mRNA_L-elsbetiae_contig925.18262.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig925.18262.1
Unique NamemRNA_L-elsbetiae_contig925.18262.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: D7FQ12_ECTSI (Alkaline phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ12_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 1.070e-107
Identity = 162/184 (88.04%), Postives = 176/184 (95.65%), Query Frame = 1 
Query:    1 RMPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMALDFEDG 552
            +MPWAGLVKTYN NAQTPDSAGTATAMN+GHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKA+NKKVGVVS+ARITHATPAGVYARSVDRN+EADVPEGCTEQVDIAQQ LL+SMVGDD WVDFAAGGG+ +FYN+TE+DA GE G+R+DGR+LIAEA  AGVMTAQT+DEFMALDFEDG
Sbjct:   86 KMPWAGLVKTYNVNAQTPDSAGTATAMNSGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAMNKKVGVVSSARITHATPAGVYARSVDRNYEADVPEGCTEQVDIAQQ-LLLSMVGDDGWVDFAAGGGKASFYNATELDAMGESGNRVDGRDLIAEASTAGVMTAQTKDEFMALDFEDG 268
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A2G6CFR4_9RHOB (Alkaline phosphatase n=2 Tax=Rhodobacterales bacterium TaxID=1948890 RepID=A0A2G6CFR4_9RHOB)

HSP 1 Score: 189 bits (481), Expect = 9.780e-55
Identity = 106/178 (59.55%), Postives = 120/178 (67.42%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMAL 537
             P+  L KTYN NAQTPDSAGTATAM +G KTKAGVIGV EDV+RGDC+TLPGNE+  + +   A+ K  GVVSTARITHATPA  YA SVDRNFE  +PEGCTEQ DIA Q L     G    VD A GGGRRNF  S   D  G+ G R  G NL+   ++AGV  A  +  F AL
Sbjct:   92 FPYLALAKTYNVNAQTPDSAGTATAMMSGVKTKAGVIGVDEDVVRGDCTTLPGNEVATMNEIMSAMGKATGVVSTARITHATPATGYAHSVDRNFEYKLPEGCTEQADIATQLLEAMKSGV---VDVALGGGRRNFIPSDVTDGEGKIGKRAPGDNLLPAFEEAGVAYAWDQATFDAL 266
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A369QYQ8_9RHOB (Alkaline phosphatase n=2 Tax=Rhodovulum sp. 12E13 TaxID=2203891 RepID=A0A369QYQ8_9RHOB)

HSP 1 Score: 185 bits (470), Expect = 3.940e-53
Identity = 101/180 (56.11%), Postives = 120/180 (66.67%), Query Frame = 1 
Query:    7 PWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMALDFE 546
            P   LVKTYN N+QTPDSAGT TAM  G KT  GV+GV+ +V+RGDCSTLPGN +  I++ A  + K VG +STARITHATPA +YA++VDRNFE  VPEGCTEQ DIA Q LL +M G    +D A GGGRR+F         G  G R DGRNLI EA +AG   A   + F A   +
Sbjct:   89 PNLALVKTYNVNSQTPDSAGTGTAMMAGVKTNIGVVGVNSNVVRGDCSTLPGNTVTAISEIADGMGKSVGAISTARITHATPASMYAKTVDRNFEDSVPEGCTEQTDIASQ-LLEAMTG--GLIDIAMGGGRRHFVPEGVEVEEGTGGRRADGRNLIEEAQEAGAYYAWNMETFAAAPLD 265
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A7S9QEU7_9RHOB (Alkaline phosphatase n=1 Tax=Pontivivens ytuae TaxID=2789856 RepID=A0A7S9QEU7_9RHOB)

