCGTTTGCGTCGCGCCGCAGGGGC
TCATGGTCCACAACCTGAGGGAGAGGTACCGCAGGGACCTTATCTACACC
TGGGTGAGCGACGACCCACGTAGATATCATGTCTATGATTTGCAGTGTTG
GTACACATGCTACAACATCACATGGCATACTTCAGACGACCCACGTTGTA
TGTATCATGATTGTGATTTGCAGCGTTAGTACATATGCTACAGACATACT
TCCTCTGTCCCATAAGTCTGTGCAGTTATGCTTTTGCTCCCCCTTAAGGG
TGTCCAATCTGTTCGTATGTTGTGTGTAGCTACACATGACACGGCTTTTC
ATCGCCTGCGGGGTTGTGTTCTGCATTGTATGATCATGTTGTGTGTAGCT
ACACATGACACGGCTTTTCATCGCCTGCGGGGTTGTGTTCTGCATTGTAT
GATCATGTTGTGTGTAGCTACACATGATACGACTTCTCATCGCCTGCGGG
GTTGTGCTCTGCATGTGTAGGATCATGTTGTGTGTAGCTACACATGGCAC
GACTTTTCATCGTCTGCGGGGTTGTGCTCTGCATGTGTAGGATCATGTTG
TGTATAGCTAAATACACATGACACGGCTTTTCATCGCCTGCAGGGTTTGC
TCTGCATGTGTAGGATCATGTTGTGTGTAGCTAGGTTGTGTTCTGCATTA
TATGATAATTGTTGTGTGTAGTTACACATGACACGACTTTTCATTGCCTG
CGGGGTTGTGCTCTGCATTGTATGATAATTGTTGTGTGTAGTTTACACAT
GACACGGCTTTTCATCGCCTGTCGGGTTGTGCTCTGCATGTTCATCAAAA
TGATCATGTTACGTGCACCGTAGGTGACATATGATAAGACACCCCCTGGA
CCGATTTTCAAAGCTCAAGTACTCCACAGCAAGCAGAGCGTCAGCCCAGA
AAAGGGCGGCGTTGGAAAGATCTCGCCGAGAGCTTTCCGACAATGTGGCG
TTTGTGGTTAGAATCGTAACCGTTGCGGAGTAACCAAGCTTTCAATATCG
ATCCAGGGGGTGTCTTATCTTATGTCACCTACGGTATGTTCCTATTTAGG
TCGGCGCGAACCACTCAGTGCTGGTCTCCATCAACCCGTTCAAGATGCTG
CCGATCTACTCCCCGGCCACCATCGAGGAGTACGCCAAGCCGTCGGCCTA
CCGGCTAGACCCGCCGCACACCTTCGCCATCGCCAACTCGGCCTTCATGA
AGCTCACCCAGGAGAACGTGTCTCAGGTCCGTACGAAGTATGTAGTAGAT
CTATACTTTTGCATCCAAGTTGCTGTTGTCTTCACATTAATAAAAACCGT
TCCGATCTCTCCATCCAGTACCTCCGTACGTCCGTACTATTGAAACACTC
GACGCGGTCGGTTCCTGTGGTCACAGGCTAACTTACCCGAAGAAAGGGTA
TATTACTATACGGAAGAATAGAAAGGTGGACCCAAAGGGTCAGTCAGCAA
AGCATAAAAACAAAAGAAACGACACAGATAGTCTGGAGCCCTTCGCTCCC
CTCTACAAGCTATGTGTGTGAGGTAAAAACAAAAACTGGAACATCCAAGT
ACACAATATGCTTCTATATATGTAGGCTATATACTTCTATAATATATGTG
GAGTGAATTTTGTTTTATATGTTTGTTTAATTTCTGGTTTTGGAGAGGGA
ATATTTACGCTTATATATTGAGATTATGCACATATAAAACATACATGCAC
GCTGGAGTGTTTCAGCGACACGCCGTCATTTAGTCGTCCTTGATCCGACT
CTCCTAATCCCCCCCCCCCCCTCCCCTTTTTTGGGGAAGTTTTTCGGCTC
CTCCTTAATATTGTGATATTGTGGCATGTCGGGCCATCCCCCATCCCCGT
CTCCGTTGTGAGTTGTTCCTGATCCCGACCTCTCCCTTCACTCCCGCACC
TTTGTCTTGACTCTGGGGGCTCCGCGGTGTGGCGGCACACCAGGCCATCC
TCATCTCCGGAGAATCCGGAGCGGGAAAGACGGAAGCCACCAAGCAGTGC
TTCAACTTCCTCGCTGAAGTCGCCGGCTCGCAGGTGGGAGGTCTTGGGGG
GCTCCGCTTGTCGCACTTTATCACGAGGGGTGGGGGGGAGGCGTGTCTGT
ATTTTGTTCAGAGCGGCGACGGGCAGGTGTGGCCAACGAAAACGAAAACG
