mRNA_L-elsbetiae_contig9237.18256.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9237.18256.1
Unique NamemRNA_L-elsbetiae_contig9237.18256.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A0A6H5JQJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQJ6_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 1.220e-121
Identity = 169/184 (91.85%), Postives = 178/184 (96.74%), Query Frame = 1 
Query:    1 QGMKKLMDAPEDGVKLKLFRGLAADLYNPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAVR 552
            +GMKKLMDAPEDGVKLKLFRGLA+DLYNP+VYFD+EI GE KGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDF+NADGTGGSSIYGAKFEDENF LKHTGPG+LSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGS+ GK SK ++
Sbjct:  146 EGMKKLMDAPEDGVKLKLFRGLASDLYNPKVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKQIK 329
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A7SXN2_NEMVE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SXN2_NEMVE)

HSP 1 Score: 239 bits (611), Expect = 2.180e-78
Identity = 116/152 (76.32%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   94 YFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            YFD+EIGG P GRI+M+LR DVVPKTAENFR LCTGE   G  YKG+ FHRVIPGFM QGGDF   DGTGG SIYGAKF DENF LKHTGPG+LSMANAGPGTNGSQFF+C AKT WLD KHVVFG V DG   VK IE +GS+SGKTSK V
Sbjct:    6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEK--GFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIEKVGSDSGKTSKKV 155
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: D3WFS1_CONAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Conus anemone novaehollandiae TaxID=718021 RepID=D3WFS1_CONAN)

HSP 1 Score: 239 bits (610), Expect = 3.210e-78
Identity = 115/156 (73.72%), Postives = 129/156 (82.69%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NPQV+FD+EIGG+P GRI+M+LR+DVVPKTAENFR LCTGE   G  +KG+ FHRVIPGFM QGGDF   +GTGG SIYG KFEDENF LKHTG G+LSMANAGP TNGSQFF+C AKT WLD KHVVFG V+DG   VK IEL+GS+SG TSK V
Sbjct:    3 NPQVFFDIEIGGKPVGRIVMELRADVVPKTAENFRALCTGEK--GFGFKGSSFHRVIPGFMCQGGDFTRHNGTGGKSIYGNKFEDENFKLKHTGAGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGNVVDGMDVVKAIELVGSDSGTTSKKV 156
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A0A7S3SCM7_9SPIT (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SCM7_9SPIT)

HSP 1 Score: 242 bits (617), Expect = 5.960e-78
Identity = 113/156 (72.44%), Postives = 130/156 (83.33%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+F++E+GGEP GRI+MQLR+DVVPKTAENFRQLC  +  +G+ YKG+ FHRVIPGFM QGGDF N DGTGG SIYG KF DENF L HTGPG+LSMANAGPGTNGSQFF+C AKTPWLD KHVVFG+V+ G   VK +E +GS SG TSK V
Sbjct:   84 NPRVFFEIEVGGEPAGRIVMQLRADVVPKTAENFRQLCLKD--EGEGYKGSSFHRVIPGFMCQGGDFTNHDGTGGRSIYGEKFADENFKLTHTGPGVLSMANAGPGTNGSQFFLCTAKTPWLDGKHVVFGKVVKGMDVVKAVEAVGSQSGTTSKKV 237
