mRNA_L-elsbetiae_contig921.18231.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig921.18231.1
Unique NamemRNA_L-elsbetiae_contig921.18231.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 1.320e-137
Identity = 349/618 (56.47%), Postives = 369/618 (59.71%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLNGLFLPRARAIADARESGRHSGTAAAANPVSPSTAAVAAAVPGSGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGGSIGVTAVTAXXXXXXXXXSLGGDGDDDAPLLQSPPVLSSGAGPAEAGXXXXXXAGRACLLPPDVWAAIDSG-ELAPGGTLPPXXXXXXXXXXXXPAPPAGPAGIAXXXXXXXXXXXXXXATTAAATDAEHGVVADVSRPGGKADGSRPGRGRFELGRDEMAAAGRLSHGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMADELTNLQDIYLHAVTRYVRLQREADAYLASSKPPGDHDXXXXXXXXXXXXXXXXRXXXXXXXXXXXXRGGKREGE-GDRRARLLEVAGRLAPAVGF-EDSEGSLKDIR-------------------------AEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1770
            +VFLESVLLEIRANDWQRAA EAQEALKVH GAGRLWAVLVQLKQR+SDQAQQASLKQA  EVPKSGEVWCEGARIHLNPLSKAFDL+TAGKYLGFAVQFTPQYGDSFMECLRLGLLN +FLP+ARAIADARE                                                        XXXXXXXXXXXXXXXXXXXXXXXX                G  G+T             + GGDGD   P   +      G    +A       A  A  +     AA+D   E         XXXXXXXXXX  P+P                                               G  PG GRFELG DE+AAAGRLS GDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMA+ELTNLQD+YLHAVTR+V LQREADAYLAS KP  +    XXXXX   XXXXX R      XXXXXX          +RRARLLEVAGRLAP VGF E+  G LK+IR                         AEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP
Sbjct:  632 KVFLESVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDIFLPKARAIADAREK-------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXLLLPSEAASPGRVEREGVEGMTTPVKEAPREAVKHAGGGDGDSGGPADGTRAARPEGDDVVDA------VAATAVAV-----AAVDGKQEXXXXXXXXXXXXXXXXXXXDEPSP-----------------------------------------------GRVPG-GRFELGEDEVAAAGRLSPGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMAEELTNLQDVYLHAVTRHVLLQREADAYLASRKPLEEETEGXXXXXSARXXXXXRRHHGGGVXXXXXXXXXXXXXXXAERRARLLEVAGRLAPPVGFGEEGGGGLKNIRGRNRPEVTIESPSVLGLLPFYPAAGAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1135
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 1.360e-134
Identity = 375/659 (56.90%), Postives = 395/659 (59.94%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLNGLFLPRARAIADARESGRHSGTAAAAN--------PVSPSTAAVAAAVPGSGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGGSIGVTAVTAXXXXXXXXXSLGGDGDDDAPLLQSPPVLSSGAGPAEAGXXXXXXA--GRACLLPPDVWAAIDSGELA----PGG-------------------------------------------------TLPPXXXXXXXXXXXXPAPPAGP----AGIAXXXXXXXXXXXXXXATTAAATDAEHGVVADVSR-PGGKADGSRPGRGRFELGRDEMAAAGRLSHGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMADELTNLQDIYLHAVTRYVRLQREADAYLASSKPPGDHDXXXXXXXXXXXXXXXXRXXXXXXXXXXXXRGGKREGEGDRRARLLEVAGRLAPAVGF-EDSEGSLKDIRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1770