HSP 1 Score: 184 bits (468), Expect = 8.750e-53
Identity = 104/183 (56.83%), Postives = 116/183 (63.39%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMALDFEDG 552
            MP  GLVKTYN NAQTPDSAGT TAM+ G KT AGVIGV EDV+RGDCST+PGNE+  IA     V + VGVVSTARITHATPA  YA S DRNFE  VPEGC    DIA Q +     G    +D A GGGRR+F      DA G  G R DG NL+  A+  G      ++ F ALD   G
Sbjct:   93 MPNLGLVKTYNVNAQTPDSAGTGTAMHAGVKTDAGVIGVDEDVVRGDCSTVPGNEVTSIAAMMTDVGRSVGVVSTARITHATPASSYAVSADRNFEDSVPEGCAH-TDIATQLIDAMEAGT---IDLAMGGGRRHFLPEDVTDAEGSNGRRADGTNLVERAESIGATVVFDQEGFDALDLTAG 271
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A6N6JIC3_9RHOB (Alkaline phosphatase n=1 Tax=Litoreibacter roseus TaxID=2601869 RepID=A0A6N6JIC3_9RHOB)

HSP 1 Score: 183 bits (465), Expect = 2.330e-52
Identity = 100/181 (55.25%), Postives = 119/181 (65.75%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMALDFE 546
             P   LVKTYN NAQTPDSAGT TAM +G KTKAGV+GV+E VIRGDC+T+ GN +  + +    + K  G+VSTARITHATPA  YA+SVDRNFE  VPE CT+Q DIA+Q L     G    +D A GGGRRNF  +   D   + G R DGRNLI EA  AGV  A   + F A+  +
Sbjct:   92 FPNLALVKTYNVNAQTPDSAGTGTAMMSGIKTKAGVVGVNEKVIRGDCTTIEGNTVASLNEIMSEMGKATGIVSTARITHATPASAYAKSVDRNFEEAVPEDCTQQADIARQLLSAMAAGT---IDVAMGGGRRNFLPTDTPDDEQDMGRREDGRNLITEAQHAGVSYAWNDETFAAMPLD 269
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A557RJE9_9GAMM (Alkaline phosphatase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A557RJE9_9GAMM)

HSP 1 Score: 179 bits (455), Expect = 7.020e-51
Identity = 100/173 (57.80%), Postives = 118/173 (68.21%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRD 522
             P  GLVKTYN N+QTPDSAGT TAM +G KT  GV+GV+ +V RGDCSTLPGNE+   ++    + K+VG+VSTARITHATP   YA SVDRNF A +PEGC  Q  IA+Q LL +M   +  VD A GGGRRNF      D  G+ G+R DGRNLIAEA + GV  A   D
Sbjct:   91 FPSLGLVKTYNVNSQTPDSAGTGTAMMSGVKTDIGVLGVNANVDRGDCSTLPGNEVANASEVFTEMGKEVGIVSTARITHATPGAAYAHSVDRNFAATLPEGCDTQKTIAEQ-LLEAMY--EGRVDVAMGGGRRNFITGDMTDNEGDSGNREDGRNLIAEAQENGVAYAWNTD 260
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A3D9BZ34_9RHOB (Alkaline phosphatase n=1 Tax=Rhodosalinus sediminis TaxID=1940533 RepID=A0A3D9BZ34_9RHOB)

HSP 1 Score: 179 bits (454), Expect = 9.850e-51
Identity = 99/178 (55.62%), Postives = 119/178 (66.85%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEAD-DAGVMTAQTRDEFMA 534
             P+  LVKTYN NAQTPDSAGT TAM  G KT  G+IGV  DV+RGDCSTLPGN +  + + A  + K  G+VSTARITHATPA  YA++VDRNFEA VPEGC  Q DIA Q L+ +M  +   +D A GGGRRNF +++     G  G R DGRNLI EA  + G   A  ++ F A
Sbjct:   91 FPYLALVKTYNVNAQTPDSAGTGTAMMAGVKTNIGIIGVDSDVVRGDCSTLPGNTVASMNEIAHEMGKATGIVSTARITHATPASAYAKTVDRNFEATVPEGCDTQTDIANQ-LIEAM--ESGLIDVAMGGGRRNFVDASMEIEEGTTGRREDGRNLIEEAQAELGAHYAWNQESFEA 265
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A7W6H240_9RHOB (Alkaline phosphatase n=1 Tax=Sulfitobacter undariae TaxID=1563671 RepID=A0A7W6H240_9RHOB)