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A0A2C9V0Y6_MANES (Peptidyl-prolyl cis-trans isomerase n=4 Tax=rosids TaxID=71275 RepID=A0A2C9V0Y6_MANES)

HSP 1 Score: 237 bits (605), Expect = 2.340e-77
Identity = 113/161 (70.19%), Postives = 131/161 (81.37%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKS-----YKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+FD+ IGG+P GRI+M+L +DVVP+TAENFR LCTGE   GKS     YKG+ FHRVIPGFM QGGDF   +GTGG SIYG+KF DENF  KHTGPG+LSMANAGPGTNGSQFFIC AKT WLD KHVVFG+V++G   VK +E +GS+SGKTSK V
Sbjct:    3 NPKVFFDMAIGGQPAGRIVMELYADVVPRTAENFRALCTGEKGAGKSGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVVEGLDVVKAVEKVGSSSGKTSKPV 163
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A0A067K5P6_JATCU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A067K5P6_JATCU)

HSP 1 Score: 237 bits (605), Expect = 2.420e-77
Identity = 114/161 (70.81%), Postives = 131/161 (81.37%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKS-----YKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+FD+ +GG+P GRI+M+L  DVVP+TAENFR LCTGE   GKS     YKG+ FHRVIPGFM QGGDF   +GTGG SIYGAKF DENF  KHTGPG+LSMANAGPGTNGSQFFICVAKT WLD KHVVFG+V++G   VK IE +GS+SG+TSK V
Sbjct:    3 NPKVFFDMAVGGQPVGRIVMELYQDVVPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICVAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPV 163
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: R1E2V0_EMIHU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E2V0_EMIHU)

HSP 1 Score: 237 bits (605), Expect = 3.380e-77
Identity = 112/156 (71.79%), Postives = 129/156 (82.69%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+FD+EIGGEP GR++MQLR+DVVPKTAENFRQLC  E  +G+ YKG+ FHRVIPGFM QGGDF N +GTGG SIYG KFEDENF LKHTG G+LSMANAGPGTNGSQFF+C AKT WLD KHVVFG+V+ G   V  +E +GS  G+TSK V
Sbjct:   10 NPKVFFDMEIGGEPAGRVVMQLRADVVPKTAENFRQLCLKE--EGEGYKGSSFHRVIPGFMCQGGDFTNHNGTGGKSIYGEKFEDENFQLKHTGKGVLSMANAGPGTNGSQFFLCTAKTAWLDGKHVVFGKVVKGMDVVVAVEAVGSQGGETSKKV 163
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: A0A8B8NCF8_9MYRT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8NCF8_9MYRT)

HSP 1 Score: 236 bits (603), Expect = 4.870e-77
Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKS-----YKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+FDV IGGEP GRI+M+L +D  P+TAENFR LCTGE   G+S     YKG+ FHRVIPGFM QGGDF   +GTGG SIYG+KFEDENF  KHTGPG+LSMANAGPGTNGSQFFIC  KTPWLD KHVVFG+V++G   VK IE +GS+SG+TSK V
Sbjct:    3 NPRVFFDVTIGGEPAGRIVMELFADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSPFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFEDENFVRKHTGPGVLSMANAGPGTNGSQFFICTEKTPWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPV 163
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BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: W7TD66_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD66_9STRA)

HSP 1 Score: 241 bits (614), Expect = 5.680e-77
