prot_L-elsbetiae_contig925.18265.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig925.18265.1
Unique Nameprot_L-elsbetiae_contig925.18265.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length256
Homology
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 3.090e-109
Identity = 187/200 (93.50%), Postives = 197/200 (98.50%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAEGDE 221
            MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQ+VFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMV +LGDQPQDVLRGAADEVLAWLKD+SLTDHKR++GVE+ILGKM  +RFHKLV+LGKSITDFSAEG++
Sbjct:    1 MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQKVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMVASLGDQPQDVLRGAADEVLAWLKDESLTDHKRQEGVEEILGKMRPERFHKLVSLGKSITDFSAEGED 200          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: A0A835YNN3_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.100e-55
Identity = 112/200 (56.00%), Postives = 156/200 (78.00%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKR-----SRMQRVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFS 216
            MAE+  RN+ FEYKANSNLVL A+R  +RRGE+GTGEVESL G+ K  KMGDRL     PELE + +K++AKRER   GEE+    +     S+ Q+VFVAG G+TVLTET+E+DSINYRPKT++S+ AYEE+++ +  +LG QPQD++RGAA+E+L+ LKDD++ D +R+  +E +LGK+ +++F++LVN+GK ITDF+
Sbjct:    1 MAEEHARNRQFEYKANSNLVLQAER-GKRRGEDGTGEVESLWGKTKHMKMGDRLTTARPPELETKLQKAKAKRER---GEEEALKSKALETASKRQKVFVAGTGATVLTETQEMDSINYRPKTRESKAAYEELMAYVQVSLGAQPQDIMRGAAEEILSILKDDTMKDTQRQADIEKLLGKVKSEKFNELVNVGKRITDFN 196          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: W7TFU8_9STRA (U5 small nuclear ribonucleoprotein helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFU8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.770e-42
Identity = 104/209 (49.76%), Postives = 145/209 (69.38%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRDS--RRRGEEGTGEVESL-HGRMKGQKMGDRLDKGNK--PELEERKKKSQAKRERKATGEEQE------RNKRSRMQRVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAEG 219
            M+ +  + K ++Y ANSNLVL ADR    RRR +E TGEVE     ++ G++MGDR+  G    PE+EER ++S+ KRER+  G E        R K S+ + VF AG+G+TVLTETE L++INYRP+  +S+ AYEE+L  + G +GDQPQD+LRGAADEVLA LKD+SLTD +R   ++ ++ K++ ++F+KLV LGK I DF+  G
Sbjct:    1 MSLEFEQQKKYDYTANSNLVLEADRGEGGRRRHDEATGEVEVWDEKKLSGKRMGDRVGGGRTRAPEVEERLQRSKEKRERELRGLEGGKKIAGGRTKESK-KGVFSAGRGATVLTETEALEAINYRPRHPESKRAYEEMLGLIKGNIGDQPQDILRGAADEVLAILKDESLTDPRRLTEIQKLIRKLSPEKFNKLVTLGKGIHDFNTGG 208          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: UPI00081181E8 (putative U5 small nuclear ribonucleoprotein 200 kDa helicase n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI00081181E8)

HSP 1 Score: 149 bits (375), Expect = 2.010e-40
Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAE 218
            MA+ A R   +EYKANSNLVL AD     R R +E TGEV SL G+++G +MGDR  +    ++EERK K               R KR   Q  F   KG+T+L+E  +E+  I YRPKT+++R  YE +LS +  ALGDQP+D+L GAADE+LA LK+D L D +RK  ++ +LG +T +RF  LVNLGK ITDF ++
Sbjct:    1 MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVVSLVGKLEGTRMGDRYQRTKPEKMEERKAK---------------RQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEILAVLKNDKLKDRERKREIDSLLGSVTDERFALLVNLGKKITDFGSD 185          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: UPI00193C8CFD (putative U5 small nuclear ribonucleoprotein 200 kDa helicase n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193C8CFD)

