mRNA_L-elsbetiae_contig920.18227.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 3.340e-168 Identity = 236/286 (82.52%), Postives = 259/286 (90.56%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEASLPQQVRNVCDLKTVSDSPQV 858 RERKSSLSTKFRVRGIPALVI+D+ GSVIT DGR +VGDDPEG+DFPWRPKPLSELIGTEF+TK G++AG E +RGKTLA+YFSAHWCPPCRAFTPRLV+TY++LKKRAG DDVEF+FVSSDKDQAQFD+YF EMPWAAIPF D RRRALATR GVRGIPTL TI DGV+INQ AK +A ADAKGLEFPWWPK VEDL+V+SQSNGFHVQE+P+LIVFMEA DDVDQ+EVE+ALLPIA AEAE AKA GG P LIFFTVKSEASLP QVRNVCDLKTV DSPQ+ Sbjct: 94 RERKSSLSTKFRVRGIPALVIMDQDGSVITPDGREVVGDDPEGKDFPWRPKPLSELIGTEFVTKPGTLAGEEVVRGKTLALYFSAHWCPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAKGLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEVEEALLPIATAEAEAAKANGGQPVLIFFTVKSEASLPTQVRNVCDLKTVPDSPQM 379
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: D7FK65_ECTSI (Nucleoredoxin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK65_ECTSI) HSP 1 Score: 330 bits (847), Expect = 7.920e-112 Identity = 165/199 (82.91%), Postives = 178/199 (89.45%), Query Frame = 1 Query: 262 CPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEASLPQQVRNVCDLKTVSDSPQV 858 CPPCRAFTPRLV+TY++LKKRAG DDVEF+FVSSDKDQAQFD+YF EMPWAAIPF D RRRALATR GVRGIPTL TI DGV+INQ AK +A ADAKGLEFPWWPK VEDL+V+SQSNGFHVQE+P+LIVFMEA DDVDQ+EVE+ALLPIA AEAE AKA GG P LIFFTVKSEASLP QVRNVCDLKTV DSPQV Sbjct: 9 CPPCRAFTPRLVQTYKDLKKRAGSDDVEFLFVSSDKDQAQFDDYFREMPWAAIPFGDVNRRRALATRLGVRGIPTLTTIDRDGVVINQTAKGAAIADAKGLEFPWWPKAVEDLSVNSQSNGFHVQEMPSLIVFMEACDDVDQKEVEEALLPIATAEAEAAKANGGQPVLIFFTVKSEASLPTQVRNVCDLKTVPDSPQV 207
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A6V1NWZ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWZ1_HETAK) HSP 1 Score: 261 bits (667), Expect = 9.250e-82 Identity = 138/277 (49.82%), Postives = 179/277 (64.62%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEASLPQQVRNVCDL 831 R+RK+ LS+KF+VRGIP+LVILDE GS+IT +GR+ V D EG DFPWRPKP+ EL+G EF K G+V G I GKTL +YFSAHWC PCR FTP L K Y +LK++ G ++ E IFVS DK +QF+EY+ EMPW AIP+ D R L R V GIP L + DG ++N A+ AD FPW P+P+EDL V ++ G + E P+L++FME DD+ Q E A L +A+ A A+ G PAL+FF + +P QVR + L Sbjct: 93 RDRKTHLSSKFKVRGIPSLVILDEDGSLITLNGRASVQSDREGEDFPWRPKPIPELLGDEFKGKEGTV-GRSVIEGKTLGIYFSAHWCGPCRGFTPTLAKVYNKLKEK-GQNNFEVIFVSGDKSDSQFEEYYGEMPWLAIPYGDK-RIDQLNQRFEVNGIPHLVILNPDGTVLNASARGKIDADENAENFPWAPEPMEDLGVTAECMGSDINEKPSLVLFMEGVDDLQQDEAWAAGLAVAREFA--ARGGGDGPALLFFGARGGGRIPPQVRRMTGL 364
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A7S4G189_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G189_9EUGL) HSP 1 Score: 259 bits (661), Expect = 4.120e-80 Identity = 131/274 (47.81%), Postives = 176/274 (64.23%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEASLPQQVRNV 822 RERK +LSTKF+V+GIP VIL GS+IT DGRS V DP+G DFPW+PKP ELIG F+ + + A+ GK L +YFSAHWCPPCR FTP+L + Y+ +K+ D E +F SSD+D+ FDEYF+EMPW A+P++D R+ AL+T CGV GIPTLA I DG +I + D +G +FPW+PKP++DLA H Q V + P+L+V M+ AD + + AL PIA+ E AKA G L F + A + ++R++ Sbjct: 103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAFVGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPEGKQFPWYPKPIKDLA-HEQDG---VDDCPSLVVLMDGADQETRDAITAALEPIAKEYQEKAKASGEDEVLFFTGGPAAAGIASRLRSL 370
