mRNA_L-elsbetiae_contig920.18226.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig920.18226.1
Unique NamemRNA_L-elsbetiae_contig920.18226.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 5.150e-50
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 3 
Query:  456 MVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGALSYERKMKMQAMFMEDDVVETSDVDDVRYNMRRALRANQTEEELLALTADARKRAEEEADDGW 761
            MV+Q++IYGGLVA AGLA GAGMVALTE+AGVRSEERGALSYERKMKMQAMFMEDDVVE +DVDDVRYNMR+ALRANQTEEELLALTADARKRAEEEADDGW
Sbjct:    1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A7S1ZEU0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEU0_TRICV)

HSP 1 Score: 70.9 bits (172), Expect = 8.150e-11
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 3 
Query:  426 LRRQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGA-LSYERKMKMQAMFMED-DVVETSDVDDVRYNMRRALR-ANQTEEELLALTADARKRAEEEADDGW 761
            ++R+ S+SL+MVDQNVI G  +A  GL AG G+VA  E  G RS+ERG  +S     K+    MED +V   SD+  +   +  AL+ +   + E+  ++ + ++R +EEADDGW
Sbjct:   45 VQRKSSTSLSMVDQNVIQGAAIAVGGLVAGIGLVAFAEGMGERSKERGGGVSEGMATKLAGSLMEDVEVSSVSDLGSLTSQLEAALKESGGADGEVFEMSEEEKQRIKEEADDGW 159
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO)

HSP 1 Score: 69.7 bits (169), Expect = 1.290e-10
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 3 
Query:  420 PQLRRQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGA-LSYERKMKMQAMFMEDDVVETSDVDDV---RYNMRRALRANQTEEELLALTADARKRAEEEADDGW 761
            P L  + ++SL MVDQNV+ G  V   GLA G G+VA TE+ G R++ERG  LS     ++    +ED  VE S VDD+      +  ALR      E   ++ +A+++A E+ADDGW
Sbjct:   24 PSLSPRSTTSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLED--VEVSSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A7S1B8H5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8H5_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.560e-10
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 3 
Query:  432 RQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGALSYERKMKMQAMFMED-DVVETSDVDDVRYNMRRALR-ANQTEEELLALTADARKRAEEEADDGW 761
            R  SSSL MVD N++ GG VA A  A G G+V  TE AG R    G LS +   K+  M MED +V   +DV  +   + +AL  A   E + + L+ + +KR EEE DDGW
Sbjct:   48 RNSSSSLQMVDTNILMGGAVAVASFAFGIGLVVFTESAGERG---GGLSEDMSTKITGMLMEDVEVSSVADVTSLTDQLAKALEDAGAIEGKDVELSEEEKKRKEEEMDDGW 156
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A6U0FCW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FCW0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.060e-9
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 3 
Query:  429 RRQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGA-LSYERKMKMQAMFMED-DVVETSDVDDVRYNMRRALRANQTEE-ELLALTADARKRAEEEADDGW 761
            +R  S+SL MVDQN+IYG  +   G A G G+VA  E  G R++ERG  +S     ++    +ED +V   SD+  +   +  AL+    +E + L +T + +K+  EEADDGW
Sbjct:   65 KRSTSTSLKMVDQNIIYGAAIGIGGFAVGIGLVAFAEAQGERAKERGGGISDSMSTRIAGGLLEDVEVDSVSDLGSLTSQLEAALKETGAKEADNLEMTEEEKKKIAEEADDGW 178
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-8
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 3 
Query:  429 RRQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGALSYERKMKMQAMFMED-DVVETSDVDDVRYNMRRALRANQTEE-ELLALTADARKRAEEEADDGW 761
            +R  S+SL MVDQNVI G  +   G A G G++A TE  G R++ERG LS     ++    +ED +V   SD+  +   +  AL+   +++ + L +T + +++  ++ADDGW
Sbjct:   45 QRSSSTSLCMVDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLEDVEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A7S2W4T6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4T6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.600e-8
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3 
Query:  441 SSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERGA-LSYERKMKMQAMFMED-DVVETSDVDDVRYNMRRALRAN----QTEEELLALTADARKRAEEEADDGW 761