HSP 1 Score: 147 bits (371), Expect = 1.620e-39
Identity = 97/200 (48.50%), Postives = 123/200 (61.50%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAE 218
            MA+ A R   +EYKANSNLVL AD     RRR +E TGEV SL GR+ G +MGDR  +    + EERK K               R KR   Q  F   KG+T+L+E  +E+  I YRPKT+++R  YE +LS +  ALGDQP+D+L GAADEVLA LK+D L + ++K   E +LG +  +RF  LVNLGK ITDF  E
Sbjct:    1 MADAAARQLQYEYKANSNLVLQADVRLIERRRRDEATGEVMSLVGRLDGTRMGDRFQRTKPVKAEERKVK---------------RQKRDEAQYDFARMKGATLLSEGVDEMVGILYRPKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEVLAVLKNDRLKEREKKVETESLLGGLAEERFALLVNLGKKITDFGTE 185          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: F0Y9C7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9C7_AURAN)

HSP 1 Score: 155 bits (393), Expect = 1.780e-39
Identity = 94/198 (47.47%), Postives = 130/198 (65.66%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRDSRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILG-KMTADRFHKLVNLGKSITDFSAE 218
            MAE+  RN+ +EY+ANSNLVL ADR++RRR +E TGEVESL G+M GQKMGD+L +   P+LEE+ ++++A RE++  G+ +E  +  R +R    G             S  Y PKTK++R AYE +L+ + GA+GD P+DVLRGAADEVL  LKDD + D  +   +E + G K+  +RF  LV LGK I DF  +
Sbjct:    1 MAEEFARNRQYEYRANSNLVLEADRENRRRTDEPTGEVESLFGKMGGQKMGDKLGRNKAPDLEEKARRAKASREKRQRGDAEEHTRGKRKRRSGAEGDDGG--------SSGAYEPKTKEARGAYEAILAGVRGAMGDVPRDVLRGAADEVLYTLKDDRVKDPDKHVQLERLFGAKVAPERFAALVALGKQIVDFGLD 190          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: UPI001EE5D45A (LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like n=3 Tax=Haliotis TaxID=6452 RepID=UPI001EE5D45A)

HSP 1 Score: 155 bits (392), Expect = 2.410e-39
Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAE 218
            MA+ A R+  +EYKANSNLVL  DR    RR  +E TGEV SL G++ G +MGDR  K   P++EERK K               R KR   QR  +  KG+T+L+E  +++  I YRPKT ++R  YE +LS +  A+GDQP+DVL GAADEVLA LK+D + D +RK  VE +LG M  +RF  LVNLGK ITD+  E
Sbjct:    1 MADAAARSLQYEYKANSNLVLQVDRSLIDRRARDESTGEVMSLVGKITGTRMGDRAQKTKPPQMEERKNK---------------RRKRDEAQRDMIKMKGTTLLSEGIDQMVGILYRPKTTETRQTYEVLLSFIQAAIGDQPRDVLCGAADEVLAVLKNDRMKDRERKREVEGLLGNMAEERFALLVNLGKKITDWGQE 185          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: A0A2R2MMN6_LINUN (U5 small nuclear ribonucleoprotein 200 kDa helicase-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MMN6_LINUN)

HSP 1 Score: 152 bits (383), Expect = 2.630e-39
Identity = 98/200 (49.00%), Postives = 126/200 (63.00%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAE 218
            MA+ A R   +EYKANSNLVL  DR    RR  +E TGEV SL G++ G KMGD+  +   P++EERK K               R KR   QR  +  KG ++L+E  +E+  I YRPKT ++R  YE +LS M  ALGDQP+DVL GAADEVLA LK+D + D +RK  VE +LG+M  +RF  LVNLGK I+D+ +E
Sbjct:    1 MADAAARQLQYEYKANSNLVLQVDRSLIDRRARDEATGEVMSLVGKLVGTKMGDKSMRTKPPQMEERKAK---------------RRKRDEAQRDMLKMKGQSLLSEGIDEMVGILYRPKTPETRQTYEVLLSIMQSALGDQPRDVLCGAADEVLAVLKNDRMKDKERKKEVEALLGEMQEERFALLVNLGKKISDWGSE 185          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: K1RGJ6_CRAGI (Uncharacterized protein n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1RGJ6_CRAGI)