            +VFLESVLLEIRANDWQRAA EAQEALKVH GAGRLWAVLVQLKQR+SDQAQQASLKQA  EVPKSGEVWCEGARIHLNPLSKAFDL+TAGKYLGFAVQFTPQYGDSFMECLRLGLLN LFLP+ARAIADARE                    P+  S+ AV+ A                                         XXXXXXX                         ++ V AV      XXXXX                             XXXXXXA   R+ LLPP VWAAID G+ A    PGG                                                 ++  XXXXXXXXXX    P A P    A   XXXXXXXXXXXXXX            V AD S  PG    G  PG G FELG DE+AAAGRLS GDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMA+ELTNLQD+YLHAVTR+V LQREADAYLAS K P +   XXXXXXXXXXXXXXX XXXXXXX                 ARLLEV GRLAP VGF E+  G LK+IRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP
Sbjct:  737 KVFLESVLLEIRANDWQRAAAEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDLFLPKARAIADAREKXXXXXXXXXXXXXXXXXXXPLLLSSEAVSPA------------RVERRKGIEGMPTPVEEAPRDAVKHAGGGXXXXXXXSGGPADGTRTAGPEGCDGVDAVAATAVAVAAVDGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDRSWLLPPQVWAAIDRGDFATTLHPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTQGGDVRGSVDDXXXXXXXXXXAASPPCANPSSWTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXVGADASSAPGDGIVGGVPG-GWFELGEDEVAAAGRLSPGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMAEELTNLQDVYLHAVTRHVLLQREADAYLASWKHPEEETEXXXXXXXXXXXXXXXXXXXXXXX-----------------ARLLEVGGRLAPPVGFGEEGGGGLKNIRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1365
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.230e-35
Identity = 79/128 (61.72%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLNGLFLPRARAI 384
            +VFLESVLLE+RA +W RA  +A+ AL VH G GRLWA+LVQL+       Q   L+QA  EVPKSGEVWCEGARIHL+P+S  FDL+ A +YL FA+QFTPQYGDSF+E LRL L+  +  P AR+I
Sbjct: 1374 KVFLESVLLEMRAGEWARAIDQARSALSVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSI 1501
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A7S1KQ47_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KQ47_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 4.510e-35
Identity = 76/118 (64.41%), Postives = 94/118 (79.66%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLN 354
            +VFLES+LLE+RAN+ ++A  EA+EAL++H+G GRLWAVL+QLKQ +    Q    +QA  EVPKSGEVWCEGARI LNPLS  F+LD A  YL FA++FTPQYGDSF+E LRL LL+
Sbjct:  883 KVFLESILLEMRANNTRQAIKEAEEALEIHRGTGRLWAVLIQLKQCDGPDEQIKIFRQALVEVPKSGEVWCEGARIRLNPLSPKFNLDKARDYLNFAIKFTPQYGDSFIEYLRLELLS 1000
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.320e-35
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLNGLFLPRARAI 384
            +VFLESVLLE+RA +W RA  +A+ AL VH G GRLWA+LVQL+       Q   L+QA  EVPKSGEVWCEGARIHL+P+S  FDL+ A +YL FA+QFTPQYGDSF+E LRL L+  +  P AR++
Sbjct: 1024 KVFLESVLLEMRAGEWVRAIDQARSALSVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSV 1151
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: D2V945_NAEGR (Uncharacterized protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V945_NAEGR)

