prot_L-elsbetiae_contig9260.18273.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9260.18273.1
Unique Nameprot_L-elsbetiae_contig9260.18273.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length238
Homology
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.240e-24
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRD VTEMHKVFDWAQASRKGL L
Sbjct:  363 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASRKGLLL 417          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.610e-23
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRD VTEMHK+FDWAQAS KGL L
Sbjct:  349 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASNKGLLL 403          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S2Y4I1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4I1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.080e-22
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLA+HSGLEYAI+TGGD+APLGRD VTE+HK+FDWA AS KGL L
Sbjct:    3 PGTGKTLFAKGLAKHSGLEYAILTGGDVAPLGRDAVTEIHKLFDWANASNKGLLL 57          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S2WW12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW12_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.450e-22
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLARHSGLEYAI+TGGD+APLGRD VTE+HKVF+WA AS +GL L
Sbjct:   15 PGTGKTLFAKGLARHSGLEYAILTGGDVAPLGRDAVTEIHKVFEWANASNRGLLL 69          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S1G0B3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0B3_9STRA)

HSP 1 Score: 103 bits (257), Expect = 9.950e-22
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLARHSGLEYAI+TGGDIAPLGRD VTE+HK+FDWA+ SR+GL L
Sbjct:  355 PGTGKTLFAKGLARHSGLEYAILTGGDIAPLGRDAVTELHKLFDWAKTSRRGLLL 409          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S2ME04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME04_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.340e-21
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLA+HSGLEYAI+TGGD+APLGRD VTE+HKVFDWAQ SR+G+ L
Sbjct:  343 PGTGKTLFAKGLAKHSGLEYAILTGGDVAPLGRDAVTEIHKVFDWAQTSRRGVLL 397          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: D7FW02_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW02_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 3.760e-21
Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKTLFAKGLARHSGL+YAI+TGGD+APLGR+ V+EMHK+FDWAQASR+G+ L
Sbjct:  372 PGTGKTLFAKGLARHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRRGVLL 426          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7R9ZQD9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQD9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.630e-21
Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKT+FA+GLA HSGL+YA++TGGDIAPLGRD VTE+HK+FDWA+ SR+GL L
Sbjct:   27 PGTGKTMFARGLAHHSGLDYAVLTGGDIAPLGRDAVTELHKLFDWAKTSRRGLLL 81          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S2BQU8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQU8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.780e-21
Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSLV 59
            PGTGKTLFAK LA+HSGL+YAIMTGGD+APLGRD VTE+HKVF+WAQAS KGL L+
Sbjct:  316 PGTGKTLFAKSLAKHSGLDYAIMTGGDVAPLGRDGVTEIHKVFEWAQASNKGLLLL 371          
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Match: A0A7S4SE67_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SE67_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.670e-21
Identity = 43/55 (78.18%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    4 PGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQASRKGLSL 58
            PGTGKT+FAKGLA+HSGLE+AI+TGGDIAPLGR+ VTE+HK+F+WA+ SRKGL L
Sbjct:   46 PGTGKTMFAKGLAQHSGLEFAILTGGDIAPLGREAVTELHKLFEWAKTSRKGLLL 100          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9260.18273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJ37_9PHAE2.240e-2496.36AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YR91_9STRA2.610e-2392.73AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2Y4I1_9STRA1.080e-2283.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WW12_9STRA1.450e-2283.64Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1G0B3_9STRA9.950e-2285.45Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2ME04_9STRA1.340e-2183.64Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
D7FW02_ECTSI3.760e-2181.82AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R9ZQD9_9STRA4.630e-2176.36Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2BQU8_9STRA5.780e-2182.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4SE67_9STRA8.670e-2178.18Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039188ATPase family AAA domain-containing protein 3PANTHERPTHR23075PUTATIVE ATP-ASEcoord: 3..56
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9260contigL-elsbetiae_contig9260:2424..7081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9260.18273.1mRNA_L-elsbetiae_contig9260.18273.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9260 2350..7200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9260.18273.1 ID=prot_L-elsbetiae_contig9260.18273.1|Name=mRNA_L-elsbetiae_contig9260.18273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MVRPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDTVTEMHKVFDWAQ
ASRKGLSLVRRRGGRVPKAAQHGDHQRGPPQRPERLPLPHGRVHGQVYAG
VRVESAGAVRLGGKLPDRRDGALRPPRPRRAAAQYEPLHEGLPPGPSRQG
QGHHGGRGGGLLPAGSGGPDGGLLGARHRQACHRVAGGGVRHERLLLHGR
AHDGSFGCAPAAEETEAGVTRGGADQLGGVEYAHPPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039188ATAD3
IPR027417P-loop_NTPase