            SSSL M+D NVI GG +A A   AG G+V  TE  G RS+ERG  LS     ++    MED +V   SD+  +   +  AL+A+      + + L +T   ++R  EEA+DGW
Sbjct:   49 SSSLKMLDSNVIQGGAIAVASFIAGIGLVTFTENQGERSKERGGGLSDTMATQIAGKLMEDIEVSSVSDMGSLTSQLENALKASGGVDDEQAKALEMTEAEKQRIAEEAEDGW 161
[Close]
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.460e-8
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 3 
Query:  429 RRQPSSS-LNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERG--ALSYERKMKMQAMFMEDDVVETSDVDDVRYNMRRALRANQTEEELLALTADARKRAEEEADDGW 761
            RRQ SSS L M+D  VI GG  A  GLA G GM   +E+   + E+RG  A+S   + KM AMFMED+V+  + +DD    M  AL A + E    A+     ++     DDGW
Sbjct:   44 RRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTTLDDTVSRMEAALAAAKGE---AAVEEKVEEKPASSIDDGW 154
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig920.18226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LC02_ECTSI5.150e-5091.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1ZEU0_TRICV8.150e-1140.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5KBT4_FISSO1.290e-1040.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1B8H5_9STRA3.560e-1042.86Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A6U0FCW0_9STRA1.060e-937.72Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S9FQI8_9STRA1.080e-835.40Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2W4T6_9STRA1.600e-839.82Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4ECZ2_9STRA3.460e-841.23Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig920contigL-elsbetiae_contig920:21254..25114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue2.9e-42
Seed eggNOG ortholog2880.D8LC02
Hectar predicted targeting categorychloroplast
EggNOG OGs2E97Y@1,2SFM6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-20_003940.1
Exons3
Model size1583
Cds size495
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig920.18226.1prot_L-elsbetiae_contig920.18226.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig920 21523..24295 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816993.8883677-UTR-L-elsbetiae_contig920:21253..215221622816993.8883677-UTR-L-elsbetiae_contig920:21253..21522Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig920 21254..21522 +
1691683968.2878094-UTR-L-elsbetiae_contig920:21253..215221691683968.2878094-UTR-L-elsbetiae_contig920:21253..21522Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig920 21254..21522 +
1622816993.938022-UTR-L-elsbetiae_contig920:24295..251141622816993.938022-UTR-L-elsbetiae_contig920:24295..25114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig920 24296..25114 +
1691683968.3252952-UTR-L-elsbetiae_contig920:24295..251141691683968.3252952-UTR-L-elsbetiae_contig920:24295..25114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig920 24296..25114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816993.9000108-CDS-L-elsbetiae_contig920:21522..218371622816993.9000108-CDS-L-elsbetiae_contig920:21522..21837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 21523..21837 +
1691683968.2970555-CDS-L-elsbetiae_contig920:21522..218371691683968.2970555-CDS-L-elsbetiae_contig920:21522..21837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 21523..21837 +
1622816993.9099488-CDS-L-elsbetiae_contig920:23405..235101622816993.9099488-CDS-L-elsbetiae_contig920:23405..23510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 23406..23510 +
1691683968.3044353-CDS-L-elsbetiae_contig920:23405..235101691683968.3044353-CDS-L-elsbetiae_contig920:23405..23510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 23406..23510 +
1622816993.9257486-CDS-L-elsbetiae_contig920:24220..242951622816993.9257486-CDS-L-elsbetiae_contig920:24220..24295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 24221..24295 +