Identity = 114/176 (64.77%), Postives = 134/176 (76.14%), Query Frame = 1 
Query:   22 DAPEDGVKLKLFRGLAADLYNPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            +AP + V+++ +RG   DL NPQV+FD++IGGE  GRI  +LR DVVPKTAENFR LCTGE   G  YK + FHRVIPGFM QGGDF + DG GG SIYGAKF+DENF L H GPG+LSMANAGP TNGSQFF+C  +TPWLD KHVVFG+V +G   +K IE +GS  GKTS  V
Sbjct:  113 NAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEK--GFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPV 286
[Close]
BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Match: G3CU70_MOMCH (Peptidyl-prolyl cis-trans isomerase n=5 Tax=cellular organisms TaxID=131567 RepID=G3CU70_MOMCH)

HSP 1 Score: 236 bits (602), Expect = 6.920e-77
Identity = 111/161 (68.94%), Postives = 132/161 (81.99%), Query Frame = 1 
Query:   82 NPQVYFDVEIGGEPKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKS-----YKGTIFHRVIPGFMLQGGDFENADGTGGSSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSNSGKTSKAV 549
            NP+V+FD+ IGG+P GRI+M+L ++VVP+TAENFR LCTGE  +G+S     YKG+ FHRVIPGFM QGGDF   +GTGG SIYGAKF DENF  KHTGPG+LSMANAGPGTNGSQFFIC AKT WLD KHVVFG+++DG   VK +E +GS+SG+TSK V
Sbjct:    3 NPKVFFDMTIGGQPAGRIVMELYANVVPRTAENFRALCTGEKGNGRSGKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGVLSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQIVDGMDVVKAVEKVGSSSGRTSKPV 163
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9237.18256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQJ6_9PHAE1.220e-12191.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A7SXN2_NEMVE2.180e-7876.32Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nemato... [more]
D3WFS1_CONAN3.210e-7873.72Peptidyl-prolyl cis-trans isomerase n=1 Tax=Conus ... [more]
A0A7S3SCM7_9SPIT5.960e-7872.44Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A2C9V0Y6_MANES2.340e-7770.19Peptidyl-prolyl cis-trans isomerase n=4 Tax=rosids... [more]
A0A067K5P6_JATCU2.420e-7770.81Peptidyl-prolyl cis-trans isomerase n=2 Tax=Croton... [more]
R1E2V0_EMIHU3.380e-7771.79Peptidyl-prolyl cis-trans isomerase n=1 Tax=Emilia... [more]
A0A8B8NCF8_9MYRT4.870e-7770.19Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodam... [more]
W7TD66_9STRA5.680e-7764.77Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodo... [more]
G3CU70_MOMCH6.920e-7768.94Peptidyl-prolyl cis-trans isomerase n=5 Tax=cellul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9237contigL-elsbetiae_contig9237:2484..7664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.7
Seed ortholog evalue2.1e-94
Seed eggNOG ortholog2880.D8LHP1
Preferred namePPIE
KEGG koko:K01802,ko:K09564
