mRNA_L-elsbetiae_contig923.18247.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig923.18247.1
Unique NamemRNA_L-elsbetiae_contig923.18247.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: D7FQB3_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB3_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 3.490e-111
Identity = 210/319 (65.83%), Postives = 222/319 (69.59%), Query Frame = 2 
Query:    5 PLRGLMAVCTFARDRAARIAAXXXXXXXXXXXXXXXXXXXSYWSW---MARAVVGALEGYHDRGLPGISPLLDYRRYPALRSVVLRWDEFLDGDGKFLLVMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSM--MMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAEGRLEAFG-----GRQGLRSEE 931
            PLRGL A   F RDRAAR AA                      SW    A  V  ALEGY DRGLPGISP LDYRRYP LRSVVL WDEFL G+GK LLVMWDAPVAL DF  P RDD HERPEAAMLREGIARA+AIL+E K D    TAGR   G  GKRRREE EAKRL GLDLG+ SRFAALAEKCL+L++ GYLYSLCPFKEAKQD+ SLGRW+GW    PGG   A      +MLFDGGSRCH  K+RSCEV V CG EDAL AAEE+EIG YRL LETPLACTEA L EAE  LEA G      R GLR EE
Sbjct:  458 PLRGLAAAFGFLRDRAARAAAGLAASE----------------SWGLAPASTVRVALEGYRDRGLPGISPHLDYRRYPTLRSVVLHWDEFLHGNGKSLLVMWDAPVALWDFCFPYRDDKHERPEAAMLREGIARARAILQEKKPD----TAGR---GGRGKRRREESEAKRLSGLDLGEGSRFAALAEKCLDLEEGGYLYSLCPFKEAKQDKHSLGRWRGWG---PGGRGRAGRGRDRVMLFDGGSRCHNNKQRSCEVSVQCGSEDALVAAEEIEIGTYRLRLETPLACTEAHLAEAERGLEALGLVRPSARGGLRPEE 750
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A6H5JF29_9PHAE (MRH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF29_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.060e-104
Identity = 195/314 (62.10%), Postives = 213/314 (67.83%), Query Frame = 2 
Query:    5 PLRGLMAVCTFARDRAARIAAXXXXXXXXXXXXXXXXXXXSYWSWMARAVVGALEGYHDRGLPGISPLLDYRRYPALRSVVLRWDEFLDGDGKFLLVMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAEGRLEAFG-----GRQGLRSEE 931
            PLRGL A   F RD AAR AA                   S+    A  V  ALE Y DRGLPGISP LDYRRYP LRSVVLRWDEFL G+GKFLLVMWDAPVAL DF  P RDD++ERPEAAMLREGIARA+AIL+E K D A       G         EE EAKRL GLDLG+ SRFAALA KCL+L++ GYLYSLCPFK+AKQD+ SLGRW+GW     G  P    + +MLFDGGSRCH  K+RSCEV V CGPEDAL AAEE+EIG Y L LETPLACTEA + EAE  LEA G      R GLR EE
Sbjct:  212 PLRGLAAAFGFLRDWAARAAAGLAASE-------------SWGLTPASTVRVALEDYRDRGLPGISPHLDYRRYPTLRSVVLRWDEFLHGNGKFLLVMWDAPVALWDFCFPYRDDEYERPEAAMLREGIARARAILQERKPDTA-------GGXXXXXXXXEESEAKRLSGLDLGEGSRFAALAGKCLDLEEGGYLYSLCPFKDAKQDKHSLGRWRGWGTGGRG-LPGRGRNRVMLFDGGSRCHN-KQRSCEVSVECGPEDALVAAEEIEIGTYHLRLETPLACTEAHVAEAELGLEALGLVRPSARAGLRPEE 503
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: K3X1Z1_GLOUD (Glucosidase 2 subunit beta n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1Z1_GLOUD)

HSP 1 Score: 99.4 bits (246), Expect = 3.350e-18
Identity = 73/240 (30.42%), Postives = 110/240 (45.83%), Query Frame = 2 
