mRNA_L-elsbetiae_contig9210.18232.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9210.18232.1
Unique NamemRNA_L-elsbetiae_contig9210.18232.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 2.170e-94
Identity = 252/472 (53.39%), Postives = 280/472 (59.32%), Query Frame = 1 
Query:    1 ECAVCAPGYGRGVADACHECTVQFKGGMYFVLAVGLLLTVVVATLLAVYLVGGRGAVSTTVTNTRQSVRMLQRRGSGLLRTDAGGR-FDIGTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARASSRFMSFSSWGSSGRNKSAGTGGAPQIRPVKTGTASGGASDLTTVPTGQGAASGSTGA-----------PAAXXXXXXA---------VRGAETGEKGGSSRETIGNSASGRSLPPSAAPAVRGPGLVGGEREKGDGGXXXXXXXXXXXXXXXXXXXAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGSNASTAAESRDSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSGLVPPSTVSMSVGEEGLRRRPRPSARRVWKNGPGDPADVEQ 1353
            +CAVCA GYGRGVA+ACH CT  FKGGMYFVL V  LLT  VA LLAVYLVGGRGAVS T+TNTR+  R LQRRGSGLLR +   R FD   SG                             +  + RFM    WG   R KSA  G  P      +  A+ G     T   G G+   S GA           PAA      A         +R A+   +  +S  T+G+S+SG  L   AAPAVRGPG        G  G   XXXXXXXXXXXXXXXXAAR+GE+L+ LPLSKLKIVVVVWQIS+AF+EITKVPFPPVYEKFL IIGIFSFDLGW++SAACLTAGIDFYDKLLIVTIGPVGLLLLLG TFYLGARPVRKG    T A S  SS G                XXXXXXXXXXX                     + R RPSARRVW+NGPGD +D+EQ
Sbjct:  410 QCAVCASGYGRGVANACHLCTASFKGGMYFVLGVTALLTFFVAALLAVYLVGGRGAVSNTLTNTREWARTLQRRGSGLLRWEGTTRRFDFRASGGGSEGHPTKGSGALKSVGEESDGGE----SGGTGRFMGV--WG---RRKSASIGAPPPGATATSAAAATGPLSSVTDIKGGGSKPDSAGAVGAGFVPPARSPAAAAAWDAAAGSALVHPTMRRADKEGEADASNNTVGSSSSGSGLQSCAAPAVRGPG-------SGGKGACGXXXXXXXXXXXXXXXXAARVGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMMSAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRVIDTRARSNASSSGSVSPHAPAASDSARGTXXXXXXXXXXXXXXXXXX----XXXXXXXRARQGRARPSARRVWRNGPGDESDLEQ 861
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.130e-85
Identity = 225/504 (44.64%), Postives = 257/504 (50.99%), Query Frame = 1 
Query:    1 ECAVCAPGYGRGVADACHECTVQFKGGMYFVLAVGLLLTVVVATLLAVYLVGGRGAVSTTVTNTRQSVRMLQRRGSGLLRTDAGGR-FDIGTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARASSRFMSFSSWGSSGRNKSAGTGGAPQIRPVKTGTASGGASDLTTVPTGQGAASGSTGAPAAXXXXXXAVRGAETGEKGGSSRETIGNSA---------------------SGRSLPPSAAPAVRGP-----GLVGGEREKGDGGXXXXXXXXXXXXXXXXXXXAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKG--------SNASTAAESRDSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSGLVPPSTVSMSVGEEGL------------------RRRPRPSARRVWKNGPGDPADVEQ 1353
            +CAVCA GYGRGVA+ACH CT  FKGGMYFVLAV  LLT+ V  LLAVYLVGGRGAVS T+TNTR+SVRMLQ+RGSGLLR++   R FD   SG                             +  S RFM     G+ GR  SA  G   +   +    A+ G S       G G    S G   A        R A                                      SGR L PSAAPAVRGP     G  GG+++   GG                   AARIGE+L+ LPLSKLKIVVVVWQIS+AF+E+TKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAGIDFYDKLLIVTIGPVGLLLLLG TFYLGARPVR G        +N ST+  S  ++                             RA +      T S +                        + R RPSARRVW+NGPGD +D+EQ