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A7S4G1A5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G1A5_9EUGL) HSP 1 Score: 255 bits (652), Expect = 5.350e-79 Identity = 129/255 (50.59%), Postives = 168/255 (65.88%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPA 765 RERK +LSTKF+V+GIP VIL GS+IT DGRS V DP+G DFPW+PKP ELIG F+ + + A+ GK L +YFSAHWCPPCR FTP+L + Y+ +K+ D E +F SSD+D+ FDEYF+EMPW A+P++D R+ AL+T CGV GIPTLA I DG +I + D +G +FPW+PKP++DLA H Q V + P+L+V M+ AD + + AL PIA+ E AKA G PA Sbjct: 103 RERKEALSTKFKVQGIPTFVILGTDGSIITKDGRSAVTADPKGEDFPWKPKPFHELIGDAFVGQGKAPLDQSAVEGKVLGLYFSAHWCPPCRGFTPKLAEWYKAVKETLP--DFEIVFASSDRDEGSFDEYFAEMPWIALPYADRKRKEALSTLCGVEGIPTLAIIDKDGRIITTNGRGIPEMDPEGKQFPWYPKPIKDLA-HEQDG---VDDCPSLVVLMDGADQETRDAITAALEPIAKEYQEKAKASGVWPA 351
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A7S2UY08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY08_9STRA) HSP 1 Score: 252 bits (644), Expect = 2.650e-78 Identity = 127/279 (45.52%), Postives = 183/279 (65.59%), Query Frame = 1 Query: 10 KSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEASLPQQVRNVCDLKTVSD 846 + +L KF+ +GIP VILD +G ++T +GR V ++P FPW P P++EL+G+EF+ G+ + + GKTL +YFSAHWCPPCR FTP+LV Y +K + DD E IFVS D++Q+QFDEYF EMPW A+P++ A+R + LA GVRGIP+ + AD +IN+ A+ D +G FPW P+P+EDL+V + G+ + +VPALIVFME ADD+DQQ + L IA AE K +G L+FFT K+ + Q++++C ++ +D Sbjct: 96 RRALGRKFKCQGIPFFVILDSNGEMVTDNGREGVMEEPNS--FPWHPVPITELLGSEFIGAGGTTTTPD-LSGKTLGIYFSAHWCPPCRGFTPKLVDFYNNMKSKR--DDFEIIFVSRDREQSQFDEYFGEMPWLAVPYTSASRDK-LAKSMGVRGIPSFQILDADRKVINKDARMRVENDLQGEGFPWPPQPLEDLSVDTTCMGYDINDVPALIVFMEGADDMDQQTLTTGLNEIATKYAEAGKEKGKEQTLLFFTAKASNRITSQIQSLCGIQPGAD 368
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A6T2CYP1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2CYP1_9EUGL) HSP 1 Score: 248 bits (632), Expect = 1.680e-76 Identity = 122/266 (45.86%), Postives = 171/266 (64.29%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTVKSEAS 798 RERK++LS KF+V GIP+ VILD+ GS IT DGRS V +DP G +FPW+PKP ELIG F+ ++ + AI GK L +YFSAHWCPPCR FTP+L + Y+ +K+ + E +F SSD+DQ+ FD+YF+EMPW A+P+ D R+ L+ CGV GIP+ I DG +I + D +G +FPW+PKPV++LA + + + P+ +V M+ AD Q V+ A+ PIA+ + AKA G +FFT +EA+ Sbjct: 93 RERKAALSKKFKVDGIPSFVILDQDGSTITKDGRSAVSEDPTGEEFPWKPKPFHELIGESFIGQNKAPLDKSAIDGKVLGLYFSAHWCPPCRGFTPKLAEWYKSVKETLP--EFEIVFASSDRDQSSFDDYFAEMPWIALPYEDRKRKETLSNLCGVSGIPSFVIIDKDGSIITTNGRGIPEMDPEGKQFPWYPKPVKNLAYDTDG----INDTPSFVVLMDGADKETQDAVQAAVEPIAKEYQQKAKA-SGEDEFLFFTADAEAA 351
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A813H0J6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H0J6_POLGL) HSP 1 Score: 221 bits (563), Expect = 1.680e-65 Identity = 118/279 (42.29%), Postives = 169/279 (60.57%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELI-GTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGP-PALIFFTVKSEASLPQQVRNVCDL 831 RERK +LS K++V+GIP +VILD +G VIT DGR+ + DP+G +FPW+PK L +++ G + + K G V + GK +YFSAHWC PCR FTP+L + YE+ K G +E +FVSSD+DQ FD Y+ E PW A+ FS+ + L+T GV+GIP L + DG +I ++ + + + D +G EFPW+PKPV DLA + + E I F EAAD Q E+A+ +A+ E AKA G P ++F K+ + Q+R + L Sbjct: 96 RERKETLSKKYKVQGIPTVVILDGTGQVITKDGRTAISGDPKGNNFPWKPKSLKDILAGAKIIGKDGPVDA-STLHGKAFGLYFSAHWCGPCRGFTPKLAEWYEKDLKSKG---LEIVFVSSDRDQEAFDGYYGEQPWLALDFSNRAEKEQLSTLLGVQGIPNLVIVDKDGSIITKEGRGAVSNDPEGAEFPWYPKPVLDLA----AGPGPLNEATCCIAFCEAADATAQIAAEEAMASLAKKYVEEAKAAGEEDPKVVFMIAKAGGGICGQLRALMSL 366