Query:  209 LDYRRYPALRSV---VLR--WDEFLDGDGKFLL----------VMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAE 883
            +D RR P+L S+   VL   W   L GDG+             V WDAP+   ++  P  +D     EA  LR+       +++E  AD             + K  R   E +     D G    F AL ++C+E +   Y Y LC F++ KQD + LG+W+ W   + G    A     M F  G +C  G  RS +V + CG E+ + + +E    +Y + L+TPLACT+  L +A+
Sbjct:  398 VDRRRLPSLASLQASVLHAPWFRRL-GDGQVYRAYRSVAWGAKVAWDAPIFAYNYLFPQLNDSVVSREAESLRK-------VMQEIDAD-------------IEKLTRARDEKREAAAKDYGPERAFFALNDQCIEKKIEKYTYKLCAFRDVKQDYTLLGKWEAWGSADNGDKDYAR----MQFIKGQKCWNGPERSVQVRLACGQENEIVSVDEPSTCVYEMLLQTPLACTQDVLAQAQ 612
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: G4YYQ9_PHYSP (Glucosidase 2 subunit beta n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YYQ9_PHYSP)

HSP 1 Score: 99.0 bits (245), Expect = 6.130e-18
Identity = 64/202 (31.68%), Postives = 97/202 (48.02%), Query Frame = 2 
Query:  293 VMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPG-----GAPAAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAE 883
            ++WDAP+    +  P  D+  + P A  LR+       +LRE ++D +           L K R E++E  ++   D G    + AL +KC+E +   Y Y  CPF E KQDR+ LG+W GW   E       G         M F  G RC  G  RS  V + CG ++ + + +E    +Y +++ TPLACT   L +A+
Sbjct:  627 IIWDAPIYAYQYLFPKLDEVVKLPVAESLRK-------VLREIESDIST----------LEKERNEKRETAKM---DYGPDRAYFALKDKCIEKRIEKYEYKFCPFDEVKQDRTKLGKWDGWAVDEANDSSSNGENGKAGYTKMRFAKGQRCWKGPERSVLVHLDCGEDNEILSLDEPSTCVYEMTVSTPLACTAQVLAKAQ 808
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A225UKC1_9STRA (Glucosidase 2 subunit beta n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UKC1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.270e-17
Identity = 58/186 (31.18%), Postives = 88/186 (47.31%), Query Frame = 2 
Query:  335 PPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSM---MMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAE 883
            P  DD+ + P A  LR+       +LRE  AD             + K  +E+ E +    +D G    + AL +KC++ +   Y Y  C F E KQDR+ LG+W GW   E   + A    +    M +  G RC+ G  RS  V + CG E+ +   +E    +Y +++ +PLACT   L +AE
Sbjct:    8 PTLDDEIKLPVADSLRK-------VLREINAD-------------IAKLEKEQNEKREAAKMDYGPDRAYFALKDKCIDKRIEKYEYKFCAFSEIKQDRTKLGKWDGWPVEEIKDSSATTTQVDHSKMRYSKGQRCYKGPERSVVVHLECGAENEILNVDEPSTCVYEMNVRSPLACTAQVLAKAE 173
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: H3HCW6_PHYRM (Glucosidase 2 subunit beta n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCW6_PHYRM)

HSP 1 Score: 97.1 bits (240), Expect = 2.950e-17
Identity = 61/203 (30.05%), Postives = 98/203 (48.28%), Query Frame = 2 
Query:  293 VMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAP--AAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAEGRLE 895