HSP 1 Score: 179 bits (454), Expect = 1.000e-50
Identity = 101/181 (55.80%), Postives = 119/181 (65.75%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMALDFE 546
             P   LVKTYN+N QTPDSAGT TA+ +G KTKAGVIGV+E+V RGDC+T+PGNE+  + +   A+ K  GVVSTARITHATPA  YA S DRN+E  VPEGCT QVDIAQQ +     G    VD A GGGRRNF  +   D  G+ G R DG NLI      GV  A   + F AL+ +
Sbjct:   92 FPNLALVKTYNTNGQTPDSAGTGTAIMSGVKTKAGVIGVNENVNRGDCATVPGNEVATMNEIMAAMGKATGVVSTARITHATPATSYASSADRNWEESVPEGCTTQVDIAQQLVEAIKNGT---VDVAMGGGRRNFIGTDVTDEEGKTGRRADGVNLIEALKAEGVQYAWGDESFGALNLD 269
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A3S2URL5_9RHOB (Alkaline phosphatase n=1 Tax=Rhodobacteraceae bacterium CCMM004 TaxID=2499834 RepID=A0A3S2URL5_9RHOB)

HSP 1 Score: 175 bits (443), Expect = 5.700e-49
Identity = 102/184 (55.43%), Postives = 122/184 (66.30%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEA-DDAGVMTAQTRDEFMALDFEDG 552
             P   LVKTYN NAQTPDSAGT TAM  G KTKAG+IGV+E+V+RGDC+TL GN +  I++ A  + K  G+VSTARITHATPA  YA++VDRNFEA VPEGC  Q DIAQQ L+ +M  +   +  A GGG RNF+        GE G R DGR+LIA A D+ G   A     F A+D   G
Sbjct:   94 FPHLALVKTYNVNAQTPDSAGTGTAMMAGVKTKAGIIGVNENVVRGDCATLDGNTVTPISRIAVDMGKASGIVSTARITHATPASAYAQTVDRNFEAHVPEGCESQTDIAQQ-LIEAM--ESGLIHVAMGGGMRNFH-------AGEGGRREDGRDLIAYAQDELGAQFASDMASFKAVDPASG 267
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BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Match: A0A1N7KCJ0_9RHOB (Alkaline phosphatase n=1 Tax=Roseivivax lentus TaxID=633194 RepID=A0A1N7KCJ0_9RHOB)