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0000737,GO:0000974,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003755,GO:0003824,GO:0004518,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006308,GO:0006309,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006921,GO:0006950,GO:0006955,GO:0006974,GO:0008143,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0009056,GO:0009057,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0012501,GO:0012505,GO:0016018,GO:0016043,GO:0016070,GO:0016071,GO:0016192,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0030141,GO:0030262,GO:0031323,GO:0031326,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032940,GO:0032991,GO:0033218,GO:0033554,GO:0034641,GO:0034655,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045055,GO:0045069,GO:0045070,GO:0045321,GO:0046483,GO:0046700,GO:0046903,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051716,GO:0060205,GO:0060255,GO:0065007,GO:0070013,GO:0070717,GO:0071007,GO:0071013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0097159,GO:0097194,GO:0097708,GO:0099503,GO:0101002,GO:0140096,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1902494,GO:1903506,GO:1903900,GO:1903902,GO:1904813,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0111@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Ec32 ortholog descriptionPDZ domain
Ec32 orthologEc-26_003850.1
Exons5
Model size552
Cds size546
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9237.18256.1prot_L-elsbetiae_contig9237.18256.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9237 2484..7658 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816996.0662556-CDS-L-elsbetiae_contig9237:2483..26001622816996.0662556-CDS-L-elsbetiae_contig9237:2483..2600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 2484..2600 -
1691683969.830889-CDS-L-elsbetiae_contig9237:2483..26001691683969.830889-CDS-L-elsbetiae_contig9237:2483..2600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 2484..2600 -
1622816996.0775228-CDS-L-elsbetiae_contig9237:3359..35241622816996.0775228-CDS-L-elsbetiae_contig9237:3359..3524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 3360..3524 -
1691683969.8530114-CDS-L-elsbetiae_contig9237:3359..35241691683969.8530114-CDS-L-elsbetiae_contig9237:3359..3524Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 3360..3524 -
1622816996.0916097-CDS-L-elsbetiae_contig9237:4414..44951622816996.0916097-CDS-L-elsbetiae_contig9237:4414..4495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 4415..4495 -
1691683969.8861787-CDS-L-elsbetiae_contig9237:4414..44951691683969.8861787-CDS-L-elsbetiae_contig9237:4414..4495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 4415..4495 -
1622816996.1034713-CDS-L-elsbetiae_contig9237:6033..61321622816996.1034713-CDS-L-elsbetiae_contig9237:6033..6132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 6034..6132 -
1691683969.8979194-CDS-L-elsbetiae_contig9237:6033..61321691683969.8979194-CDS-L-elsbetiae_contig9237:6033..6132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 6034..6132 -