            V+WDAP+    +  P  D++ + P A  LR+       +L E   D             L K R E++EA ++   D G    + +L +KC+E +   Y Y  C F E KQDR+ LG+W GW   E   +     +    M +  G RC+ G  RS  V + CG ++ + + +E    +Y +++ +PLACT   L +A+  +E
Sbjct:  582 VVWDAPIYAYQYLFPKLDEEVKLPVAESLRK-------VLHEIDTDITK----------LEKERNEKREAAKM---DYGPDRAYFSLKDKCIEKRIEKYEYKFCAFGEVKQDRTKLGKWDGWAVDETNDSSNEGEIDHTKMRYSKGQRCYKGPERSVFVYLNCGEDNEILSVDEPSTCVYEMTVRSPLACTAQVLAKAQKDVE 764
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A7S2WK79_9STRA (Glucosidase 2 subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK79_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.960e-14
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 2 
Query:  509 LLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLAC 856
            L G D G    +  L  KC E   +G+ YS+CPF +AKQD +SLG++  W+              +MLFD G++C  G +RS +V   CG ED + + EE E  +Y  S  +P AC
Sbjct:  324 LEGTDFGLLKEYFVLNGKCFESHVSGFKYSICPFGDAKQDHTSLGKFTTWKDTN-----------VMLFDNGAKCWNGPKRSLQVTFTCGAEDKILSVEEPETCVYAASFLSPAAC 428
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A3R7JYM7_9STRA (Glucosidase 2 subunit beta n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JYM7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.120e-13
Identity = 67/231 (29.00%), Postives = 104/231 (45.02%), Query Frame = 2 
Query:  200 SPLLDYRRYPALRSVVLRWDEFLDGDGKFLLVMWDAPVALRDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGALGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAA---MLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAE 883
            S +LD R + +L+S +   D       ++L  M   P   + F  P  DD    P A  LRE +   +A + +                 L K R E+ EA +    D G    F +L +KC+E +   YLY  C F E KQD++ LG+W+GW   E   +      +    M +  G +C+ G  RS  V + CG ED + + +E    +Y + + +P ACT   L +A+
Sbjct:  284 SEVLDTRMH-SLKSFIELSDHTRVSLAEYLR-MDHRPPPTKKF--PKLDDQVTLPVAKSLREALREIEADINK-----------------LEKERGEKYEAAKA---DFGPDRAFFSLKDKCIEQRIEKYLYKFCAFGEVKQDKTKLGKWEGWVIDETSTSSTGEPYVGHTKMKYSRGQKCYKGPERSVIVHLECGIEDQIVSVDEPSTCIYSMVVRSPFACTAGMLAKAQ 490
[Close]
BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A225ULC5_9STRA (Glucosidase 2 subunit beta n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225ULC5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.280e-13
Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 2 
Query:  572 LQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSM---MMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAE 883
            L +  Y Y  C F E KQDR++LG+W GW   E   + A    +    M +  G RC+ G  RS  V + CG E+ +   +E    +Y +++ +PLACT   L +AE
Sbjct:    4 LNEQKYEYKFCAFSEIKQDRTNLGKWDGWSVEEMKDSSATTTQVDHSKMRYSKGQRCYKGPERSVVVHLECGAENEILNVDEPSTCVYEMNVRSPLACTAQVLAKAE 110
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BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Match: A0A7S4DKM3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKM3_HETAK)