HSP 1 Score: 171 bits (432), Expect = 7.590e-49
Identity = 96/177 (54.24%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:    4 MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCSTLPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVPEGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGDRIDGRNLIAEADDAGVMTAQTRDEFMA 534
             P   LVKTYN NAQTPDSAGT TAM  G KTKAG+IGV+E+V+RGDC+TLPGN +  I +    + K+ G+VSTAR+THATPA  YA++VDRNFEA VPEGCTEQ +IA Q +     G    +D A GGG RNF+         E G R DG NLI  A+  G   A  +  F A
Sbjct:   92 FPNLALVKTYNVNAQTPDSAGTGTAMMAGIKTKAGIIGVNENVVRGDCATLPGNTVASINEIMTEMGKETGIVSTARLTHATPASAYAKTVDRNFEAAVPEGCTEQKNIATQLIDAMEAGI---IDVAMGGGMRNFHAD-------EGGSREDGVNLIERAEGLGAHFAMDQASFDA 258
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig925.18262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ12_ECTSI1.070e-10788.04Alkaline phosphatase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A2G6CFR4_9RHOB9.780e-5559.55Alkaline phosphatase n=2 Tax=Rhodobacterales bacte... [more]
A0A369QYQ8_9RHOB3.940e-5356.11Alkaline phosphatase n=2 Tax=Rhodovulum sp. 12E13 ... [more]
A0A7S9QEU7_9RHOB8.750e-5356.83Alkaline phosphatase n=1 Tax=Pontivivens ytuae Tax... [more]
A0A6N6JIC3_9RHOB2.330e-5255.25Alkaline phosphatase n=1 Tax=Litoreibacter roseus ... [more]
A0A557RJE9_9GAMM7.020e-5157.80Alkaline phosphatase n=5 Tax=Proteobacteria TaxID=... [more]
A0A3D9BZ34_9RHOB9.850e-5155.62Alkaline phosphatase n=1 Tax=Rhodosalinus sedimini... [more]
A0A7W6H240_9RHOB1.000e-5055.80Alkaline phosphatase n=1 Tax=Sulfitobacter undaria... [more]
A0A3S2URL5_9RHOB5.700e-4955.43Alkaline phosphatase n=1 Tax=Rhodobacteraceae bact... [more]
A0A1N7KCJ0_9RHOB7.590e-4954.24Alkaline phosphatase n=1 Tax=Roseivivax lentus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig925contigL-elsbetiae_contig925:65..1746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue2.8e-86
Seed eggNOG ortholog2880.D7FQ12
Preferred nameALPL
KEGG rclassRC00017
KEGG koko:K01077,ko:K21411
KEGG ReactionR02135,R04620
KEGG Pathwayko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020
KEGG ModuleM00126
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000287,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001501,GO:0001503,GO:0001666,GO:0001958,GO:0002020,GO:0002237,GO:0003006,GO:0003674,GO:0003824,GO:0004035,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0005903,GO:0006139,GO:0006464,GO:0006470,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007584,GO:0007586,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009897,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019362,GO:0019538,GO:0019637,GO:0019899,GO:0021915,GO:0022008,GO:0022414,GO:0030016,GO:0030154,GO:0031012,GO:0031090,GO:0031214,GO:0031224,GO:0031225,GO:0031226,GO:0031667,GO:0031960,GO:0032496,GO:0032501,GO:0032502,GO:0033273,GO:0033280,GO:0033993,GO:0034505,GO:0034641,GO:0035094,GO:0035264,GO:0035295,GO:0036075,GO:0036211,GO:0036293,GO:0036342,GO:0040007,GO:0042221,GO:0042476,GO:0042493,GO:0042578,GO:0042802,GO:0042803,GO:0043009,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043292,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046483,GO:0046486,GO:0046496,GO:0046658,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048513,GO:0048545,GO:0048589,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051384,GO:0051704,GO:0051707,GO:0051716,GO:0055086,GO:0060348,GO:0060349,GO:0060350,GO:0060429,GO:0065010,GO:0070482,GO:0070887,GO:0071310,GO:0071407,GO:0071529,GO:0071704,GO:0071944,GO:0072524,GO:0090407,GO:0098552,GO:0098588,GO:0098805,GO:0098852,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901564,GO:1901576,GO:1901700
EggNOG free text desc.alkaline phosphatase activity
EggNOG OGsCOG1785@1,KOG4126@2759
EC3.1.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00537,ko01000,ko03400,ko04147
Exons3
Model size555
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig925.18262.1prot_L-elsbetiae_contig925.18262.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig925 65..1743 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816996.7325594-CDS-L-elsbetiae_contig925:64..2801622816996.7325594-CDS-L-elsbetiae_contig925:64..280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 65..280 -
1691683970.385956-CDS-L-elsbetiae_contig925:64..2801691683970.385956-CDS-L-elsbetiae_contig925:64..280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 65..280 -
1622816996.744308-CDS-L-elsbetiae_contig925:1031..12651622816996.744308-CDS-L-elsbetiae_contig925:1031..1265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 1032..1265 -
1691683970.4032218-CDS-L-elsbetiae_contig925:1031..12651691683970.4032218-CDS-L-elsbetiae_contig925:1031..1265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 1032..1265 -
1622816996.755021-CDS-L-elsbetiae_contig925:1641..17431622816996.755021-CDS-L-elsbetiae_contig925:1641..1743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 1642..1743 -
1691683970.4207504-CDS-L-elsbetiae_contig925:1641..17431691683970.4207504-CDS-L-elsbetiae_contig925:1641..1743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig925 1642..1743 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816996.7652197-UTR-L-elsbetiae_contig925:1743..17461622816996.7652197-UTR-L-elsbetiae_contig925:1743..1746Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig925 1744..1746 -
1691683970.4344084-UTR-L-elsbetiae_contig925:1743..17461691683970.4344084-UTR-L-elsbetiae_contig925:1743..1746Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig925 1744..1746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig925.18262.1