1622816996.1169224-CDS-L-elsbetiae_contig9237:7574..76581622816996.1169224-CDS-L-elsbetiae_contig9237:7574..7658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 7575..7658 -
1691683969.9090242-CDS-L-elsbetiae_contig9237:7574..76581691683969.9090242-CDS-L-elsbetiae_contig9237:7574..7658Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9237 7575..7658 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816996.1295745-UTR-L-elsbetiae_contig9237:7658..76641622816996.1295745-UTR-L-elsbetiae_contig9237:7658..7664Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9237 7659..7664 -
1691683969.9224129-UTR-L-elsbetiae_contig9237:7658..76641691683969.9224129-UTR-L-elsbetiae_contig9237:7658..7664Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9237 7659..7664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9237.18256.1

>prot_L-elsbetiae_contig9237.18256.1 ID=prot_L-elsbetiae_contig9237.18256.1|Name=mRNA_L-elsbetiae_contig9237.18256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MKKLMDAPEDGVKLKLFRGLAADLYNPQVYFDVEIGGEPKGRILMQLRSD
VVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFENADGTGG
SSIYGAKFEDENFTLKHTGPGMLSMANAGPGTNGSQFFICVAKTPWLDDK
HVVFGEVIDGARTVKDIELLGSNSGKTSKAVR
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mRNA from alignment at L-elsbetiae_contig9237:2484..7664-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9237.18256.1 ID=mRNA_L-elsbetiae_contig9237.18256.1|Name=mRNA_L-elsbetiae_contig9237.18256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5181bp|location=Sequence derived from alignment at L-elsbetiae_contig9237:2484..7664- (Laminarionema elsbetiae ELsaHSoW15)
CAGGGGATGAAGAAGCTCATGGACGCTCCAGAGGACGGGGTGAAGCTGAA
GCTCTTCCGGGGGCTTGCCGCTGACCTCTACAACCCCCAGGTAATACTGC
TCGTTGTTGACGAGGGTGGGGAGTGCTGAGCCCTGCTCGCGATAAAAACA
TCCAAGGCGGGCACCGCAGGAGGGGGTCGTCCCCACCTCCTGTGTGACCC
CGGTCGAGTCGTCTAGCTAGTCGTAGTGGAGGAAGGGGGCCAGTTGGGCA
AACGACAAATATGCCAATAATTGGAGGGAACAAAAAACTGCTTCTATTTT
CATGCCGGGGCGGCAACCGTACGCTATTTAGTTTTCTTTGTGTATGTGGC
CGACTTCTTTGATTAGGGTGGACAGGTGGGTACCGTAGGTGACACAAGAT
ACCACACCCCCTGGACCGAACTTTAGAGCTCCATTACTCTGTAACGAAGA
AGTTGCCAGCACCAAGCAACACATGTTCGGACAGCCCTCGACTAGATCTT
TCCAGTGCCACCTCTTTCGGCACTGGCTCTCTTCTTGCTGAAGAGGAATC
GAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGT
AGTAGAGGGGGAGTAGAGGAGGGTGGCCGGCCGGCGAGGACATATGTATA
TATAGTTTGCACAGAGGCGTCGGAACCCCCCCCCCGTCGGACTGCTGCAC
GCCTGCCTGTCTGTGTGGTGGCGCGTGGGCTGCGTAGAGCCATTTTGATA
AGAAAAACAGACAGTTACGGTGGTCGAAAATGGAACCTAAGGCCGTTTCT
TATGTACGAACGAAAAAGCTAACCGAAAAGTGTGCATTCGCCCGAGAATG
CCACTGGGCGCGAGATATGTACGAGATTGCTCAGCAGCCAGCAGAAAATA
TCTGAGCAGCCCCCAGTTCTCGGCCCCAAGGGCACCGGTTGCAATCGCAG
CACTTCAGGCGTGTGCTCCATGGTGATATCTATGGGTGTGCCAACTGTAT
GGGGCGTGGGCGTTGCGTGTGGCGAGAGTTTTGTGGAAGAGTAGAGAATC
TGGTCGAACTTTTCGACTGGGAATCAAATCGGATTTGTATGCTTTTTTCG
ATTCAAGTGAAACCAAAAAAGTTCGGATCAGATTCTACTCCGACACAAAG