HSP 1 Score: 78.2 bits (191), Expect = 5.140e-13
Identity = 44/119 (36.97%), Postives = 59/119 (49.58%), Query Frame = 2 
Query:  548 ALAEKCLELQQAGYLYSLCPFKEAKQDRSSLGRWQGWERREPGGAPAAMLSMMMLFDGGSRCHTGKRRSCEVLVGCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAEGRLEAFG 904
            AL  +C E     + Y +CPF +A Q R+ +G++  W   + G  P      M  +  G  CH G  R  EV++ C     L  AEE E+  Y L+L TPLAC+   L  AE RL A G
Sbjct:    2 ALDGECFEGNFGEFTYEVCPFGQANQGRTRIGKFDRWGEGQHG--PEGQTPTM-YYTKGQTCHGGLARKAEVVLRCAATSGLVEAEEPEVCSYALTLTTPLACSRQGLATAEARLVALG 117
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig923.18247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FQB3_ECTSI3.490e-11165.83Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A6H5JF29_9PHAE1.060e-10462.10MRH domain-containing protein n=1 Tax=Ectocarpus s... [more]
K3X1Z1_GLOUD3.350e-1830.42Glucosidase 2 subunit beta n=1 Tax=Globisporangium... [more]
G4YYQ9_PHYSP6.130e-1831.68Glucosidase 2 subunit beta n=1 Tax=Phytophthora so... [more]
A0A225UKC1_9STRA1.270e-1731.18Glucosidase 2 subunit beta n=1 Tax=Phytophthora me... [more]
H3HCW6_PHYRM2.950e-1730.05Glucosidase 2 subunit beta n=1 Tax=Phytophthora ra... [more]
A0A7S2WK79_9STRA4.960e-1437.93Glucosidase 2 subunit beta n=1 Tax=Rhizochromulina... [more]
A0A3R7JYM7_9STRA1.120e-1329.00Glucosidase 2 subunit beta n=2 Tax=Phytophthora ke... [more]
A0A225ULC5_9STRA3.280e-1335.51Glucosidase 2 subunit beta n=1 Tax=Phytophthora me... [more]
A0A7S4DKM3_HETAK5.140e-1336.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig923contigL-elsbetiae_contig923:24570..29114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.4
Seed ortholog evalue5.9e-95
Seed eggNOG ortholog2880.D7FQB3
Preferred nameGNPTG
KEGG koko:K04246,ko:K05546,ko:K08288,ko:K10087
KEGG ReactionR05980,R05981
KEGG Pathwayko00510,ko01100,ko01522,ko04141,ko04142,ko04915,map00510,map01100,map01522,map04141,map04142,map04915
KEGG ModuleM00073,M00074
Hectar predicted targeting categorymitochondrion
GOsGO:0000139,GO:0000271,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005794,GO:0005975,GO:0005976,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006605,GO:0006622,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0007034,GO:0007041,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016051,GO:0016256,GO:0016310,GO:0017177,GO:0019538,GO:0031090,GO:0031974,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034645,GO:0036211,GO:0042742,GO:0042802,GO:0042803,GO:0042886,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046835,GO:0046907,GO:0046983,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0061462,GO:0070013,GO:0070085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0098542,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.N-glycan processing