HSP 1 Score: 147 bits (370), Expect = 2.550e-33
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASL-KQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLL 351
            +VFLES+LLE+RA D  +A  EA+EAL++H+G GRLWAVL+QLK  + D A+   + K+A  EVPKSGEVWCEGARI LNPLS  F L+ A +YL FA++FTPQYGDSF+E LRL LL
Sbjct:  800 KVFLESILLEMRAGDTDKATNEAKEALEIHRGTGRLWAVLIQLKHMKGDIAECYQVFKEALEEVPKSGEVWCEGARIALNPLSPKFSLEKAKRYLNFAIKFTPQYGDSFIEYLRLELL 917
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A7S4F2X1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2X1_CHRCT)

HSP 1 Score: 145 bits (367), Expect = 7.490e-33
Identity = 73/117 (62.39%), Postives = 89/117 (76.07%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLL 351
            +VFLESVLLE+R+ D QRA  EA +ALKVH+G GRLWAVL+QL+     + Q    +QA  EVPKSGEVWCEGARI LNP S+ F+L  A  +L FA++FTPQYGDSF+E LRL +L
Sbjct: 1224 KVFLESVLLELRSQDMQRALKEAHQALKVHRGTGRLWAVLIQLEHAHGVRRQLGVFQQALLEVPKSGEVWCEGARICLNPFSECFNLKAAHNFLDFAIEFTPQYGDSFIEYLRLQML 1340
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BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A7S1CM51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM51_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.400e-32
Identity = 70/117 (59.83%), Postives = 86/117 (73.50%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLL 351
            +VFLE+VLLE RA     A  +A  AL+VH G GRLWAVLVQL++ + D AQ    + A  +VPKSGEVWCEGARI L+P S+ FDL +A  +L FAVQFTPQYGDSF+E +R+ LL
Sbjct:   69 KVFLEAVLLERRAGRRDAAIAQATRALEVHSGTGRLWAVLVQLRRADGDDAQLKVFRHALMQVPKSGEVWCEGARILLHPKSRHFDLTSARSFLDFAVQFTPQYGDSFIELVRVQLL 185
[Close]
BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.570e-32
Identity = 69/117 (58.97%), Postives = 87/117 (74.36%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLL 351
            +VFLESV+LE+R  +   A  EA+ AL++H G GRLWA+LVQL        Q+   ++A  +VPKSGEVWCEGAR+HL+PLS  FDL+TA +YL FA+QFTPQYGDSF+E LR  LL
Sbjct:  794 KVFLESVMLEVRCGNRDGALKEAKSALEIHSGTGRLWAILVQLTHAHGPDQQRLVFREALKQVPKSGEVWCEGARVHLHPLSPHFDLETASRYLEFAIQFTPQYGDSFVEALRFHLL 910
[Close]
BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.390e-32
Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 1 
Query:    1 QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLK-QRESDQAQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQFTPQYGDSFMECLRLGLLNGLFLPRARAIADARES 402
            +V+LESVL+E+R  +  RA   A+ AL++H G GRLWA LVQL+   E+D+ Q A+LK+A   VPKSGEVWCEG R++LNP ++ FDLD A ++L FA +FTPQYGDSF+E LRL LL    LP A ++ DA ++
Sbjct:  448 KVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEETDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLRLELLEKWLLPVAASMWDAMQT 582
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig921.18231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI1.320e-13756.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEQ7_9PHAE1.360e-13456.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D155_9STRA3.230e-3561.72Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1KQ47_9EUKA4.510e-3564.41Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
W7TFT0_9STRA5.320e-3560.94Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
D2V945_NAEGR2.550e-3363.56Uncharacterized protein n=1 Tax=Naegleria gruberi ... [more]
A0A7S4F2X1_CHRCT7.490e-3362.39Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1CM51_9STRA2.400e-3259.83Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6S8EA78_9STRA3.570e-3258.97Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S1VNZ6_9STRA8.390e-3254.81Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig921contigL-elsbetiae_contig921:25823..30990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.4
Seed ortholog evalue6.5e-121
Seed eggNOG ortholog2880.D8LN71
Hectar predicted targeting categoryother localisation
EggNOG OGs28JG8@1,2QRVD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-05_003750.1
Exons6
Model size1773
Cds size1773
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig921.18231.1prot_L-elsbetiae_contig921.18231.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig921 25823..30990 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816994.3290873-CDS-L-elsbetiae_contig921:25822..259401622816994.3290873-CDS-L-elsbetiae_contig921:25822..25940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 25823..25940 -
1691683968.5844405-CDS-L-elsbetiae_contig921:25822..259401691683968.5844405-CDS-L-elsbetiae_contig921:25822..25940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 25823..25940 -
1622816994.3414068-CDS-L-elsbetiae_contig921:26475..266091622816994.3414068-CDS-L-elsbetiae_contig921:26475..26609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 26476..26609 -
1691683968.5987499-CDS-L-elsbetiae_contig921:26475..266091691683968.5987499-CDS-L-elsbetiae_contig921:26475..26609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 26476..26609 -
1622816994.3522768-CDS-L-elsbetiae_contig921:26678..268951622816994.3522768-CDS-L-elsbetiae_contig921:26678..26895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 26679..26895 -
1691683968.6078284-CDS-L-elsbetiae_contig921:26678..268951691683968.6078284-CDS-L-elsbetiae_contig921:26678..26895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 26679..26895 -
1622816994.3631437-CDS-L-elsbetiae_contig921:27648..286141622816994.3631437-CDS-L-elsbetiae_contig921:27648..28614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 27649..28614 -
1691683968.615863-CDS-L-elsbetiae_contig921:27648..286141691683968.615863-CDS-L-elsbetiae_contig921:27648..28614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 27649..28614 -
1622816994.374521-CDS-L-elsbetiae_contig921:29386..295401622816994.374521-CDS-L-elsbetiae_contig921:29386..29540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 29387..29540 -
1691683968.6239655-CDS-L-elsbetiae_contig921:29386..295401691683968.6239655-CDS-L-elsbetiae_contig921:29386..29540Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 29387..29540 -
1622816994.3856792-CDS-L-elsbetiae_contig921:30806..309901622816994.3856792-CDS-L-elsbetiae_contig921:30806..30990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 30807..30990 -
1691683968.6323087-CDS-L-elsbetiae_contig921:30806..309901691683968.6323087-CDS-L-elsbetiae_contig921:30806..30990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig921 30807..30990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig921.18231.1

>prot_L-elsbetiae_contig921.18231.1 ID=prot_L-elsbetiae_contig921.18231.1|Name=mRNA_L-elsbetiae_contig921.18231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=591bp
QVFLESVLLEIRANDWQRAAYEAQEALKVHKGAGRLWAVLVQLKQRESDQ
AQQASLKQASWEVPKSGEVWCEGARIHLNPLSKAFDLDTAGKYLGFAVQF
TPQYGDSFMECLRLGLLNGLFLPRARAIADARESGRHSGTAAAANPVSPS
TAAVAAAVPGSGAERGGGERPPGEAKRDDDDAAVSGTRQEQEEGERETTP
GRAGGDDDDGSGGGGGGGGGGGGGGGSIGGSIGVTAVTAGGGEGAGFSSL
GGDGDDDAPLLQSPPVLSSGAGPAEAGAGAAAAAGRACLLPPDVWAAIDS
GELAPGGTLPPPPLPLPRPRSSSPAPPAGPAGIAAAAAAAAAAGGGGVAT
TAAATDAEHGVVADVSRPGGKADGSRPGRGRFELGRDEMAAAGRLSHGDF
LRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMADELT
NLQDIYLHAVTRYVRLQREADAYLASSKPPGDHDHDAAGDASGSGSGSGS
RGEGGRGGGGRKRRGGKREGEGDRRARLLEVAGRLAPAVGFEDSEGSLKD
IRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP*
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mRNA from alignment at L-elsbetiae_contig921:25823..30990-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig921.18231.1 ID=mRNA_L-elsbetiae_contig921.18231.1|Name=mRNA_L-elsbetiae_contig921.18231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5168bp|location=Sequence derived from alignment at L-elsbetiae_contig921:25823..30990- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGTTCCTCGAGAGCGTCCTCCTCGAGATCAGGGCCAACGACTGGCA
GCGCGCGGCGTACGAGGCGCAGGAGGCGCTCAAGGTGCACAAGGGTGCCG
GGAGGCTGTGGGCGGTGCTGGTGCAGCTCAAGCAGCGGGAGAGCGACCAG
GCGCAGCAGGCGTCGCTCAAGCAGGCAAGCTGGGGTTTTTGATCACTGTT
GTCTATGCATCGACATATGTTTTGTAGGTGCTGACTACTACTACTACTAC
TACTACTACTACTGTGCTACTTTTTTTTTTTCTTCTTCTTCCATTATTGG
CACATTCGCCGGCTGCCCCGCTGGCCCCCATCCTCCACTACGACTAGCTA
GACGACAAAACCGGGGTCACACAGGAGGGAGGGGGTGGGCCCACTCTTGC
GGTGCCTGCCTGTTCTGTTTTTATCGCGAGCAGGGTTCATATAGCTCACC
ACCCTCGTCATCAACAAAGTCGGTCGAAGTATAGTTTACTAACAAAGTCG
GTTTCAATTTTCCAGGAACGAATGCGAGAAAAAAAAGTCGCTTCGCCGGG
GCTCGAAGCCATGACCTGGGTCTTAGGTTTGCGGGGGGACACCAACTAGA
CCACCGGGGGGCGACTACTCCTGTATGCATGCCACATACATACACAGTTC
GGCAACAAAGAGTTGTGGCGCGCGCAGGTTTGCGGCGGACGTTGCTTCGG
GCCTGTGGTCGGTGTTGATGTTGATGTTGATGTTGCTCCTTTCTATTCTA
GGGATTTTGCGATTGGGGTCGGTTTTTGCAGCCCAGCCTGTCTGCACCTG
GGTTGTTTCTGCCTCTGTTGTGTTTTTTCGGTGCAGCTACATTCATGCAT
ATTTATTTAGCGATGAACGATGAACAGGCCTTTGCTTGCCCCCCACCCAG
CAAGTGTTTTTTTCAAAGCACGCAGATATTCAGAAGTAGGGCTGGATGGA
CGTCGAGGCGGCAGAAGAGCCCGAAGTATATAATGTCATCTCGTCTTTGA
AAATAAATCAGAGAATCAAAGAGGGGGAAAATCCCCACACCAAAGAAACC
GTGGTCCCCTATGTATTGTAGGGGGTTAACAAACAAATCTATGCAGCAGT
AGCAGTGATGTAATATTGAATATAGGTCCGACCGAGTAGAACAACATTTA
AAACATTTATGTCGTTTTGTTTTTTTCGGTATTTAGCGTGCTCCATGCAT
CAAATGCAAATAGTGCTTTTTGGTATTTAGCGTGCTCCATGCATAAAATG
CAAAAAGTGCATGTGTGCCTTCTGCGGCCACGGGACGTATACATATCATT
GCTTGCTCCCCCCCCCCCCCCCCCTCTCCTCCCCTCTGCTAACCTGCGCG
TGATTCACGAGCACACCGACAATGTCACCCCCAATGACGAAGATACCGAT
AATGAAATGTCACACCACGCACACGCAACAAACAACACAGGCTCTGAAAG
AGGTGCCCAAGTCCGGCGAGGTGTGGTGCGAGGGCGCGCGGATACACCTC
AACCCGCTCTCGAAGGCGTTCGATCTCGACACCGCCGGGAAATACCTCGG
CTTCGCCGTACAGTTCACCCCGCAGTACGGGGACTCGTTCATGGAGTGCC
TCCGGTGAGGGCGGGGGGGAGGGGGGGGGGGGGGGGGGCAGTAACAGGCA
GGAGGGGGCCCCGCTTCGCAGGAACAAAAGGGGGGGGGCACCGCCCCCGT
TCGCAAACACAACCACCNNNNNNNNNNCTCGCCCCCGCGGGGAAACCCCT
CGGCTTCGCCGCCCAGCCCCCCCCGGGGTGGGGGGGCTCGTGCGGGGGGG
CCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGCGCAGTAACAGGCAG
GAGGGTGCCCCGCTTCGCAGGAACTAGAGGGGTGTGTCACCGCCCCCTTT
CGCAATCACGACATCCTATGTACGGGTATCAAACGGCGTAAAGCTCTCGG
TTGTTTTGTTTTTTTTAAGTAATTTTATGTATGTACGTACATACAAGTAT
GAAGATGGCTTTTTCGTTTTTCGTGTGTTTCTTCGTGTTTTTTTTTTTTT
TTCCGAGCTGGGTGCTTGCACGCGACACGCGGGCGTTGTTTCGCTGCGGC
TGGCTTTCCAGACGCCGTCGTGGGGTGCTGTTTGTTCGTCACATGGTTCG
CCTCGAAAGGGCGTTTTTGGCTTTTTTTCAAAGCCATGCGTGATTATTGT
CGTCTCTCTCCCTCCAAGATGACTGGCTCTAGTCCCCCGGTCACGAAGTT
GAACGTCTGTTTCTCTTTATTTTGTCTTCGTCTCTTTTTCTCAATTTATC
TCGTTTGTCTCTTCTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTGTCTGTCCCAGGCTGGGGCTGCTGAACGGCCTCTT
CCTGCCGAGAGCTAGAGCGATCGCCGACGCAAGAGAGAGCGGCCGGCATT
CCGGCACCGCTGCCGCCGCCAACCCTGTGTCTCCTTCGACGGCAGCGGTA
GCGGCAGCGGTGCCCGGGAGTGGAGCGGAGCGAGGAGGAGGAGAAAGGCC
ACCCGGCGAGGCAAAGCGAGACGACGACGATGCAGCCGTCTCTGGGACAC
GGCAAGAGCAGGAGGAGGGAGAGAGGGAGACGACCCCGGGGCGTGCCGGC
GGTGATGATGATGATGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTGGTGGTTCTATTGGTGGTTCTATTGGTGTCACTGCCGTCA
CCGCTGGCGGCGGCGAGGGGGCGGGCTTCTCTTCGCTGGGTGGCGACGGT
GACGATGACGCGCCGCTGCTTCAGTCGCCGCCGGTGCTGTCGTCGGGGGC
AGGCCCTGCAGAGGCGGGGGCGGGGGCGGCGGCGGCGGCGGGCAGAGCGT
GCCTGCTGCCGCCCGACGTGTGGGCGGCTATCGATAGCGGCGAGCTCGCC
CCTGGTGGAACCCTGCCGCCGCCGCCACTGCCGTTGCCCCGCCCGCGGTC
GTCTTCTCCTGCCCCCCCGGCCGGGCCTGCAGGCATTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCCGGCGGCGGCGGCGTTGCGACGACCGCGGCGGCG
ACCGACGCCGAACACGGTGTCGTTGCCGACGTTTCCCGCCCCGGGGGTAA
GGCCGACGGGTCGCGGCCTGGCCGCGGTCGTTTCGAGCTCGGGCGGGACG
AGATGGCGGCGGCGGGGCGGCTGTCGCACGGCGACTTTTTGAGGGCGGAG
GTGGAAGGGTTGGTGCTGAGGTGTGTCAACGCGGACCCCAACTACGGTTC
CATGTGGTTCCACTGCAGGCACCGGCCTTCGGACACGGCGAAGTGAGTGC
AGCTTGTTTGTCTGCTGCTGCTGTTGTTGTTGTTGGTGGTGTTGTTTTTG
TTATTGCTGCCTCTTTTTGATGCGTGCTCTCTCTCTCTCTCTCTCTCTCT
CTGTCTCTCTCTCTCGACGGGTGTGTGTAGGTTGCGGTGTATGCGAGACT
CGCGTGTCGTCTGTCCTGGTCTAATCGTGTCTGGTGTACTATTGTTTGAT
GTTGATGTTTCTTGGCAGAGAGGTGTAGGCGGCCCCGGGGGTGCTTGCGA
CCATACCACCACCAGCTCCACGTGCGAAAGCCCCCCCCCCCGCCTCCCTT
CTTTGGCGCTGCTACTGCTGTTTGTAGCTGTTTTATTCGAATCGTGCCTT
CCACGAGGCATGGCTCGTTCGCTTCCTGCCCCTGGTGACTACTTTCCGGT
ACTTCAAAAGAGCTATTTTACCAAACAGCAGTTGACCTCACAGGCGGAAA
GTTGGCCTATGGTATAGCTATGTACTCCGGGCCGCCGCGCGAAAAACCTT
GGCGGCCCTGTCCGCTAACATTCGCAACACACACACACACACACACACAC
ACACACACACACACACACATCCCCGGCCTGCTGCTTCATCCGCCCACCCA
CTGTGGACACTGTCTACCGCGGTGAGCGCGGTCGATGCTAACTTAAGAAA
ACACACGCACACGCACACGCACTCGCACACACACAAACACACGCGCGCAC
GTGCATGCCACACACATGATGCCCCCTATCTCTTCCCCGGGACAGGTCCA
TCCTGATGATGTCGAAGGTCATGATGGCGGACGAGCTCACCAACCTCCAA
GACATCTACCTCCACGCCGTCACCCGGTACGTCCGCCTCCAGAGAGAGGC
GGACGCCTACCTGGCCTCCTCCAAACCTCCGGGAGATCACGATCATGACG
CTGCTGGCGACGCCAGCGGCAGCGGCAGCGGCAGCGGCTCGAGGGGGGAG
GGCGGACGGGGGGTAGAAACCCCCCAGCCGCGGGGAGGAAGACATCGCGG
CCCCTCGAATGCTGGCGCCAGCAGAAGGAAGGGGGGGGGCAGAAAGCGGA
GGGGGGGCAAGAGGGAGGGGGAGGGGGACCGGAGAGCGCGGCTGCTGGAG
GTTGCCGGACGGCTTGCCCCCGCAGTCGGCTTTGAGGACTCGGAAGGGAG
CCTCAAGGACATCAGGTGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTG
GTGTTGTTGTTGTTGTTGTGTTGTTGTTTGTTGGTGTTGTTGTTGCTGCT
ACTGCTGTCGCCGTTGTATGTATGTGCTTGGTATAATATGCGCATGTGTA
TGATGGGCACATGGTATGTTCTCGCAAGTCTCAAGCCTATTTTTTAAGGG
GAAAGTAAAGGTCGGCCGTGACGTTGCGTGTGCGTGTTTCCTTTTCACAA
TACTTGAAGTTAGAGTGCCCCTCCAACGACGCAAGCACGGCCCCGTTTCC
ACGACAAGACGAAAAGGCGCTTTCTGAATCCTGCAAAGATTTAAGATTCG
GACGATCCACGGACTGCTAATTACACTACCGTATTCCAAGATCTTCTTGC
ATCCTAGGTATTTATTATACATTACCTTTCATAAACATACTTCACACATT
TTTATTTTTTTTCGTTTTTTTCTCTGCCCCTTTTCGTGGCTCGCGCGCGT
GTTTGTGTTGCGTTTTTCTTCTTTGCTCGTCTTCTCTTCTCCTCCCGCAG
GGCGGAAGACTTCGTGACCGGGCTTGCCAGTCTCAACCGCATCACGGCGC
AGATGGGCCGTCTTCGGAGCGAAGACCGACGGAAAATCTTGTTCGGCTCT
GACCAGATCGTGCCCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig921:25823..30990-

>mRNA_L-elsbetiae_contig921.18231.1 ID=mRNA_L-elsbetiae_contig921.18231.1|Name=mRNA_L-elsbetiae_contig921.18231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3546bp|location=Sequence derived from alignment at L-elsbetiae_contig921:25823..30990- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGTTCCTCGAGAGCGTCCTCCTCGAGATCAGGGCCAACGACTGGCA
GCGCGCGGCGTACGAGGCGCAGGAGGCGCTCAAGGTGCACAAGGGTGCCG
GGAGGCTGTGGGCGGTGCTGGTGCAGCTCAAGCAGCGGGAGAGCGACCAG
GCGCAGCAGGCGTCGCTCAAGCAGGCAAGCTGGGCAGGTGTTCCTCGAGA
GCGTCCTCCTCGAGATCAGGGCCAACGACTGGCAGCGCGCGGCGTACGAG
GCGCAGGAGGCGCTCAAGGTGCACAAGGGTGCCGGGAGGCTGTGGGCGGT
GCTGGTGCAGCTCAAGCAGCGGGAGAGCGACCAGGCGCAGCAGGCGTCGC
TCAAGCAGGCAAGCTGGGAGGTGCCCAAGTCCGGCGAGGTGTGGTGCGAG
GGCGCGCGGATACACCTCAACCCGCTCTCGAAGGCGTTCGATCTCGACAC
CGCCGGGAAATACCTCGGCTTCGCCGTACAGTTCACCCCGCAGTACGGGG
ACTCGTTCATGGAGTGCCTCCGAGGTGCCCAAGTCCGGCGAGGTGTGGTG
CGAGGGCGCGCGGATACACCTCAACCCGCTCTCGAAGGCGTTCGATCTCG
ACACCGCCGGGAAATACCTCGGCTTCGCCGTACAGTTCACCCCGCAGTAC
GGGGACTCGTTCATGGAGTGCCTCCGGCTGGGGCTGCTGAACGGCCTCTT
CCTGCCGAGAGCTAGAGCGATCGCCGACGCAAGAGAGAGCGGCCGGCATT
CCGGCACCGCTGCCGCCGCCAACCCTGTGTCTCCTTCGACGGCAGCGGTA
GCGGCAGCGGTGCCCGGGAGTGGAGCGGAGCGAGGAGGAGGAGAAAGGCC
ACCCGGCGAGGCAAAGCGAGACGACGACGATGCAGCCGTCTCTGGGACAC