Sbjct:  676 QCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAVYLVGGRGAVSNTMTNTRESVRMLQKRGSGLLRSEGTTRRFDFSASGGWSSWQHPTKGGDPLKSVGEESDGGE---SGGSGRFM-----GAWGRRMSASIGVPMRGAAITCAAAATGPSSSVNDSKGAGNKLDSAGTMGADFLPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRGLQPSAAPAVRGPRGDGKGARGGQQQGMGGGDRKKKTA------------AARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRTGRVIDMSFRNNTSTSVSSATAA--------------TLAAYDSGISGSVRPRAGASDSARGTASTTAXXXXXXXXXXXXXXXXXXXXXXXQGRARPSARRVWRNGPGDESDIEQ 1145
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 3.880e-74
Identity = 241/483 (49.90%), Postives = 266/483 (55.07%), Query Frame = 1 
Query:    1 ECAVCAPGYGRGVADACHECTVQFKGGMYFVLAVGLLLTVVVATLLAVYLVGGRGAVSTTVTNTRQSVRMLQRRGSGLLRTDAGGR-FDIGTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARASSRFMSFSSWGSSGRNKSAGTGGAPQIRPVKTGTASGGASDLTTVPTGQGAASGSTGAPAAXXXXXXAVRGAETGEKGGSSRETIGNSASGRSLPPSAAPAVRGPGLVGGEREKGDGGXXXXXXXXXXXXXXXXXXX------------AARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKG-----SNASTAAESRDS----------SGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSGLVPPSTVSMSVGEEGLRR----RPRPSARRVWKNGPGDPADVEQ 1353
            +CAVCAPGYGRGVA+ACH CT  FKGGMYFVLAV  LLT+ VA LLAVYLVGGRGAVSTT+TNTR+SVRMLQRRGSGLLR++   R F+   SG                             +  S RF+     G+ GR KS   G                         G G+ S S G   A        R                                                XXXXXXXXXXXXXXXXXXX            AARIGE+L+ LPLSKLKIV+VVWQIS+AF+EITKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAG+DFYDKLLIVTIGPVGLLLLLG TFYLGARPVRKG     S+ STA++S  S          SG        XXXXXXXXXXXXX    XXX                      R    R RPSARRVW+NGPGD +D+EQ
Sbjct: 1137 QCAVCAPGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTNRRFNFSASGDGSSGEHPSKSGGALKSVGEESDGGE---SGGSGRFL-----GAWGRRKSTRIGAPXXXXXXXXXXXXXXXXXSVNDSKGAGSKSDSAGTVVAGFAPLARSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARIGEMLARLPLSKLKIVIVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGVDFYDKLLIVTIGPVGLLLLLGFTFYLGARPVRKGRIVDMSSRSTASDSVSSATVATLEAYDSGSSRSVRPQXXXXXXXXXXXXXARGTXXXXXXXXXXXXXXXXXXXXXXXXXRARQGRARPSARRVWRNGPGDESDIEQ 1611
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 1.230e-67
Identity = 211/473 (44.61%), Postives = 240/473 (50.74%), Query Frame = 1 
Query:    1 ECAVCAPGYGRGVADACHECTVQFKGGMYFVLAVGLLLTVVVATLLAVYLVGGRGAVSTTVTNTRQSVRMLQRRGSGLLRTDAGGR-FDIGTSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARASSRFMSFSSWGSSGRNKSAGTGGAPQIRPVKTGTASGGASDLTTVPTGQGAASGSTGAPAAXXXXXXAVRGAETGEKGGSSRETIGNSASG---------------------RSLPPSAAPAVRGPGLVGGEREKGDGGXXXXXXXXXXXXXXXXXXXAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGSNASTAAESRDSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSGLVPPSTVSMSVGEEGLRRRPRPSARRVWKNGPGDPADVEQ 1353