EggNOG OGsKOG2397@1,KOG2397@2759
EC3.2.1.84
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04030,ko04091
Ec32 ortholog descriptionalpha-Glucosidase II, beta subunit
Ec32 orthologEc-01_006760.1
Exons5
Model size1722
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig923.18247.1prot_L-elsbetiae_contig923.18247.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig923 25283..29095 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816995.4801748-UTR-L-elsbetiae_contig923:24569..252821622816995.4801748-UTR-L-elsbetiae_contig923:24569..25282Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig923 24570..25282 -
1691683969.3923955-UTR-L-elsbetiae_contig923:24569..252821691683969.3923955-UTR-L-elsbetiae_contig923:24569..25282Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig923 24570..25282 -
1622816995.5470545-UTR-L-elsbetiae_contig923:29095..291141622816995.5470545-UTR-L-elsbetiae_contig923:29095..29114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig923 29096..29114 -
1691683969.4592865-UTR-L-elsbetiae_contig923:29095..291141691683969.4592865-UTR-L-elsbetiae_contig923:29095..29114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig923 29096..29114 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816995.4913723-CDS-L-elsbetiae_contig923:25282..255411622816995.4913723-CDS-L-elsbetiae_contig923:25282..25541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 25283..25541 -
1691683969.4088366-CDS-L-elsbetiae_contig923:25282..255411691683969.4088366-CDS-L-elsbetiae_contig923:25282..25541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 25283..25541 -
1622816995.5030174-CDS-L-elsbetiae_contig923:26206..263731622816995.5030174-CDS-L-elsbetiae_contig923:26206..26373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 26207..26373 -
1691683969.4184158-CDS-L-elsbetiae_contig923:26206..263731691683969.4184158-CDS-L-elsbetiae_contig923:26206..26373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 26207..26373 -
1622816995.5144162-CDS-L-elsbetiae_contig923:27124..273401622816995.5144162-CDS-L-elsbetiae_contig923:27124..27340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 27125..27340 -
1691683969.4281945-CDS-L-elsbetiae_contig923:27124..273401691683969.4281945-CDS-L-elsbetiae_contig923:27124..27340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 27125..27340 -
1622816995.5245202-CDS-L-elsbetiae_contig923:28264..284091622816995.5245202-CDS-L-elsbetiae_contig923:28264..28409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 28265..28409 -
1691683969.4378352-CDS-L-elsbetiae_contig923:28264..284091691683969.4378352-CDS-L-elsbetiae_contig923:28264..28409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 28265..28409 -