CTCTCGCCACACGCAACGCCCATGCCCCACACGACTGGCACGCCCAGAGA
TATCACCATGGAGCACACGCGCCTGAAGTGCTCTGATTGCCATCGGTGCT
TTTTCGATGCAAGCGTTCGTTCTTGGGATACCTAAACACATGTAGACTAG
TCTACACAGCGAGTCGATCGGAGAGACGTACCGGAAGCCGGCAGCTTTCT
CATCGTGCAGCTGATTTGTCTTCTTTTGTACGACGGCGGTGGAAAGGGGA
AACCCCTGCGTGCTTGTTCGTTTTTTGCCACTGCTGCTGCTGCTGTGCAA
AATATGTACCTGCTCTCCTGCTGGGAAAAAAAAAAACATGTGTTTATGAT
TATATGTACTTTAATGTACAACGATAATACAGGTGTACTTCGACGTCGAG
ATTGGCGGCGAGCCGAAGGGGCGTATCTTGATGCAGCTGCGGTCAGACGT
GGTGCCGAAGACCGCCGAAAACTTCCGCCAGGTACGTAGAAGCATATTTC
ATGCTTTTTAGTATTTAGTATGTATACCACAAGATAACACACCTCCTGGA
TCGATTTTCAAAGCTCCGTTACTCCGCAACAAGTAGGAGCATGACTCTTG
GTAGGTACTAAACGGCATGTTTTCGGAGAGCTTTTGATGAGATATTTCCA
ACGCCGCCCTTTTCGGGACTGGAACTCTTGTCGTTGTGGAGTAGTACCTG
GAGCTTTGGAAATCGGTCCAGGGGGTGTGTTATATTTTCGTATACGGTAG
TTTTATGTACGAAGTAAGTACTTTATTTTAGTTGTATACAGTAATTTCCC
CTGCTCTCTGGTAAACCTCCGCAACGGAAGGTATGGGGGTTATGGAAGCC
AGGGACGCGCGAGAGGGGGCACGAGCGGGAACGCGCGAGGGTGGGAGGGG
CAGGGAAGAAGAGACACCCTTTCGCTCTCATGGTTTAGTTTGCTTGCCGG
GGGGTGTCTGTCCTGTGCGCTGGAACGAGCACCACTTGGGATAGCCGAGC
TTGTATTGCGCCGGAGGGGGGGGGGGGGGATACACACATAGGGCTGTCGG
TGCCTGCGGATATGTATGAAGTATGTATATAATTTAGCGACTCTTATCCC
TGTTTGCAAGTGGTGTATGCCGGCACCAACAGGTGTTCCGAGCCCTTCAA
GTATAAAGTGTTTTTTCTTATTTTATTGGCGTCGGGTTTCCCTCTTCGCC
TCCCCTGCTCCGCGACGCCCGCAGCGCGGCCCGGCCCGGCCCAGCCGTGC
TAACCTCGTGATGCCACTGCTGCTGCCACTGCTGCTGCCACTGCTGCTGC
CACTGCTGCTGCTGCTGCTGCTGCTGTAGTCTTGATTTGTTTTTTTAGTT
TTGAGCCTTTTTGCCTGGTCCGGCGGGAACAAGCAGTTCGATGCTCGGCA
GGCTCTCGATACACCAGAGGGCGCACCGCATCCGCGACAATAGTATGCAC
GCAGATGCCTCAGCGTCCCCTCCCGAGAGTTGATGCGCCCGCCCGCCGTC
CGGATGGTGCTGAGTGCCAAGTATGGCTTTGTGGAAACAAAACCGAATAC
ATTCCTCCATGACCCATGTATGGGTGTTATGTACCGCCAACGTCTGTTTG
GTCCCCGATTGATAGTCGACCGATCAATAAAAACCTACTTCATACTACGA
ACAGTTCTTTCTAGCGAGAGGCGCATCCTCCTTTCCAACCAGTGCCTTGA
TGTGTCGCCCCCCCCATTATCGTTGCCATCATCATAATCTGTCGGTCTGT
CTGTGCTGTGCTGTCTGTCTTGTCTGTCTCGTCTGTCTGTTCTGTCTGTC
TGTCTGTCTGCCTGTCTGTCTCTCTGTCTCTCGCCTGTCTGTCTCTCTGC
CTCTCTGTCTGTTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTTCTGT
CTGCCTGTCTGTTCTGTCTGCCTGTCTGTTCTGTCTGCCTGTCTGTTCTG
TCTGCCTGTCTGTTCTGCCTGTCTGTCTGTTGTGCCTGTCTGTCTGTCTG
TCTGCCTGCCTCTTTCCAGCTGTGCACCGGCGAGGCACCGGACGGAAAGT
CGTACAAGGGCACCATCTTCCACAGGGTCATCCCCGGGTTCATGCTCCAG
GTACATAAATACAGTAGTGGCTGGACCCCCTGCTCGCGATAAAACATAAC
AGGCAGGCACCGCAGGAGGGGGTCCACCCCCCTCCACCCCCCATCCTGTG
TGACCCCGGTTGGGTCGTCTAGCTAAATAGTCGCAGTGGAGGATGGGGGC
CAGTGGGGCAGACAACGAATAAATAAGCCAATCATGGGAGGGAAGAAAAA
AAAAAATATGCCCAAGACCACGCGTCCCGTGTGTTGCGGTGTTTCCGGTG
CCGTGTATGCAGCGCCACGGGCCTGTCTATTATTCTTTTGCTGCTCTCCT
CTGTGTTTTTGAGATGCGGCCGGTGGCCTGAAACCGGGATTTTTTCTATG
CGCGCATGCATGGCGGTCGGTGTGAGCAACTCACTGCTGCTGTGGACTAC
TACTGCTGTGTCCGGTGCGCGCGCGTGCGTTTTTTATGGTGCATTCGTAT
TTAGATTTGGTTTTGCTGTCGTGATGGGGTCTCTTCGCGTTGGACCAATC
CACCCGGCGCGGTAAGTGTCCAGGGACCGGACTACAGTTTCCAATGTTCA
TGCAACCAGGGAACGATTCCAGCTGTATACTAAAGCAGTTCAGCACCTAA
ATACGTACAAAAAGAGACTTTGAAACGCCTTCTCGGTGTCGCCCGCTGTC