>prot_L-elsbetiae_contig925.18262.1 ID=prot_L-elsbetiae_contig925.18262.1|Name=mRNA_L-elsbetiae_contig925.18262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp
MPWAGLVKTYNSNAQTPDSAGTATAMNTGHKTKAGVIGVSEDVIRGDCST
LPGNELELIAQQAKAVNKKVGVVSTARITHATPAGVYARSVDRNFEADVP
EGCTEQVDIAQQQLLMSMVGDDAWVDFAAGGGRRNFYNSTEVDATGEPGD
RIDGRNLIAEADDAGVMTAQTRDEFMALDFEDG*
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mRNA from alignment at L-elsbetiae_contig925:65..1746-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig925.18262.1 ID=mRNA_L-elsbetiae_contig925.18262.1|Name=mRNA_L-elsbetiae_contig925.18262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1682bp|location=Sequence derived from alignment at L-elsbetiae_contig925:65..1746- (Laminarionema elsbetiae ELsaHSoW15)
AGGATGCCCTGGGCTGGCCTGGTGAAAACATACAACAGCAACGCGCAGAC
GCCCGACTCGGCCGGCACCGCAACTGCTATGAACACCGGGCACAAGACCA
AGGCGGTAAGATGTTATTTTACACCTCAAAAGCATATGGTCGTTTCCTAG
AGTCAAAAAGGGTTTCCGTGGAGGGAGAAACGAACCAGAATAGGTAGACG
CTACATGTGGGAGTGTGCTACTACTGTTGTTGCTATGTACTGGCACACTG
GTTATTTTGGGGCATTTCCCTTGGAAGTATTCAGTAACTAGAGATACCCC
GTTGAATATTCCGGTACTATCCTATCAACCCAACATGTGGCTACGATAAG
GCCCTCTGGTTGATGTTTGGACAGAAAACAACAGCGTCATCTTGCGTTTG
ATTTCGTACGCCTGTTCAGTTATTTTCCCGGCTTTGTCTCCTGCTCGTAT
TCTGGTGCACCCTACCCAACGTCCACCACAGGGCGTGATCGGTGTTTCCG
AAGATGTCATCCGCGGGGATTGCTCGACCCTCCCCGGCAATGAGCTCGAG
CTGATTGCTCAGCAGGCCAAGGCGGTGAACAAGAAAGTTGGTGTCGTTTC
TACCGCCCGTATCACCCATGCCACCCCTGCTGGCGTGTACGCGCGCAGCG
TCGACCGCAACTTTGAGGCCGACGTACCCGAGGGATGCACGGAGCAGGTC
GATATCGCACAGCAGGTGTGTGACCCTTATCTACACACAGACAATACTAT
GTACCGTGCAATACAAGCTAGGTTGAGCAAGCAGCTCGCTTTTTGTTCGC
TCGGGTCTAGCTCTGCCATTTTTACGAGTTTAGGCTTGGAACTTCGTCGC
TGCTCCTACAAGGTGATAGGGGAGGCGTCGGTGCCGGAATATTTTTAGCC
CGAGCTGATTACGTAAAAAATAGTGGAATAGTCAATAGGCGGCGTAGTTG
TGAGTTGTCCTACGCTATAATCGATACGAAACAAAGTGTCGCCGATCGAG
ACGAAAAAAACAATTGGTGCAATTGTGAATCTCTTGGCAGGGCGATCCGA
ATAACATGCCAAAAAATCAGACTCTAATTCGTAAAAATCGCGTGGGAAAT
CGCGTCCAGCCATATTGTCAGTGTCTCGATCAACCCAGCTTGTAGCAGCA
GCATAATCGTGCAGCAGTACTAGCAGCACCATCGCGCCGTAGGTGTACTA
GTCAGTCTAGGTATACGGTGTGAGGTCGTACGTCCCAAGCTCTGAGCACC
GAGGGCAAAATAACTCCTATTAGTCTAGTACACTGCAGACGGCCGCTTGT
TCGGTGTGGGATATTCACACAGAACAGTCGTGAATAGGCTGGAGTCCTAA
ACAAAATACGCCAAATAAACTCGTGAGAGAAGAGCAGATCAATAGGTACA
AGAAGAACGTACTCTGCAAGAGTCCAATATTTTCCTCTTTCCACTGCTTA
TTCAACCTAACTTGAGCAGCTTCTCATGTCCATGGTGGGCGACGACGCCT
GGGTCGACTTCGCCGCGGGCGGGGGTAGGCGTAACTTCTACAACTCCACC
GAAGTCGACGCCACGGGAGAGCCCGGTGACCGCATAGACGGTCGCAACCT
GATCGCCGAGGCCGATGACGCAGGCGTTATGACCGCGCAGACTAGGGATG
AATTCATGGCCCTCGACTTTGAAGATGGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig925:65..1746-