            +CAVCA GYGRGVA+ACH CT  FKGGMYFVLAV  LLT+ VA LLAVYLVGGRGAVSTT+TNTR+SVRMLQRRGSGLLR++   R F    SG                             +  S RF+     G+ GR KSA  G AP    + T +A+G     +    G G+ + S G   A        R A                                        R L PSAAPAVRGP                XXXXXXXXXXXXXXXXAARIGE+L+ LPLSKLKIVVVVWQIS+AF+EITKVPFPPVYEKFL IIGIFSFDLGW+ISAACLTAGIDFYDKLL                         +G  AS  A +                                             + +  E   + R RPSARRVW+NGPGD +D+EQ
Sbjct: 1026 QCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRESVRMLQRRGSGLLRSEGTTRRFHFSASGGGSSGGHPTKGSSALKSVGEESDGGE---SGGSGRFL-----GAWGRRKSASIG-APPPGAITTSSAAGSGPSSSVNDKGAGSKADSAGTVGAGFVPLARSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQPSAAPAVRGPXXXXXXXXX-------XXXXXXXXXXXXXXXXAARIGEMLARLPLSKLKIVVVVWQISNAFAEITKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLL-------------------------RGKGASRTAMA---------------------------------------------AAAAAERARQGRARPSARRVWRNGPGDESDLEQ 1412
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.440e-37
Identity = 85/150 (56.67%), Postives = 104/150 (69.33%), Query Frame = 1 
Query:  697 VGGEREKGDGGXXXXXXXXXXXXXXXXXXXAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGS---NASTAAESRDSSGG 1137
            VGG R +G GG                     R+  +L+ LPLSKLKIV+VVWQI+SAF++ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+  L  LG TF++G+RP ++ +   NA+TA      SGG
Sbjct: 1228 VGGSRGQGTGGTGNDRDDDAPP---------TRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGG 1368
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.140e-27
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1 
Query:  793 RIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRK 1089
            R+  +L+ LPLSKLKIV+          +ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLLIVTIGP+  L  LG TF++G+RP ++
Sbjct: 1068 RVANLLAALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLFFLGITFFVGSRPAKE 1156
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 2.920e-27
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1 
Query:  793 RIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRK 1089
            R+  +L+ LPLSKLKIV+          +ITK PFPP+YEKFL IIGIFSFDLGW++SAACLT GIDFYDKLL+VTIGP+  L  LG TF++G+RP +K
Sbjct: 1028 RVANLLTALPLSKLKIVI----------DITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLMVTIGPLLPLCFLGITFFVGSRPAKK 1116
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.000e-24
Identity = 106/235 (45.11%), Postives = 121/235 (51.49%), Query Frame = 1 
Query:  649 RSLPPSAAPAVRGPGLVGGEREKGDGGXXXXXXXXXXXXXXXXXXXAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGSNASTAAESRDSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSGLVPPSTVSMSVGEEGLRRRPRPSARRVWKNGPGDPADVEQ 1353
            R L PSAAPAVRGP                XXXXXXXXXXXXXX  A RIGE+L+ LPLSK            AF+EITKVPFPPVYEKFL IIG FSF LGW+ISAACLTAG DFYDKLL+ +     L     G     +  VR  + AS  A    S+                             R   G    +       E   + R RPSARRVW++GPGD +D+EQ
Sbjct:  154 RGLQPSAAPAVRGPXXXXXXXXX-------XXXXXXXXXXXXXXTAAVRIGEMLARLPLSKDC-------RRCAFAEITKVPFPPVYEKFLSIIGTFSFGLGWVISAACLTAGNDFYDKLLVSSATAATLAAYDSGI----SGSVRTRAGASDPARGTTST-------------------------TATTRRGKGPSRTAXXXXXXXERARQGRARPSARRVWRSGPGDESDIEQ 345
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 1.240e-16
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 1 
Query:  817 LPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGSNAST---AAESRDSSGG 1137
            LP+ KLKI+VVVWQI S F  IT V FPP Y +FL  I + SFDLG ++SA+C+   +DFY  LL+ T+GP+G+ ++L  T+++  R    GS  S    AA SR  + G
Sbjct: 1106 LPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAGAGSAGSLMRRAAWSRHMAAG 1215
[Close]
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.140e-14
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 1 
Query:  817 LPLSKLKIVVVVWQISSAFSEITKVPFPPVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLLGGTFYLGARPVRKGS 1095
            LP+ K+KI+VVVWQI S F  IT V FPP Y +FL  I + SFDL  ++SA+C+   +DFY +LL+ T+ P+G+ ++L  T+++  R    GS
Sbjct: 1113 LPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRAGSGS 1205
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9210.18232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5M2_ECTSI2.170e-9453.39Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7G0A8_ECTSI1.130e-8544.64Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JRA9_9PHAE3.880e-7449.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B0_ECTSI1.230e-6744.61Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K4A5_9PHAE2.440e-3756.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY9_ECTSI2.140e-2763.64Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G119_ECTSI2.920e-2763.64Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5JI42_9PHAE1.000e-2445.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH4_ECTSI1.240e-1647.27Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH3_ECTSI2.140e-1446.24Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9210contigL-elsbetiae_contig9210:515..5345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.9
Seed ortholog evalue5.3e-14
Seed eggNOG ortholog2880.D7FTI5
Hectar predicted targeting categorysignal anchor
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1353
Cds size1353
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9210.18232.1prot_L-elsbetiae_contig9210.18232.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9210 515..5345 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816994.4174867-CDS-L-elsbetiae_contig9210:514..6641622816994.4174867-CDS-L-elsbetiae_contig9210:514..664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 515..664 +