1622816995.5362506-CDS-L-elsbetiae_contig923:28892..290951622816995.5362506-CDS-L-elsbetiae_contig923:28892..29095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 28893..29095 -
1691683969.4486775-CDS-L-elsbetiae_contig923:28892..290951691683969.4486775-CDS-L-elsbetiae_contig923:28892..29095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig923 28893..29095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig923.18247.1

>prot_L-elsbetiae_contig923.18247.1 ID=prot_L-elsbetiae_contig923.18247.1|Name=mRNA_L-elsbetiae_contig923.18247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MAVCTFARDRAARIAAAAAAEYFSSAGPQSSSSSSSYWSWMARAVVGALE
GYHDRGLPGISPLLDYRRYPALRSVVLRWDEFLDGDGKFLLVMWDAPVAL
RDFFLPPRDDDHERPEAAMLREGIARAKAILREGKADDAAATAGRTGAGA
LGKRRREEKEAKRLLGLDLGQRSRFAALAEKCLELQQAGYLYSLCPFKEA
KQDRSSLGRWQGWERREPGGAPAAMLSMMMLFDGGSRCHTGKRRSCEVLV
GCGPEDALTAAEELEIGLYRLSLETPLACTEAALREAEGRLEAFGGRQGL
RSEEAALLPGPAGSGDEDGAAASVERQEL*
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mRNA from alignment at L-elsbetiae_contig923:24570..29114-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig923.18247.1 ID=mRNA_L-elsbetiae_contig923.18247.1|Name=mRNA_L-elsbetiae_contig923.18247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4545bp|location=Sequence derived from alignment at L-elsbetiae_contig923:24570..29114- (Laminarionema elsbetiae ELsaHSoW15)
GGCCCCGCTGCGCGGCCTGATGGCGGTGTGCACCTTCGCCAGAGACCGGG
CGGCCAGGATCGCGGCCGCCGCGGCGGCGGAATACTTCTCCTCCGCCGGC
CCCCAGTCTTCGTCTTCGTCTTCCTCCTACTGGTCTTGGATGGCGCGGGC
TGTGGTTGGGGCTCTCGAGGGGTACCACGATCGCGGCCTGCCGGGCATAA
GTCCCCTCCTGGACTACAGAAGGTAAGCAGATAGCGAGGTGGAGGGAGAG
AGAGAGAGTGAGAAAAAGAGAAGGCGGGTACGCTTGCAGGGGAGTGGGGG
GGGTCAAAATCGTGGGGGAAGAGACAGGTATGTTCTTTTTCTCACGGTGT
CGGCATATTTTCTTACCCTCGGAAAAGATTGTCGCGCACCTGGAGCGATG
GCACGGGTGGCATATCGGTTTGTTTTTCTAGAGAAGGGGGAGGAGAAGAG
CAGGCACTGACCGCCGCCTAAGCGCACGCCGTCCTAACGTTATTGGGTCA
TTTCCTATTTGCTACTATTTTCTCGTGTTTTTAGCCCAAACGCCGTCTAA
ATTCAGAGGCATTTCCCGTTTCCTATATATTTAACATTCGTGTTTTTAGC
CCAAAACAAGCAACAAACGCCAAACCTTCTCTCGAGACCCAACGTTTTCT
GCCTGCCGCCGCCGGCAACACGGCTGACGTCACGTGGCACGAAACGACAC
GGCAGGTACCCAGCGCTGCGGTCCGTTGTCCTCCGTTGGGACGAGTTCTT
GGACGGCGATGGCAAGTTCCTGCTGGTCATGTGGGATGCCCCCGTTGCCC
TGAGGGACTTCTTTCTCCCGCCTCGTGATGACGACCACGAGAGGCCGGAG
GTATGTGTGTACATGCGTGCGCCGTGCTTCGTACGGTCGTTTGTTTGGGG
GGGTGCACACAGAATGGGCCGTGTGGTGCGCGGGTGGTATGTATGCGCGT
CGTGCTGCCTTGCTGCTGTGGGCTGGGGCATGATCGCTAGAAAAGCCGCG
GGTCCTGCCAACACTGCACACGTCCAACTTTTGGAAGCTGCGCTCACAGA
AGGCATGGTTCTAGCAGGCGCTTCCAAAACTTTGAGCGTGGAGTTTCGTG
TACGAGTTTTAACTTGGACTTGACGTTTGTAAATGGCTCCTGAGGACATC
GCTTGTGGGTCACTGAAATTCCGGCGATGGGCTAAAAACTATGGCTCGCT
CCGTCTCAGCACACCCTTCAATCAAGGCTTTGGAGCTTTGAAGGGCACGT
ACAGATGTACTTCGAGTATGTACATACTGTAGGTGCTGTTGTTGTCGTGC
TTGTGAAGTATGACAACACCTGAGAAAACTGAACAAATTCCAAGCGTAAC
CGTGCCCCCTCCCACCCCTCTATTTATCACGTAATTGCTCGAGGGGGGTG
CCCCCCTTATAATGTAGAGCTTGAAGTTTGAAACAGCCCGCCCTTCGTCT