AAAACGAAAATATCTACGAATAGCCAGCCCTTGTGACTCTTTTCGAAGGC
TCGGCGTCTTTTCGAAGGCTCGGTGTAGGCGGCTAGGCTAGGCTCGGCCA
GGCCAGCCTGTGGCGTTTGGCTTTCAAAACATGGAACTGGAACTCCGCAC
GTCCAATTTTCAGTTATCACTCATTCAATCCACCCCATGCAATCCACGGC
CGGTGGGTGCGCGTTCGATCTCGTCTTTTGTGTGCTCTTCGCGGATGCTC
TTGGTTTGTTTCTGCTTTGGCGGCGGAAACGGAAACGGACACGGAACGGA
AATGGAAATGGACACGGAAATGGAAACGGAAACGGAAACTTAAACGGAAA
TGGAAATGGAAATGGACACGGAAACGGAAACGGAAACGGAAACGGAAACG
GAAACCCTAAACGGAGCAGAACGCGGTCGAGCAGCGCATCCTCCACGCCA
ACCCCGTGCTCGAATCGTTCGGCAACGCGAAGACTCTGAGGAACAACAAC
TCCTCCCGCTTCGGCCGCTGGACAGAGGTTCACTTCGACCCCAAGGGCCA
GGCAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9270:148..4652+

>mRNA_L-elsbetiae_contig9270.18279.1 ID=mRNA_L-elsbetiae_contig9270.18279.1|Name=mRNA_L-elsbetiae_contig9270.18279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig9270:148..4652+ (Laminarionema elsbetiae ELsaHSoW15)
GTGAGCGACGAGAAGGAAGGCTGGGCACCCGCCCGCATCCTGAAGGAGTC
CGGGGGCTCTGCGAACGTGCAGCTGCAGAACGGGTCGAAGAAGACGGTGA
AGCGCTCCACGAAGGAGCCGCTGTGGCCGCTGAACCATTCCTCCCTGGGG
AGGATAGAGGACGATCTCGTGATGGTGGACGCGATCAACCAGGTGAGCGA
CGAGAAGGAAGGCTGGGCACCCGCCCGCATCCTGAAGGAGTCCGGGGGCT
CTGCGAACGTGCAGCTGCAGAACGGGTCGAAGAAGACGGTGAAGCGCTCC
ACGAAGGAGCCGCTGTGGCCGCTGAACCATTCCTCCCTGGGGAGGATAGA
GGACGATCTCGTGATGGTGGACGCGATCAACCAGGGGCTCATGGTCCACA
ACCTGAGGGAGAGGTACCGCAGGGACCTTATCTACACCTGGGGGCTCATG
GTCCACAACCTGAGGGAGAGGTACCGCAGGGACCTTATCTACACCTGGGT
CGGCGCGAACCACTCAGTGCTGGTCTCCATCAACCCGTTCAAGATGCTGC
CGATCTACTCCCCGGCCACCATCGAGGAGTACGCCAAGCCGTCGGCCTAC
CGGCTAGACCCGCCGCACACCTTCGCCATCGCCAACTCGGCCTTCATGAA
GCTCACCCAGGAGAACGTGTCTCAGGTCGGCGCGAACCACTCAGTGCTGG
TCTCCATCAACCCGTTCAAGATGCTGCCGATCTACTCCCCGGCCACCATC
GAGGAGTACGCCAAGCCGTCGGCCTACCGGCTAGACCCGCCGCACACCTT
CGCCATCGCCAACTCGGCCTTCATGAAGCTCACCCAGGAGAACGTGTCTC
AGGCCATCCTCATCTCCGGAGAATCCGGAGCGGGAAAGACGGAAGCCACC
AAGCAGTGCTTCAACTTCCTCGCTGAAGTCGCCGGCTCGCAGGCCATCCT
CATCTCCGGAGAATCCGGAGCGGGAAAGACGGAAGCCACCAAGCAGTGCT
TCAACTTCCTCGCTGAAGTCGCCGGCTCGCAGCAGAACGCGGTCGAGCAG
CGCATCCTCCACGCCAACCCCGTGCTCGAATCGTTCGGCAACGCGAAGAC
TCTGAGGAACAACAACTCCTCCCGCTTCGGCCGCTGGACAGAGGTTCACT
TCGACCCCAAGGGCCAGGCACAGAACGCGGTCGAGCAGCGCATCCTCCAC
GCCAACCCCGTGCTCGAATCGTTCGGCAACGCGAAGACTCTGAGGAACAA
CAACTCCTCCCGCTTCGGCCGCTGGACAGAGGTTCACTTCGACCCCAAGG
GCCAGGCA
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