>mRNA_L-elsbetiae_contig925.18262.1 ID=mRNA_L-elsbetiae_contig925.18262.1|Name=mRNA_L-elsbetiae_contig925.18262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig925:65..1746- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCCTGGGCTGGCCTGGTGAAAACATACAACAGCAACGCGCAGACGCC
CGACTCGGCCGGCACCGCAACTGCTATGAACACCGGGCACAAGACCAAGG
CGATGCCCTGGGCTGGCCTGGTGAAAACATACAACAGCAACGCGCAGACG
CCCGACTCGGCCGGCACCGCAACTGCTATGAACACCGGGCACAAGACCAA
GGCGGGCGTGATCGGTGTTTCCGAAGATGTCATCCGCGGGGATTGCTCGA
CCCTCCCCGGCAATGAGCTCGAGCTGATTGCTCAGCAGGCCAAGGCGGTG
AACAAGAAAGTTGGTGTCGTTTCTACCGCCCGTATCACCCATGCCACCCC
TGCTGGCGTGTACGCGCGCAGCGTCGACCGCAACTTTGAGGCCGACGTAC
CCGAGGGATGCACGGAGCAGGTCGATATCGCACAGCAGGGCGTGATCGGT
GTTTCCGAAGATGTCATCCGCGGGGATTGCTCGACCCTCCCCGGCAATGA
GCTCGAGCTGATTGCTCAGCAGGCCAAGGCGGTGAACAAGAAAGTTGGTG
TCGTTTCTACCGCCCGTATCACCCATGCCACCCCTGCTGGCGTGTACGCG
CGCAGCGTCGACCGCAACTTTGAGGCCGACGTACCCGAGGGATGCACGGA
GCAGGTCGATATCGCACAGCAGCAGCTTCTCATGTCCATGGTGGGCGACG
ACGCCTGGGTCGACTTCGCCGCGGGCGGGGGTAGGCGTAACTTCTACAAC
TCCACCGAAGTCGACGCCACGGGAGAGCCCGGTGACCGCATAGACGGTCG
CAACCTGATCGCCGAGGCCGATGACGCAGGCGTTATGACCGCGCAGACTA
GGGATGAATTCATGGCCCTCGACTTTGAAGATGGGTGACAGCTTCTCATG
TCCATGGTGGGCGACGACGCCTGGGTCGACTTCGCCGCGGGCGGGGGTAG
GCGTAACTTCTACAACTCCACCGAAGTCGACGCCACGGGAGAGCCCGGTG
ACCGCATAGACGGTCGCAACCTGATCGCCGAGGCCGATGACGCAGGCGTT
ATGACCGCGCAGACTAGGGATGAATTCATGGCCCTCGACTTTGAAGATGG
GTGA
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