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A813KWX7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KWX7_POLGL) HSP 1 Score: 219 bits (557), Expect = 1.280e-64 Identity = 115/278 (41.37%), Postives = 164/278 (58.99%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGP-PALIFFTVKSEASLPQQVRNVCDL 831 RERK LS K++V+GIP ++ILD G VIT DG+S + DP+G +FPW+PK L E++ + A+ GK +YFSAHWCPPCR FTP+L + Y + K G +E +FVSSDK Q FDEY+ E PW A+ +S+ + + L+ GV+GIP+ + DG +I + + + D +G EFPW+PKPV DLA Q +G + E I F EAAD Q+ E+A+ P+A+ E A A G P + F K+ + + Q+R + L Sbjct: 95 RERKEKLSKKYKVQGIPTVIILDAEGQVITKDGQSAIHRDPKGVNFPWKPKSLKEILAAAKIIGKDGPVDASALHGKVFGLYFSAHWCPPCRGFTPKLAEWYAKSLKSKG---MEVVFVSSDKTQEAFDEYYGEQPWLALDYSNRSEKEELSNLFGVQGIPSFVIVDKDGSVITKDGTAAVSNDPEGAEFPWYPKPVLDLA---QGHG-PLNEAACCIAFCEAADATAQKAAEEAMAPVAKKYIEEATAAGEEDPKVTFMIAKTSSGVCGQLRKLMAL 365
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Match: A0A7S1IHV4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHV4_9EUGL) HSP 1 Score: 218 bits (554), Expect = 3.740e-64 Identity = 113/277 (40.79%), Postives = 157/277 (56.68%), Query Frame = 1 Query: 1 RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPKPLSELIGTEFLTKSGSVAGLEAIRGKTLAVYFSAHWCPPCRAFTPRLVKTYEELKKRAGGDDVEFIFVSSDKDQAQFDEYFSEMPWAAIPFSDATRRRALATRCGVRGIPTLATIGADGVMINQKAKESATADAKGLEFPWWPKPVEDLAVHSQSNGFHVQEVPALIVFMEAADDVDQQEVEDALLPIAQAEAEIAKAEGGPPALIFFTV-KSEASLPQQVRNVCD 828 R +K +LS KF+V GIP VILD G VIT DGR V DP G+DFPWRP +E +G F+ + G G A++ K L +YFSAHWCPPCR FTP+L + Y+ +K + D E +FVSSD+DQ FDEYF+EMPW A+PF + + +L++ V GIP+ + DG I + D +G FPW P V+D+A + V L+ ME AD V A+ P+A+ AKA G P +F+ S + ++R++C+ Sbjct: 100 RAKKDALSKKFKVSGIPTFVILDADGKVITADGRGAVSADPTGQDFPWRPPTFAEALGDSFVGQGGEKLGKSAVQDKVLGLYFSAHWCPPCRGFTPKLAEWYKTVKPKLP--DFELVFVSSDRDQGAFDEYFAEMPWLALPFENRKAKESLSSMFEVEGIPSFVIVDKDGSTITTSGRGIPQMDPEGTNFPWHPPAVKDVAGDTAGLNSSV----CLLALMEGADAAAVDAVRAAMKPLAEEYNAKAKASGDDPEFLFYVGGPSSKGICSRIRSLCN 370 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig920.18227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig920.18227.1 >prot_L-elsbetiae_contig920.18227.1 ID=prot_L-elsbetiae_contig920.18227.1|Name=mRNA_L-elsbetiae_contig920.18227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp RERKSSLSTKFRVRGIPALVILDESGSVITTDGRSLVGDDPEGRDFPWRPback to top mRNA from alignment at L-elsbetiae_contig920:28286..30870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig920.18227.1 ID=mRNA_L-elsbetiae_contig920.18227.1|Name=mRNA_L-elsbetiae_contig920.18227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2585bp|location=Sequence derived from alignment at L-elsbetiae_contig920:28286..30870- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig920:28286..30870- >mRNA_L-elsbetiae_contig920.18227.1 ID=mRNA_L-elsbetiae_contig920.18227.1|Name=mRNA_L-elsbetiae_contig920.18227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1716bp|location=Sequence derived from alignment at L-elsbetiae_contig920:28286..30870- (Laminarionema elsbetiae ELsaHSoW15)back to top |