GGCAAGAGCAGGAGGAGGGAGAGAGGGAGACGACCCCGGGGCGTGCCGGC
GGTGATGATGATGATGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTGGTGGTTCTATTGGTGGTTCTATTGGTGTCACTGCCGTCA
CCGCTGGCGGCGGCGAGGGGGCGGGCTTCTCTTCGCTGGGTGGCGACGGT
GACGATGACGCGCCGCTGCTTCAGTCGCCGCCGGTGCTGTCGTCGGGGGC
AGGCCCTGCAGAGGCGGGGGCGGGGGCGGCGGCGGCGGCGGGCAGAGCGT
GCCTGCTGCCGCCCGACGTGTGGGCGGCTATCGATAGCGGCGAGCTCGCC
CCTGGTGGAACCCTGCCGCCGCCGCCACTGCCGTTGCCCCGCCCGCGGTC
GTCTTCTCCTGCCCCCCCGGCCGGGCCTGCAGGCATTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCCGGCGGCGGCGGCGTTGCGACGACCGCGGCGGCG
ACCGACGCCGAACACGGTGTCGTTGCCGACGTTTCCCGCCCCGGGGGTAA
GGCCGACGGGTCGCGGCCTGGCCGCGGTCGTTTCGAGCTCGGGCGGGACG
AGATGGCGGCGGCGGGGCGGCTGTCGCACGGCGACTTTTTGAGGGCGGAG
GTGGAAGGGTTGGTGCTGAGGTGTGTCAACGCGGACCCCAACTACGGTTC
CATGTGGTTCCACTGCAGGCACCGGCCTTCGGACACGGCGAAGCTGGGGC
TGCTGAACGGCCTCTTCCTGCCGAGAGCTAGAGCGATCGCCGACGCAAGA
GAGAGCGGCCGGCATTCCGGCACCGCTGCCGCCGCCAACCCTGTGTCTCC
TTCGACGGCAGCGGTAGCGGCAGCGGTGCCCGGGAGTGGAGCGGAGCGAG
GAGGAGGAGAAAGGCCACCCGGCGAGGCAAAGCGAGACGACGACGATGCA
GCCGTCTCTGGGACACGGCAAGAGCAGGAGGAGGGAGAGAGGGAGACGAC
CCCGGGGCGTGCCGGCGGTGATGATGATGATGGTAGTGGTGGTGGTGGTG
GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTCTATTGGTGGTTCTATT
GGTGTCACTGCCGTCACCGCTGGCGGCGGCGAGGGGGCGGGCTTCTCTTC
GCTGGGTGGCGACGGTGACGATGACGCGCCGCTGCTTCAGTCGCCGCCGG
TGCTGTCGTCGGGGGCAGGCCCTGCAGAGGCGGGGGCGGGGGCGGCGGCG
GCGGCGGGCAGAGCGTGCCTGCTGCCGCCCGACGTGTGGGCGGCTATCGA
TAGCGGCGAGCTCGCCCCTGGTGGAACCCTGCCGCCGCCGCCACTGCCGT
TGCCCCGCCCGCGGTCGTCTTCTCCTGCCCCCCCGGCCGGGCCTGCAGGC
ATTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGGCGGCGGCGGCGTTGC
GACGACCGCGGCGGCGACCGACGCCGAACACGGTGTCGTTGCCGACGTTT
CCCGCCCCGGGGGTAAGGCCGACGGGTCGCGGCCTGGCCGCGGTCGTTTC
GAGCTCGGGCGGGACGAGATGGCGGCGGCGGGGCGGCTGTCGCACGGCGA
CTTTTTGAGGGCGGAGGTGGAAGGGTTGGTGCTGAGGTGTGTCAACGCGG
ACCCCAACTACGGTTCCATGTGGTTCCACTGCAGGCACCGGCCTTCGGAC
ACGGCGAAGTCCATCCTGATGATGTCGAAGGTCATGATGGCGGACGAGCT
CACCAACCTCCAAGACATCTACCTCCACGCCGTCACCCGGTACGTCCGCC
TCCAGAGAGAGGCGGACGCCTACCTGGCCTCCTCCAAACCTCCGGGAGAT
CACGATCATGACGCTGCTGGCGACGCCAGCGGCAGCGGCAGCGGCAGCGG
CTCGAGGGGGGAGGGCGGACGGGGGGTCCATCCTGATGATGTCGAAGGTC
ATGATGGCGGACGAGCTCACCAACCTCCAAGACATCTACCTCCACGCCGT
CACCCGGTACGTCCGCCTCCAGAGAGAGGCGGACGCCTACCTGGCCTCCT
CCAAACCTCCGGGAGATCACGATCATGACGCTGCTGGCGACGCCAGCGGC
AGCGGCAGCGGCAGCGGCTCGAGGGGGGAGGGCGGACGGGGGGGGGGGGG
CAGAAAGCGGAGGGGGGGCAAGAGGGAGGGGGAGGGGGACCGGAGAGCGC
GGCTGCTGGAGGTTGCCGGACGGCTTGCCCCCGCAGTCGGCTTTGAGGAC
TCGGAAGGGAGCCTCAAGGACATCAGGGGGGGGGCAGAAAGCGGAGGGGG
GGCAAGAGGGAGGGGGAGGGGGACCGGAGAGCGCGGCTGCTGGAGGTTGC
CGGACGGCTTGCCCCCGCAGTCGGCTTTGAGGACTCGGAAGGGAGCCTCA
AGGACATCAGGGCGGAAGACTTCGTGACCGGGCTTGCCAGTCTCAACCGC
ATCACGGCGCAGATGGGCCGTCTTCGGAGCGAAGACCGACGGAAAATCTT
GTTCGGCTCTGACCAGATCGTGCCCTGAGGCGGAAGACTTCGTGACCGGG
CTTGCCAGTCTCAACCGCATCACGGCGCAGATGGGCCGTCTTCGGAGCGA
AGACCGACGGAAAATCTTGTTCGGCTCTGACCAGATCGTGCCCTGA
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