CGAGCAGACAGTCTGCTGACCCCCTCTCCCCCTCCCGCACAAGCCTGCGG
TCGCCGGCTTCCTCTCCCCTCCTCCCCTTCGCCGTACAAGCGCGGTTCGT
ACCCTCCCCGGGTGCACATCAGCAGCGAAGAACGACAACAAACGCAAACA
AGAACGACAACACAACACAACAACTTCATTGAACAAAAAAACACAAGTAC
ACACTACAAAACAACGGCACAAGCACAAAAACAACAACAACAACAACAAC
AACGCCTTGCGTCGCGTCACCGGCCGTCGGCTGCGCAAACGGTGCCTACC
CATGCTATACATATATATATAAAGGCGGCCATGCTGCGCGAGGGCATTGC
TCGAGCCAAGGCGATACTGCGAGAGGGCAAGGCCGACGATGCCGCTGCTA
CCGCGGGAAGGACAGGGGCAGGGGCGCTCGGGAAGCGGCGACGAGAAGAG
AAGGAAGCGAAGCGGCTACTGGGGCTAGACCTGGGCCAGCGCTCGAGGTT
CGCTGCCCTGGCGGAGAAATGTCTCGAGCTTCAACAAGCGGTGCGTGCTT
CTGTTTGACTGGCGATGAGACGAAATGAGATCAGCAGTCTGGTTGGACAA
AGTTGTGCCCTGGGTTTTGGACGGGGAGGGTGGAGGTGGGGCGGGTTTCA
GGCCAGGACTGCGTCGGTTGCTTGTGCGGAGACCCTACATAGAGCAGAAA
TGTCCACAGAGGAGGTCTGCGGACTGATCCCAGTTTTACCTCAGAGTTTA
GGTTTGTGTGGATGCACCACGCGAGTGTGGATTCTGAATAGAGAAAAGAT
AAAACATGATTGGATAGTTATGTTGTCGGTGCGTCGGTTGCTTGTTCGGA
GACCCTATACCGCCTGTTTTTTTTGGGGCGTTTCATGTTGTCTTCCTGTG
TTGGCTGTCGAAAAGGGCCCACCAACCCTTCCCGTACCATCATCCGCCGT
CGCATTTGTGGAGGATTCCTCGTACTCGCGTGTTGCCGCCCCCTCTTGAG
TAGTTACTCTTGTGCCGCTGTGCCGCTGTGCTGCTCGCTCCGTCGTATCT
CTCCCCCTGTCGGTGCGGTGCTATCAGAATGGGAGTAGTCTAAAGAGGTT
GGCGTGGGCAATGGCCGTTAAATGACGCCCAAGGCATGCAACGACTGAGT
GCACTCTCCCCCTTCCCTCCCCCATGTTGCGCCGAATGCTTTCCGTGCTT
TGTTTGGGTTACGTGGACGCCATGGCCATGGCCATGGCCATGTTGCGGCT
CGTCACGGCGACCGGGCGGGCGAACGAACACGGGAGCACAGGGCTACCTG
TACAGCCTGTGCCCGTTCAAAGAGGCCAAGCAGGACAGGAGCAGCCTGGG
ACGGTGGCAGGGGTGGGAACGTAGGGAGCCGGGCGGCGCCCCGGCGGCGA
TGCTTTCGATGATGATGCTGTTCGACGGGGGCAGCCGCTGCCACACCGGG
AAGCGGAGGTGTGTGGTTTGGTGGTTTGTGGCGGGTGTTGTCTTGCGGTC
GTTTCGGTTTTCGGTTCTTCGTGTGCTTCCGTTTCTGCTCTCGTCGGTCG
GGTCTGGAAACCTGGAAACACGAGTGCTCGAGCGCGATCCGTGCGCCGCG
CTGGGACAGGCGCTCTTGCCCCCCCCCCCCCTTCCGGGCAGGCAGCAGGG
TAGGGTGATCAATCTTCTATGAGAGCACGTGACGGTGTGCAATGCGCCGA
AACTGAGGACGGTCGCAGCAGCCGAGAACAGTATTCTCCATGTATATCCT
TTCGTAGGAATACAGAGTCCTCCGCGCCGTATCCCCCTCCGACCAAGTCT
CTTGTCTTCCCTGTACCCTTGCGTCTGCCACCCACCACTACCTCATCAAC
AAACCCCACGGCGCTTCCGAAAACTTTGCACCAGGTACATATCTATCTAT
TAGAGGGTTAAGATCACTTGGTATATCTAAAGCTAAGGTACTGGCGCGCC
CCTACAGGGTTGTTCGCCGGATGCACAGCCAATGAAGCGAAACACAGAAG
GTGCCGCCGGTTAGTTTTTTTTGTTACTTGGATCACTTTACTTCAACACG
TGTCGGCCGGTTCGTTCGCAACTCGTGGTACATTTCTTGATCCGCTGCTT
GCTCGGGGATACCTTTTATGCAGGTCTTGCGAGGTGCTGGTGGGGTGCGG
GCCGGAGGACGCCCTCACGGCGGCGGAGGAGCTCGAGATCGGCCTGTACC
GCCTCAGCCTGGAAACCCCCCTGGCGTGCACCGAGGCCGCCCTGCGAGAG
GCGGAGGGGCGCCTAGAGGCCTTCGGGGGGCGGCAGGGGCTGAGATCGGA
GGAAGCGGCGCTACTTCCAGGGCCTGCTGGGAGCGGTGATGAGGACGGAG
CAGCCGCAAGCGTTGAGCGGCAGGAGTTGTAGCAGCGGGAAAAAAAGAAA
GCCCTGGGTGGTCGAAATACTCGAACCGCAGACACCCGCCGGCCAGTCCG
GAGAAAATGGACCAGTTAATAAACTCCGGGCACCTACATCGTCTAGTGTT
GATATTTTCTGTAGGTGTACACTTCTTCTGTAATGGCCTCCGTTTCGAAA
GTACGCCGTATTGTGAAACATGAGGATCTTTCGTAGACGCCCGCGGAGGT
TCGATCTGGACGCCGAGTTGAGTCAATACAGAGTCGAGGCACGATAATTT
TATCTATCCATCCATCCATCCGTGGGTGCGACTGGGCGGAAAGCACCACA