1691683968.6415777-CDS-L-elsbetiae_contig9210:514..6641691683968.6415777-CDS-L-elsbetiae_contig9210:514..664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 515..664 +
1622816994.4281778-CDS-L-elsbetiae_contig9210:1618..23151622816994.4281778-CDS-L-elsbetiae_contig9210:1618..2315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 1619..2315 +
1691683968.6521065-CDS-L-elsbetiae_contig9210:1618..23151691683968.6521065-CDS-L-elsbetiae_contig9210:1618..2315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 1619..2315 +
1622816994.4386353-CDS-L-elsbetiae_contig9210:2776..27991622816994.4386353-CDS-L-elsbetiae_contig9210:2776..2799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 2777..2799 +
1691683968.6613703-CDS-L-elsbetiae_contig9210:2776..27991691683968.6613703-CDS-L-elsbetiae_contig9210:2776..2799Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 2777..2799 +
1622816994.4490585-CDS-L-elsbetiae_contig9210:4225..43651622816994.4490585-CDS-L-elsbetiae_contig9210:4225..4365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 4226..4365 +
1691683968.6702907-CDS-L-elsbetiae_contig9210:4225..43651691683968.6702907-CDS-L-elsbetiae_contig9210:4225..4365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 4226..4365 +
1622816994.4619293-CDS-L-elsbetiae_contig9210:4879..49631622816994.4619293-CDS-L-elsbetiae_contig9210:4879..4963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 4880..4963 +
1691683968.679083-CDS-L-elsbetiae_contig9210:4879..49631691683968.679083-CDS-L-elsbetiae_contig9210:4879..4963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 4880..4963 +
1622816994.4743278-CDS-L-elsbetiae_contig9210:5086..53451622816994.4743278-CDS-L-elsbetiae_contig9210:5086..5345Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 5087..5345 +
1691683968.6877081-CDS-L-elsbetiae_contig9210:5086..53451691683968.6877081-CDS-L-elsbetiae_contig9210:5086..5345Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9210 5087..5345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9210.18232.1

>prot_L-elsbetiae_contig9210.18232.1 ID=prot_L-elsbetiae_contig9210.18232.1|Name=mRNA_L-elsbetiae_contig9210.18232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=451bp
ECAVCAPGYGRGVADACHECTVQFKGGMYFVLAVGLLLTVVVATLLAVYL
VGGRGAVSTTVTNTRQSVRMLQRRGSGLLRTDAGGRFDIGTSGSGSGSGS
GRGGKAAAATSKDGEGGGGSSSARASSRFMSFSSWGSSGRNKSAGTGGAP
QIRPVKTGTASGGASDLTTVPTGQGAASGSTGAPAAASAAGAAVRGAETG
EKGGSSRETIGNSASGRSLPPSAAPAVRGPGLVGGEREKGDGGRRSGGGG
EEEEKKKKKKTAAARIGEVLSGLPLSKLKIVVVVWQISSAFSEITKVPFP
PVYEKFLGIIGIFSFDLGWLISAACLTAGIDFYDKLLIVTIGPVGLLLLL
GGTFYLGARPVRKGSNASTAAESRDSSGGSGSGGGRGGEGDGNHGGGDGG
GDAASSRASSGLVPPSTVSMSVGEEGLRRRPRPSARRVWKNGPGDPADVE
Q