CTCCCCGACCCCCCCCCCCCCCCCCTTTTCTTGCTTCGCGTTGCCAGGGG
GGGGCCTTTGAAAACGGGGGAGGCCCGGGGGGGGCTTCGGTTTAGGGGGN
NNNNNNNNNCACCTGTAAACCAAAGCAGGTCCCCCCCCAAACAACTACAA
AAAACAGCTTTCGAACCCCTTCTCGGGGGGCCCCCCGGCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCATTTTCGTGCTTCGCGTTGCCAGGGGGGAGACT
TTGAGAACGCGGACGGCACGGGGGGGTCTTCGATCTACGGGGCCAAGTTC
GAGGACGAGAACTTCACGCTCAAGCACACTGGCCCCGGGATGCTGAGCAT
GGCCAACGCTGGCCCCGGAACGAACGGGAGCCAGTTCTTCATCTGCGTCG
CCAAGGTATATTTGTGTATGTACGCGGTGGTGCCGCCGCGGGCGATGGAA
CGCTGAGCACAACGACCTTTAGAAGCCGCAATCAAACCATTACACCAGTC
AAGTCGGGTGTCAAGTCGGAGACCAGTCAAGTCGGAGACCAGTCAAGTCG
GGCCCCGACTTGACTGGTCTCCGACTTGACTGGTCTAATGGTTTGATTTC
GGCTTCTATTTGTAGACCGTAGTGATGGTATGTCCGTAGATACCTTTCAA
ATCGTCGTGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGTTGTGCCGTGTGTTGT
TGCAAAAATTGTTAGCTTTGTCCCAAGCTTTTAGGTACGCCTTCCACGCG
CGTTTCACCTCGTATGTATGTGTGTATGTATGGCAAGATCGGCCGTACTT
CGAAGTATTTAGGTATTAATCATGTTCGTATCATAGGGAGAGCAAAGAAG
AGTTGGAATGCTTTGCGAACTGGTCGGAATTTTTTTTTGTAGGGGTGTGG
TGGCGCTTCGCTTCATCTCGATTGACGACTTGTTGCACGTCATTGACGAC
TGACTGGTTACTACGGGTTGTGAAAAAACGGCTCGAACGCTCTCATCGCC
AACCGAACCTTCTCGAAACCCGTGCTTGCTTCCTTGCTCTCGTCTCTTGC
TGCTGTCTTGTCGTTCGTGTCCGTGGCGCTGTGTGTGCTACTCCTTCCCC
CCCCCCGTGTGCAGACCCCCTGGCTAGACGACAAGCACGTCGTGTTCGGC
GAGGTTATCGACGGCGCCAGGACTGTGAAGGACATCGAGCTACTCGGCAG
CAATAGCGGCAAGACCAGCAAGGCGGTGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9237:2484..7664-

>mRNA_L-elsbetiae_contig9237.18256.1 ID=mRNA_L-elsbetiae_contig9237.18256.1|Name=mRNA_L-elsbetiae_contig9237.18256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1092bp|location=Sequence derived from alignment at L-elsbetiae_contig9237:2484..7664- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAAGCTCATGGACGCTCCAGAGGACGGGGTGAAGCTGAAGCTCTT
CCGGGGGCTTGCCGCTGACCTCTACAACCCCCAGATGAAGAAGCTCATGG
ACGCTCCAGAGGACGGGGTGAAGCTGAAGCTCTTCCGGGGGCTTGCCGCT
GACCTCTACAACCCCCAGGTGTACTTCGACGTCGAGATTGGCGGCGAGCC
GAAGGGGCGTATCTTGATGCAGCTGCGGTCAGACGTGGTGCCGAAGACCG
CCGAAAACTTCCGCCAGGTGTACTTCGACGTCGAGATTGGCGGCGAGCCG
AAGGGGCGTATCTTGATGCAGCTGCGGTCAGACGTGGTGCCGAAGACCGC
CGAAAACTTCCGCCAGCTGTGCACCGGCGAGGCACCGGACGGAAAGTCGT
ACAAGGGCACCATCTTCCACAGGGTCATCCCCGGGTTCATGCTCCAGCTG
TGCACCGGCGAGGCACCGGACGGAAAGTCGTACAAGGGCACCATCTTCCA
CAGGGTCATCCCCGGGTTCATGCTCCAGGGGGGAGACTTTGAGAACGCGG
ACGGCACGGGGGGGTCTTCGATCTACGGGGCCAAGTTCGAGGACGAGAAC
TTCACGCTCAAGCACACTGGCCCCGGGATGCTGAGCATGGCCAACGCTGG
CCCCGGAACGAACGGGAGCCAGTTCTTCATCTGCGTCGCCAAGGGGGGAG
ACTTTGAGAACGCGGACGGCACGGGGGGGTCTTCGATCTACGGGGCCAAG
TTCGAGGACGAGAACTTCACGCTCAAGCACACTGGCCCCGGGATGCTGAG
CATGGCCAACGCTGGCCCCGGAACGAACGGGAGCCAGTTCTTCATCTGCG
TCGCCAAGACCCCCTGGCTAGACGACAAGCACGTCGTGTTCGGCGAGGTT
ATCGACGGCGCCAGGACTGTGAAGGACATCGAGCTACTCGGCAGCAATAG
CGGCAAGACCAGCAAGGCGGTGAGGACCCCCTGGCTAGACGACAAGCACG
TCGTGTTCGGCGAGGTTATCGACGGCGCCAGGACTGTGAAGGACATCGAG
CTACTCGGCAGCAATAGCGGCAAGACCAGCAAGGCGGTGAGG
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