CACACACAACGCGGCCGAAAGGTTTTTGCAGAATTTCGCCGAATGCGCCT
TATGTTGTTTGGCATGACCGATATTCGCATTTTCTTCCTCACAGTACACA
CGATTGATTAAAAAATAAGACCAAGCCCACCACAGCACGGGGGACTTTGG
GTCAAGGCATGCCGTCGTACATACCGCTCATGCACAAATAAATGCGGTCC
CACAAATGACACCCGCCATGCACGAGTGCCAAACTCCATCCAAGAAAACA
GCAAAAGACATGTATAGTCTAGTCTATGTACGCCTCGTTTGCACCCACGC
ACACGCTGGTGCTCCAATTACCAGATAGACCCGTTTCGCACATACTACAA
GGAATTCGACAAACTGTGTACATAGGATTCCTGCAGTAGAGGCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig923:24570..29114-

>mRNA_L-elsbetiae_contig923.18247.1 ID=mRNA_L-elsbetiae_contig923.18247.1|Name=mRNA_L-elsbetiae_contig923.18247.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig923:24570..29114- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGTGTGCACCTTCGCCAGAGACCGGGCGGCCAGGATCGCGGCCGC
CGCGGCGGCGGAATACTTCTCCTCCGCCGGCCCCCAGTCTTCGTCTTCGT
CTTCCTCCTACTGGTCTTGGATGGCGCGGGCTGTGGTTGGGGCTCTCGAG
GGGTACCACGATCGCGGCCTGCCGGGCATAAGTCCCCTCCTGGACTACAG
AAGATGGCGGTGTGCACCTTCGCCAGAGACCGGGCGGCCAGGATCGCGGC
CGCCGCGGCGGCGGAATACTTCTCCTCCGCCGGCCCCCAGTCTTCGTCTT
CGTCTTCCTCCTACTGGTCTTGGATGGCGCGGGCTGTGGTTGGGGCTCTC
GAGGGGTACCACGATCGCGGCCTGCCGGGCATAAGTCCCCTCCTGGACTA
CAGAAGGTACCCAGCGCTGCGGTCCGTTGTCCTCCGTTGGGACGAGTTCT
TGGACGGCGATGGCAAGTTCCTGCTGGTCATGTGGGATGCCCCCGTTGCC
CTGAGGGACTTCTTTCTCCCGCCTCGTGATGACGACCACGAGAGGCCGGA
GGTACCCAGCGCTGCGGTCCGTTGTCCTCCGTTGGGACGAGTTCTTGGAC
GGCGATGGCAAGTTCCTGCTGGTCATGTGGGATGCCCCCGTTGCCCTGAG
GGACTTCTTTCTCCCGCCTCGTGATGACGACCACGAGAGGCCGGAGGCGG
CCATGCTGCGCGAGGGCATTGCTCGAGCCAAGGCGATACTGCGAGAGGGC
AAGGCCGACGATGCCGCTGCTACCGCGGGAAGGACAGGGGCAGGGGCGCT
CGGGAAGCGGCGACGAGAAGAGAAGGAAGCGAAGCGGCTACTGGGGCTAG
ACCTGGGCCAGCGCTCGAGGTTCGCTGCCCTGGCGGAGAAATGTCTCGAG
CTTCAACAAGCGGCGGCCATGCTGCGCGAGGGCATTGCTCGAGCCAAGGC
GATACTGCGAGAGGGCAAGGCCGACGATGCCGCTGCTACCGCGGGAAGGA
CAGGGGCAGGGGCGCTCGGGAAGCGGCGACGAGAAGAGAAGGAAGCGAAG
CGGCTACTGGGGCTAGACCTGGGCCAGCGCTCGAGGTTCGCTGCCCTGGC
GGAGAAATGTCTCGAGCTTCAACAAGCGGGCTACCTGTACAGCCTGTGCC
CGTTCAAAGAGGCCAAGCAGGACAGGAGCAGCCTGGGACGGTGGCAGGGG
TGGGAACGTAGGGAGCCGGGCGGCGCCCCGGCGGCGATGCTTTCGATGAT
GATGCTGTTCGACGGGGGCAGCCGCTGCCACACCGGGAAGCGGAGGGCTA
CCTGTACAGCCTGTGCCCGTTCAAAGAGGCCAAGCAGGACAGGAGCAGCC
TGGGACGGTGGCAGGGGTGGGAACGTAGGGAGCCGGGCGGCGCCCCGGCG
GCGATGCTTTCGATGATGATGCTGTTCGACGGGGGCAGCCGCTGCCACAC
CGGGAAGCGGAGGTCTTGCGAGGTGCTGGTGGGGTGCGGGCCGGAGGACG
CCCTCACGGCGGCGGAGGAGCTCGAGATCGGCCTGTACCGCCTCAGCCTG
GAAACCCCCCTGGCGTGCACCGAGGCCGCCCTGCGAGAGGCGGAGGGGCG
CCTAGAGGCCTTCGGGGGGCGGCAGGGGCTGAGATCGGAGGAAGCGGCGC
TACTTCCAGGGCCTGCTGGGAGCGGTGATGAGGACGGAGCAGCCGCAAGC
GTTGAGCGGCAGGAGTTGTAGGTCTTGCGAGGTGCTGGTGGGGTGCGGGC
CGGAGGACGCCCTCACGGCGGCGGAGGAGCTCGAGATCGGCCTGTACCGC
CTCAGCCTGGAAACCCCCCTGGCGTGCACCGAGGCCGCCCTGCGAGAGGC
GGAGGGGCGCCTAGAGGCCTTCGGGGGGCGGCAGGGGCTGAGATCGGAGG
AAGCGGCGCTACTTCCAGGGCCTGCTGGGAGCGGTGATGAGGACGGAGCA
GCCGCAAGCGTTGAGCGGCAGGAGTTGTAG
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