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mRNA from alignment at L-elsbetiae_contig9210:515..5345+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9210.18232.1 ID=mRNA_L-elsbetiae_contig9210.18232.1|Name=mRNA_L-elsbetiae_contig9210.18232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4831bp|location=Sequence derived from alignment at L-elsbetiae_contig9210:515..5345+ (Laminarionema elsbetiae ELsaHSoW15)
GAGTGCGCCGTGTGTGCCCCGGGTTATGGCAGGGGGGTGGCTGACGCCTG
CCACGAGTGCACGGTTCAGTTTAAGGGGGGCATGTACTTCGTGCTGGCCG
TGGGCCTGCTGCTGACGGTGGTCGTCGCCACGCTTCTGGCTGTGTATCTG
GTGAGTGGAGGGGGACAGGCAGGCAGGGGGGTAGGGAGGGAGGGGGGGGG
GCGAGGGGGGCAAGCCAAGCCCAGAAAAAGAATAGAGCGCGCGTGCTGTA
TTTCCGTTTTCGTGGAAGTCTGGTGTGTGTGTGATACATATACACGTGTA
CTTCTATGTATTTACATGAGGGGAGGCAGAAACAAGAAAAACAAAGTTAA
GAAAGGCAGGCAGACAGACCTACCTCTGTGTTGTGTTTTGTCATGCGTAA
CGTTTTGTGAGTTTCATGTCGATGTGCGTACCGTAGGTGACACAAGATAC
CACACCCCCTGGGTCGAATTTTAGAGCTCGATTACTCCGTAACGAAGAAG
GTGCCAGCTCCAAACAACACATTTCCGGACAGCCCTCGACCAGATCTTTC
CAACGCCATTCCTTTCGACACTGTCATTCTTCTCGCTGGGGAGGAATCGA
GCTTTGAAAATCTTTCCAGGGGGGTTGGTGTCTTGTGTCACCTGCAGTAC
AAACTTGGTCTCTCATCCCTCACGATCTTTGCCGTCCATCCATCCCATCA
TGTCGATCGCGATGATGGGCTTCGGTTCCCCCCCCTAGCTTTGGGGCGAG
TGAACTCTCTGCGACACCGTTTTTAATTAGAGCGTTTGAACAAATGTCAG
CAGTCTACATACGTCCAATCTGTGAAAAATTCGTTCCAGAGGGACTGTTG
TAGGCTTACTAACCCCCCGTTTTTGACCTGCCGAGCACAGCAGGCGAGAG
CGCCGCACGTACACAAGTAGCGCATACCATATGTATGAAAATATCCACTT
TTGGTGGCCAGAGTTCCTTACCATCCGCATTTATTTAGGCGTGTCTCGCT
CCTTTAGGGACTGCGCACCCATCGCGGCGGTTGCGAAATAAAAGTAAAGC
GGCGGCGACGAAACAAAGTGAGCGTCTTTTTCCCTGCCGTCATCGTCCTC
TCAGGTGGGCGGCAGGGGCGCCGTGTCGACAACCGTGACCAACACCCGCC
AGTCCGTGAGGATGTTGCAGAGGCGGGGCTCCGGCCTCCTTCGCACGGAC
GCGGGGGGCCGCTTCGACATCGGCACCAGCGGGAGCGGGAGCGGGAGCGG
GAGCGGAAGAGGAGGCAAGGCCGCCGCCGCCACCTCGAAAGACGGTGAAG
GCGGCGGTGGCAGCAGCAGCGCCCGCGCAAGCAGCCGCTTCATGAGCTTC
AGCTCGTGGGGCAGCAGCGGCCGGAACAAGAGCGCGGGCACCGGGGGGGC
TCCGCAGATCCGTCCCGTCAAGACCGGAACCGCCAGCGGCGGCGCCTCCG
ACCTCACTACCGTCCCCACCGGCCAAGGGGCCGCGAGCGGCTCGACCGGC
GCTCCCGCGGCGGCGTCTGCTGCGGGCGCCGCCGTGCGTGGGGCCGAAAC
CGGAGAGAAGGGGGGCAGCAGCCGCGAGACGATAGGCAACTCCGCTAGCG
GCCGCTCCCTGCCCCCGTCCGCCGCCCCGGCGGTGCGAGGTCCTGGGCTG
GTGGGAGGAGAAAGGGAGAAGGGGGACGGCGGGCGGCGCAGCGGCGGCGG
CGGCGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGACGGCGGCGGCGAGGA
TCGGCGAGGTGCTGTCGGGGCTGCCCCTGTCCAAGCTCAAGATCGTCGTA
GGTAGGGGTCATACGTACGTACGATCTACTTCGAGGAGGAATGCATGCAT
GCATGCGGGCAGGCAGATACAGACCTCCGGTGCTTCTTCTGTGCCGTTCG
TTTGACGCTCCCCCCAAACCTGTCTGCGACTCTTGAGAGTTACCCCCCTC
TCCCTTTCTCTCTCCGCCCCTCCCTCTTTATTTGTCTGCCTCTGCCTCTG
TGCCTCTGTGCCTCTGTGCCTCTGTGCCTCTGTGCCCCTCTCCCTCTCTC
CCCCGCTTGCACACACACGAACACATGTTTGCGCTTTTCCGTAACGTCCG
TATTGTTTGCCTTCGTATGCGCCTTCTCGCGCTTTTGCGCGTTTCGTTTC
TTCGTATCCGGCCGCGTTCCCCCCGCCTACCTACTCCTCTGTTCTTTCTC
TCCGCGGAACCCCTTGCCAATTAAACCGACGGGCTGCCTGGTGGCAAACC
GACGCGATATAGTGGTGTGGCAAATCTCAAGCGCGGTGAGTTTCTGCACT
TGAGTCACGCCAGTGTGGTACGATTGGTGTTGCAATGTTGTGACCGGCTC
CCCATCTGGTGGCGTTGATTTGGACCCAGCAGGCTGATGTCCTGTCCATA
