prot_L-elsbetiae_contig9204.18229.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9204.18229.1
Unique Nameprot_L-elsbetiae_contig9204.18229.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length343
Homology
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BLAST of mRNA_L-elsbetiae_contig9204.18229.1 vs. uniprot
Match: D7FKU1_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU1_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.250e-6
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 0 
Query:  254 SSYFDSKMQECLSKNHKPSSPGAHVIRVLHVAEAYGARSWQW-----IQEQDGVGVEEPVKRSSGLPGSTPAWPPARASWMVPGRGMFVPAVLR 342
            SS + +K+Q+ L+ N+K  +P     +V+ VA+AY ARSWQW                      G+ GS PA     ASWM P RG+FVPAVLR
Sbjct:  317 SSPYAAKLQKRLTTNYKLDTPEGRCRQVMLVAKAYNARSWQWPASALATSAXXXXXXXXXXAGKGVVGSKPAR--NAASWMRPRRGVFVPAVLR 408
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9204.18229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKU1_ECTSI2.250e-640.43Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 53..68
score: 42.49
coord: 101..115
score: 40.65
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 185..214
e-value: 13.0
score: 14.7
coord: 152..181
e-value: 0.41
score: 19.7
coord: 52..81
e-value: 1.2E-4
score: 31.5
coord: 219..248
e-value: 8.3
score: 15.4
coord: 85..114
e-value: 0.013
score: 24.7
coord: 19..48
e-value: 0.015
score: 24.4
coord: 118..147
e-value: 22.0
score: 13.9
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 86..116
e-value: 0.031
score: 14.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 19..51
score: 10.232
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 52..84
score: 13.197
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 12.689
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..82
e-value: 1.2E-13
score: 51.4
coord: 158..248
e-value: 2.8E-8
score: 34.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..251
score: 61.916
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 153..271
e-value: 1.5E-17
score: 65.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 55..152
e-value: 1.5E-29
score: 105.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..54
e-value: 1.7E-15
score: 58.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..252
NoneNo IPR availablePANTHERPTHR46224FAMILY NOT NAMEDcoord: 2..169
coord: 78..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9204contigL-elsbetiae_contig9204:4011..6166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9204.18229.1mRNA_L-elsbetiae_contig9204.18229.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9204 4011..6166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9204.18229.1 ID=prot_L-elsbetiae_contig9204.18229.1|Name=mRNA_L-elsbetiae_contig9204.18229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp
RIVRVLIKAGANVNGRQSTGHTPLHCCAMEGQECMMKDLLRAGANPTLAS
VDGQTPLHTAAQWGHAREVKTLIAAGAKINARCTKGYTPLRLAAWHGTAA
AVEALLDAGADVGVKDYMNYNILSGAFQNKYDEIIYLLLDAGADPDKTDP
EGDNPPVMLAVNNNNSQLVRSIIAAGANPNIATPNAITPVALAAQMGRTR
CLAVLLSSGASPHHVVRQSVPTPLQWAIIGLNPTCLAFLLTAGANPEERH
KCSSSYFDSKMQECLSKNHKPSSPGAHVIRVLHVAEAYGARSWQWIQEQD
GVGVEEPVKRSSGLPGSTPAWPPARASWMVPGRGMFVPAVLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf