mRNA_L-elsbetiae_contig9263.18275.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9263.18275.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE) HSP 1 Score: 346 bits (887), Expect = 4.560e-115 Identity = 163/238 (68.49%), Postives = 196/238 (82.35%), Query Frame = 1 Query: 223 MPFMRPSSRKMLDLTTEQAEALEKWDVECAGKHLAAIKDSVTTHDNLHQFTLAEDENTLNELELVGLMGAPGVFDDLNQRCRVAFTDRKRLIFTQANHSAEIGLPKMRCLVSLMTCCHNYWSFRKWSSYYASINASEVLQVFVQQTMTTTYQTAPCNFNDFYDFLTCAKGGTLYTEKNIDCATQTLGDNDPGGCTSRWDKTRFIRHALVIRYVDCASNSVKETVAMAQPSTPAPKLYE 936 MP + PSSRKML +T+ A LE+WD+ECA KHL AIKDSVTTHD+LH+FTL + E +N L+L GL+ APG+FDDL QRCRV FT++KRLIFTQANHSA +GLPKMRCL SL+TCCH+ WS R W++Y A+INASEVLQVFV Q ++T+YQT+ C FND +FL C GG++Y+EK+ID TQTLGD+DPG C SRWDKTRF+RHALVIRYVDCAS+SV ET AMA PS PA +LYE Sbjct: 1 MPQIDPSSRKMLQMTSGVAADLEEWDIECATKHLDAIKDSVTTHDDLHEFTLMKGEKVVNALDLAGLVDAPGLFDDLTQRCRVVFTNKKRLIFTQANHSAVVGLPKMRCLASLLTCCHDRWSRRTWTAYCATINASEVLQVFVHQELSTSYQTSTCTFNDILEFLCCPTGGSMYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYE 238
BLAST of mRNA_L-elsbetiae_contig9263.18275.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI) HSP 1 Score: 290 bits (742), Expect = 6.230e-92 Identity = 154/279 (55.20%), Postives = 179/279 (64.16%), Query Frame = 1 Query: 103 GAVPGLADGTFFFTNDYLFTADQLDRQKEGLVSRPP-FDPNMPFMRPSSRKMLDLTTEQAEALEKWDVECAGKHLAAIKDSVTTHDNLHQFTLAEDENTLNELELVGLMGAPGVFDDLNQRCRVAFTDRKRLIFTQANHSAEIGLPKMRCLVSLMTCCHNYWSFRKWSSYYASINASEVLQVFVQQTMTTTYQTAPCNFNDFYDFLTCAKGGTLYTEKNIDCATQTLGDNDPGGCTSRWDKTRFIRHALVIRYVDCASNSVKETVAMAQPSTPAPKLYE 936 GA D +FFT+ Y FTA Q DR++E L+ DP M + PSSRKML +T+ A LEKWD+ECA KHL AIKDSVTTHD+LHQFT + E +N L+L GL APGVFD++ QRCRV FT++KRLIFTQ VLQVFVQQ +TT+YQT+ C FND DFL C GGT+Y+EKNI TQTLGD+DPG C SRWDKTR +RHALVIRYVDCASNSVKET AMA PS PA +LYE Sbjct: 92 GAPAAEVDEAYFFTDVYPFTAAQFDRERENLLGHHTGLDPKMAQIDPSSRKMLQMTSGVAADLEKWDIECARKHLDAIKDSVTTHDDLHQFTFMKGEKVVNALDLAGLEEAPGVFDEVTQRCRVVFTNKKRLIFTQ------------------------------------------VLQVFVQQKLTTSYQTSTCTFNDILDFLCCPTGGTMYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYE 328
BLAST of mRNA_L-elsbetiae_contig9263.18275.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI) HSP 1 Score: 268 bits (684), Expect = 5.420e-85 Identity = 125/183 (68.31%), Postives = 150/183 (81.97%), Query Frame = 1 Query: 388 ENTLNELELVGLMGAPGVFDDLNQRCRVAFTDRKRLIFTQANHSAEIGLPKMRCLVSLMTCCHNYWSFRKWSSYYASINASEVLQVFVQQTMTTTYQTAPCNFNDFYDFLTCAKGGTLYTEKNIDCATQTLGDNDPGGCTSRWDKTRFIRHALVIRYVDCASNSVKETVAMAQPSTPAPKLYE 936 E+ +N L+L G+ APG++D + Q+CRV FT+ KRL+FTQANHSAE+GLPKM CL SL+TC H+ WS RKW+SYYASI ASEVLQVFVQQT+TT+YQT+ C F DF D L C GGTL +EK+I+ TQTLGD+DPG C +RWDKTRF+RHALVIRY+DCASNSV+ET MA STPA KLYE Sbjct: 4 EHAVNVLDLAGMEDAPGLYDTVTQQCRVVFTNEKRLVFTQANHSAEVGLPKMNCLASLLTCFHDRWSRRKWTSYYASIKASEVLQVFVQQTLTTSYQTSTCTFTDFLDVLCCPTGGTLKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYE 186 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9263.18275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9263.18275.1 >prot_L-elsbetiae_contig9263.18275.1 ID=prot_L-elsbetiae_contig9263.18275.1|Name=mRNA_L-elsbetiae_contig9263.18275.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp ISAAATAWPAVSGDKRFAPPSVQEYVAPDHTVGGGAVPGLADGTFFFTNDback to top mRNA from alignment at L-elsbetiae_contig9263:3138..6335- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9263.18275.1 ID=mRNA_L-elsbetiae_contig9263.18275.1|Name=mRNA_L-elsbetiae_contig9263.18275.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3198bp|location=Sequence derived from alignment at L-elsbetiae_contig9263:3138..6335- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9263:3138..6335- >mRNA_L-elsbetiae_contig9263.18275.1 ID=mRNA_L-elsbetiae_contig9263.18275.1|Name=mRNA_L-elsbetiae_contig9263.18275.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig9263:3138..6335- (Laminarionema elsbetiae ELsaHSoW15)back to top |