TGGCCAGCCAGTTGTAGCGTGGTCGATCCTAATTAAGAAACACAAACGCT
GGTACGAGCTAGGAGGCGGGGTGAGCTCAGAGGAACTCTTATGCACGCGC
TGCCTTCACGAGCCGCATAATATCTTGGCAACTGAGGTTAGTTCCCGAGG
AGCCTTCATGTCAGGCGGTCGCAATGCTTATCTAGACTGAAAGCGTTGTC
ATTTGATTTGGCCCTCTAAGATACTGACGTCTCTTCATTGGTTAACCGGT
TACCGCGGTCGATGCCAACTGAGAAAGGACACCTATTCCATCCGCATAAC
CATATACACACCCACCCACACGCATGACACACGCGCGCGCGGGGGGGGAT
GTTGTGGGTCGCATGAACACACACGGATCTCTTGGACGCGCTTGCTTGCT
TGGTAGCGATCGAAACTGCCTCTCATTTCGCGTACGGAAAATCGGCCGTG
CGGATGGTTCTAGTAGTGCCGGCCTGGTCGAAGCCTTCACAAGATATCGG
TCAGTCGGAGAGTTGTTTGGATCGAACAAGGCGCTCGTCGGTCTATGTAG
ACTACCGTAGGTGACACAAGATACCACGGTTATATTTTAAAAGTTCGATT
CTTCCCCAGCAAGAAGAGCACCAGTGCCGAAATGGGGTGGCGTTGGAAAT
ATCTAGTCGAGGGCTGGCCAAAAAGTTGTCGTTTGGTGCTGCTGGCAACC
TCTTCGCTATGGAATAATCGAGCTTTTTCAATATCTGTCCAGGGGCATGG
GGGGGGGGGGGGGGGGGGGGGTGGGGTGGTACCGTTTGGTCGGTGGGGGG
GGGGGGAGGAGGGGGGTGTGGGGTGGCCTTTGTTTCTCCTTCTGCTNNNN
NNNNNNTGGGTTGCTGGGGTGTGGGGGTGGGTGGGGGGGGGTGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGCTGGTACCTTGTGCCATCTACGGTAAGGGTGAACAGCGTGTTGATGGC
CGCGCTCTCCCTTTCCCTCTCGCCATCTCTCCTTTTTCCCTTAAAACCTG
GCCTACTTTCTATTGACGACACCCGATGTACGTCTGTTTCATTGGAATTT
CCAACCCAAACTGGTTGTTTCTCCGCGATTTCAAGTCTTGTTTTCGATTT
CGAGTGTGGTACATACCGATAAGGGCCTGTCAAAAGATCGTCGATTTTTC
GTCTGTCGTTATCGTCGCCATCATCATCATCATCGCTCCCGTTCGCTCCC
CACGTTTTCGCGACGTGGTCGGATCCACCCACCGGGTCTACGAAAAATCA
AATCCGACCAGTTCTCGGAGATCACCAAGGTGCCGTTCCCCCCCGTGTAC
GAGAAGTTCTTGGGCATCATCGGGATATTCTCGTTCGATCTGGGCTGGCT
CATCTCGGCGGCCTGCCTGACCGCAGGCATCGACTTCTACGATAAGCTGC
TGTGAGTTGCTTGCTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGGTGTTGTTGTTGCTGCTTGTTGTT
GTTGTTGTTGTCGTTGTTGTTGTTATTGTTGTTGTTGTTGCTGCTGCTTG
TTGTTGTTGTTGCTTGTTGTTGTTGCTGCTGCTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGCTGCTTGTTGTTGCTGTTGTTGTGGTTGCTGTT
GCTGCTGTTACTGTTGCTTGCTGTTGGTGGTAGTGGTGGCGGAGTCATTA
TTTCGTTGTTGCTGTTGCTGTTGCTGTTGCTGTTCTTGTATGTATGGTGT
GTTTTCGAAAGACGTCGCCGCCTGAAGCCAGCGCGCACAGCGCTGCTACC
CCCACGTGTTGTGTAAAAACCCACACGCCGTGGCCCTTCAACACCCATTG
CTTTGCTAAGCAATCATCGCTCGGCACGGCACTCCCTCCACGCCCCGAAC
ATCTCGACCACGCAGGATCGTGACCATCGGGCCGGTGGGCCTCCTCCTGC
TGCTCGGCGGAACCTTTTACCTCGGCGCGCGCCCGGTCCGCAAGGGCAGG
TTCCTCCTCGCCGACAGCATGCGCGGCAGCGGCACCGGTAGGGCCCTGTC
CTTCATGTCGAGGTCGAGGAGCGCCACCACCACCAGCGCTAGTACCAGCA
CCACCACCTCCACCCGCCGGAGCAACGCGTCCACCGCCGCCGAGTCCAGG
GACAGCAGCGGCGGAAGCGGCAGCGGTGGCGGGCGCGGGGGGGAGGGAGA
CGGCAACCACGGCGGTGGCGATGGCGGCGGTGACGCGGCGTCCTCCCGGG
CTTCGTCGGGCCTGGTGCCGCCGTCGACGGTGTCGATGTCGGTGGGGGAG
GAGGGGCTGCGGCGCCGGCCGCGGCCGTCCGCCAGGAGGGTGTGGAAGAA
CGGCCCGGGGGATCCGGCGGACGTGGAGCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9210:515..5345+

>mRNA_L-elsbetiae_contig9210.18232.1 ID=mRNA_L-elsbetiae_contig9210.18232.1|Name=mRNA_L-elsbetiae_contig9210.18232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2706bp|location=Sequence derived from alignment at L-elsbetiae_contig9210:515..5345+ (Laminarionema elsbetiae ELsaHSoW15)