HSP 1 Score: 145 bits (367), Expect = 3.880e-39
Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAE 218
            MA  A R   +EYKANSNLVL ADR    +R  +E TGEV SL G++ G +MG++  +   P++EERK K               R KR   QR  +  KG+T+L+E  ++   I YRPKT+++R  YE +LS +  ALGDQP+DVL GAADEVL  +K+D L D +RK  VE++LG +  +RF  LVNLGK ITD+  E
Sbjct:    1 MAGAAARALQYEYKANSNLVLQADRSLIEKRARDEPTGEVTSLVGKIAGTRMGEKAMRSKPPQMEERKVK---------------RTKRDEAQRDMMKMKGATLLSEGIDDFVGIVYRPKTQETRQTYEVILSFIQAALGDQPRDVLCGAADEVLQVMKNDRLKDKERKKEVEELLGGLAEERFAVLVNLGKKITDWGQE 185          
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Match: A0A0S7FJZ0_9TELE (U520 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FJZ0_9TELE)

HSP 1 Score: 145 bits (365), Expect = 1.230e-38
Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 0
Query:   22 MAEDAVRNKIFEYKANSNLVLTADRD--SRRRGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATGEEQERNKRSRMQRVFVAGKGSTVLTE-TEELDSINYRPKTKQSRIAYEEVLSTMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTADRFHKLVNLGKSITDFSAEGD 220
            MA+   RN  +EYKANSNLVL ADR    R R +E TGEV SL G+++G KMGD+  +    +LEER+ K               R KR   +      KG T+L+E  +E+  I Y+PKTK++R  YE +LS +  ALGDQP+D+L GAADEVLA LK+D + D +R+  VE +LG     R+H LVNLGK ITD+  + D
Sbjct:    1 MADVTARNLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTKMGDKAQRTKPQKLEERRDK---------------RRKRDEDRHDINKMKGFTLLSEGIDEMVGIVYKPKTKETRETYEVLLSFIHAALGDQPRDILCGAADEVLAVLKNDKMRDKERRREVEQLLGPSDDTRYHVLVNLGKKITDYGGDKD 187          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig925.18265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW4_ECTSI3.090e-10993.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNN3_9STRA2.100e-5556.00Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
W7TFU8_9STRA3.770e-4249.76U5 small nuclear ribonucleoprotein helicase n=3 Ta... [more]
UPI00081181E82.010e-4047.50putative U5 small nuclear ribonucleoprotein 200 kD... [more]
UPI00193C8CFD1.620e-3948.50putative U5 small nuclear ribonucleoprotein 200 kD... [more]
F0Y9C7_AURAN1.780e-3947.47Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
UPI001EE5D45A2.410e-3949.00LOW QUALITY PROTEIN: U5 small nuclear ribonucleopr... [more]
A0A2R2MMN6_LINUN2.630e-3949.00U5 small nuclear ribonucleoprotein 200 kDa helicas... [more]
K1RGJ6_CRAGI3.880e-3947.00Uncharacterized protein n=1 Tax=Crassostrea gigas ... [more]
A0A0S7FJZ0_9TELE1.230e-3846.53U520 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 31..254
NoneNo IPR availablePANTHERPTHR24075:SF13U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASEcoord: 31..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig925contigL-elsbetiae_contig925:21013..27268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig925.18265.1mRNA_L-elsbetiae_contig925.18265.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig925 21013..27268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig925.18265.1 ID=prot_L-elsbetiae_contig925.18265.1|Name=mRNA_L-elsbetiae_contig925.18265.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp
ARQPRRTRLPSTCVRGKRVATMAEDAVRNKIFEYKANSNLVLTADRDSRR
RGEEGTGEVESLHGRMKGQKMGDRLDKGNKPELEERKKKSQAKRERKATG
EEQERNKRSRMQRVFVAGKGSTVLTETEELDSINYRPKTKQSRIAYEEVL
STMVGALGDQPQDVLRGAADEVLAWLKDDSLTDHKRKDGVEDILGKMTAD
RFHKLVNLGKSITDFSAEGDEDKDKDKEDRDQDEEHEKLDEDMGVAVVFD
DDDDKD
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