GAGTGCGCCGTGTGTGCCCCGGGTTATGGCAGGGGGGTGGCTGACGCCTG
CCACGAGTGCACGGTTCAGTTTAAGGGGGGCATGTACTTCGTGCTGGCCG
TGGGCCTGCTGCTGACGGTGGTCGTCGCCACGCTTCTGGCTGTGTATCTG
GAGTGCGCCGTGTGTGCCCCGGGTTATGGCAGGGGGGTGGCTGACGCCTG
CCACGAGTGCACGGTTCAGTTTAAGGGGGGCATGTACTTCGTGCTGGCCG
TGGGCCTGCTGCTGACGGTGGTCGTCGCCACGCTTCTGGCTGTGTATCTG
GTGGGCGGCAGGGGCGCCGTGTCGACAACCGTGACCAACACCCGCCAGTC
CGTGAGGATGTTGCAGAGGCGGGGCTCCGGCCTCCTTCGCACGGACGCGG
GGGGCCGCTTCGACATCGGCACCAGCGGGAGCGGGAGCGGGAGCGGGAGC
GGAAGAGGAGGCAAGGCCGCCGCCGCCACCTCGAAAGACGGTGAAGGCGG
CGGTGGCAGCAGCAGCGCCCGCGCAAGCAGCCGCTTCATGAGCTTCAGCT
CGTGGGGCAGCAGCGGCCGGAACAAGAGCGCGGGCACCGGGGGGGCTCCG
CAGATCCGTCCCGTCAAGACCGGAACCGCCAGCGGCGGCGCCTCCGACCT
CACTACCGTCCCCACCGGCCAAGGGGCCGCGAGCGGCTCGACCGGCGCTC
CCGCGGCGGCGTCTGCTGCGGGCGCCGCCGTGCGTGGGGCCGAAACCGGA
GAGAAGGGGGGCAGCAGCCGCGAGACGATAGGCAACTCCGCTAGCGGCCG
CTCCCTGCCCCCGTCCGCCGCCCCGGCGGTGCGAGGTCCTGGGCTGGTGG
GAGGAGAAAGGGAGAAGGGGGACGGCGGGCGGCGCAGCGGCGGCGGCGGC
GAGGAGGAGGAGAAGAAGAAGAAGAAGAAGACGGCGGCGGCGAGGATCGG
CGAGGTGCTGTCGGGGCTGCCCCTGTCCAAGCTCAAGATCGTCGTAGGTG
GGCGGCAGGGGCGCCGTGTCGACAACCGTGACCAACACCCGCCAGTCCGT
GAGGATGTTGCAGAGGCGGGGCTCCGGCCTCCTTCGCACGGACGCGGGGG
GCCGCTTCGACATCGGCACCAGCGGGAGCGGGAGCGGGAGCGGGAGCGGA
AGAGGAGGCAAGGCCGCCGCCGCCACCTCGAAAGACGGTGAAGGCGGCGG
TGGCAGCAGCAGCGCCCGCGCAAGCAGCCGCTTCATGAGCTTCAGCTCGT
GGGGCAGCAGCGGCCGGAACAAGAGCGCGGGCACCGGGGGGGCTCCGCAG
ATCCGTCCCGTCAAGACCGGAACCGCCAGCGGCGGCGCCTCCGACCTCAC
TACCGTCCCCACCGGCCAAGGGGCCGCGAGCGGCTCGACCGGCGCTCCCG
CGGCGGCGTCTGCTGCGGGCGCCGCCGTGCGTGGGGCCGAAACCGGAGAG
AAGGGGGGCAGCAGCCGCGAGACGATAGGCAACTCCGCTAGCGGCCGCTC
CCTGCCCCCGTCCGCCGCCCCGGCGGTGCGAGGTCCTGGGCTGGTGGGAG
GAGAAAGGGAGAAGGGGGACGGCGGGCGGCGCAGCGGCGGCGGCGGCGAG
GAGGAGGAGAAGAAGAAGAAGAAGAAGACGGCGGCGGCGAGGATCGGCGA
GGTGCTGTCGGGGCTGCCCCTGTCCAAGCTCAAGATCGTCGTAGTGGTGT
GGCAAATCTCAAGCGCGTGGTGTGGCAAATCTCAAGCGCGTTCTCGGAGA
TCACCAAGGTGCCGTTCCCCCCCGTGTACGAGAAGTTCTTGGGCATCATC
GGGATATTCTCGTTCGATCTGGGCTGGCTCATCTCGGCGGCCTGCCTGAC
CGCAGGCATCGACTTCTACGATAAGCTGCTTTCTCGGAGATCACCAAGGT
GCCGTTCCCCCCCGTGTACGAGAAGTTCTTGGGCATCATCGGGATATTCT
CGTTCGATCTGGGCTGGCTCATCTCGGCGGCCTGCCTGACCGCAGGCATC
GACTTCTACGATAAGCTGCTGATCGTGACCATCGGGCCGGTGGGCCTCCT
CCTGCTGCTCGGCGGAACCTTTTACCTCGGCGCGCGCCCGGTCCGCAAGG
GCAGGATCGTGACCATCGGGCCGGTGGGCCTCCTCCTGCTGCTCGGCGGA
ACCTTTTACCTCGGCGCGCGCCCGGTCCGCAAGGGCAGCAACGCGTCCAC
CGCCGCCGAGTCCAGGGACAGCAGCGGCGGAAGCGGCAGCGGTGGCGGGC
GCGGGGGGGAGGGAGACGGCAACCACGGCGGTGGCGATGGCGGCGGTGAC
GCGGCGTCCTCCCGGGCTTCGTCGGGCCTGGTGCCGCCGTCGACGGTGTC
GATGTCGGTGGGGGAGGAGGGGCTGCGGCGCCGGCCGCGGCCGTCCGCCA
GGAGGGTGTGGAAGAACGGCCCGGGGGATCCGGCGGACGTGGAGCAGCAA
CGCGTCCACCGCCGCCGAGTCCAGGGACAGCAGCGGCGGAAGCGGCAGCG
GTGGCGGGCGCGGGGGGGAGGGAGACGGCAACCACGGCGGTGGCGATGGC
GGCGGTGACGCGGCGTCCTCCCGGGCTTCGTCGGGCCTGGTGCCGCCGTC
GACGGTGTCGATGTCGGTGGGGGAGGAGGGGCTGCGGCGCCGGCCGCGGC
CGTCCGCCAGGAGGGTGTGGAAGAACGGCCCGGGGGATCCGGCGGACGTG
GAGCAG
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