1691683968.313802-CDS-L-elsbetiae_contig920:24220..242951691683968.313802-CDS-L-elsbetiae_contig920:24220..24295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig920 24221..24295 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig920.18226.1

>prot_L-elsbetiae_contig920.18226.1 ID=prot_L-elsbetiae_contig920.18226.1|Name=mRNA_L-elsbetiae_contig920.18226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp
MRFAGALVFFLPVTSAFLAPTASLPRSSSAHHVSARSPFVGGVQAPSSQQ
PQLRRQPSSSLNMVDQNVIYGGLVAFAGLAAGAGMVALTEKAGVRSEERG
ALSYERKMKMQAMFMEDDVVETSDVDDVRYNMRRALRANQTEEELLALTA
DARKRAEEEADDGW*
back to top

mRNA from alignment at L-elsbetiae_contig920:21254..25114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig920.18226.1 ID=mRNA_L-elsbetiae_contig920.18226.1|Name=mRNA_L-elsbetiae_contig920.18226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3861bp|location=Sequence derived from alignment at L-elsbetiae_contig920:21254..25114+ (Laminarionema elsbetiae ELsaHSoW15)
GCCTCTGATTGTACAATAGTCATCAAGACTCCATAGGCGTCTTGACTGAA
TGCTGTTCAGACGGCAGTCTCTCTTCCCCCCTGACTGCCCACCTCCTCCC
CAAGCATTTTGTAACAGCCTCGTTGACGTCGCAACCCCTCTAACCAGTGC
TTCCCGTCTAAAAATTGCGCACCATCCTCTGTCTGTTCCCCCGCTAACGG
CGGTGTTTTGACACTCACAGCAGCGTACACAGCACCAGGAACAACTCACG
CCAACACCACAGCGACAGCATGAGATTCGCCGGGGCACTAGTGTTCTTCC
TTCCCGTCACCTCGGCCTTCCTGGCCCCCACAGCGTCCCTTCCGCGTAGC
AGCAGTGCACACCACGTCAGCGCCAGGTCACCTTTCGTCGGCGGCGTTCA
GGCACCATCATCACAGCAGCCGCAGCTGCGACGGCAACCGAGCTCGTCGT
TGAACATGGTCGACCAAAACGTAATCTACGGTGGCCTCGTGGCGTTTGCG
GGTCTCGCTGCTGGCGCGGGAATGGTTGCCCTCACGGAGAAGGCAGGGGT
GCGCTCGGAAGAGCGCGGGGCGTTGTCGTATGAGGTCAGTTCTGAGTGAG
TCTGTCTGGAAAATCGACGAGACAACAGAACAGACACAAAAACACCGCTT
TAATAGACGGACTTGCCAAGTTTGCCACATACTACTCTAGCCTATGATAG
ATATTGTATGTAGTAGGTACATACATACCGTGTGGGACACCTCGACGGAT
GCAAGCACAACATCACTATCCACACGTGTTGCACCTCCCACAAAAACGAC
TCTTTTTTTGTCCTCAAAATACGATCCCACGCAGCCCCCCCGATTGAACC
TACACACCGGAGAGCGCAGGTATATCACCAAAGCTCTTGCTGTAGTGTTG
ATCCCTAATTTCCAGGCACCTATAGGTTTCTGTACACATCACCAACAGAG
TGCCAAAGTGGCAGATCGATTGGCCAAACACAGAGCTAGACGCTCCCGTC
TAAAGTCGCTCGATCGGACGCGGCGAAGGAGCGTTTTCAGATAATTTTGG
AGGCAGACAGGCGAGCGTGCTTTGCGTGCTTTGCGTGCTTTGCGTGCTTT
GCGTGCTTTGCGTGCTTTGCCTCTCTCTTGATCAGAGAGGCGGAGTTGGC
TTGAGCGCCACAGAGGGTTGATCCCTAATTATCCAGCCCGGTGTCCCTTC
TATGCCCACATCTTTCAACGGTCGCCGAGTTTCGAGCGATTTGATGCACT
CCCAAGCTGCGGAATTGAGCTGAAAAAAGCAGCAACTTTAGTTTCTGTCT
TGCACCGGTCACTCAGCAGCTCTCCTCTTGGAAGACAAATTGCGGAATAA
CGACTCCTTGCGGGCGTAGGGAATAGGCATCCTGAGGCCTCGTGCTCTTT
TCGTTGCAACCGGTTGCGTATGTGAGGAGCATCCCCGGTCACGAAGTACA
CGGCCGCGTTGGGTTCAGAGCAACCAAAAAATAGGGAGGGGACACGAAAA
CAAAACCCCGCCCAACTCGAATGCCTCCAATGTTGAAGACAGTTTTTTTT
TTTTGTGAGAGGTGCAACACGTTTGTATCGACAATAGTAAACTCAGGAGT
ACAAGACAGAGCATAACATACTAATGAAGAACTCGGTGTTTTCAGTTCGA
GAATAAATATTGTGCGGTCGGGTGGAGACGCCCTGCATCCTCAACTTTGG
AGAAAGAGGGGAAGAGTAGTCCAAGTGTACATGGACTACCTACATATTTA
TATTTTACTTCAATGGAAATATAGCCCTGTTGTACTTTCCAAGATGACAC
TTTCAACTGGCGCTGCTGCACGTGCTCTATAATAGTTTGGTTTTATGGAG
GACAGCGGTGGTGCAAACGGCATGCGTTATTGTCTAGACTAACTGCTACA
AGAGCGGTAGGCAGAAGTTAGGCCGTTCAACGATTCTCATTTTTTGGAGA
GCGGAAGGTGCACACGTTGCCATGGACAACGACGCTTGCTGACGCTGAAC
GTTGCTGCATCAAGCTCTTAACAGCAGTCGGGCAATACCTGCATAGCTAC
CCTTGTTTATGGTGCGTGACTACCTGTTTGTGGTTGCTCATCTGGTACAT
GTACATATGGTGCGCGTTGCATGCTGTGTTTCTGCCGTCATTTCTTTCTC
AGAGGAAGATGAAGATGCAGGCAATGTTCATGGAAGACGATGTGGTGGAG
ACATCGGATGTGGACGACGTGAGGTACAACATGCGCAGGGCCCTCCGCGC
CAACCAGGTACGTGTGCTACAGCAGTGTCCATCAGGAAAAAAGTGTGTTC
CAGTTAAGGATCGAAGCCCTGCCGCAAACATGTCCTGGCAGCTTGATTTT
TTCTACAAAGTGTCCTTATCGGCCTTATATTTCCGATCAGAGGGAGAGTA
TCATAGTCCGTCACAAGCACCATCATTTCGATTTCGGTTTTGGTTCCAGT
AGTTTGGATGGCCTCCAACCAATGGGCAGACAGAGTATGGTAGAACGTGT
CTCGCACGTGCCGGCAGCAAAGCCGCGTGCGTGCAATCACGTCGATTTGT
TTTATTTGCCCCAAAATATGATCGATACATATCTCAGCAATGTCGGTACT
TTCTGCTGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCGGTTCATGATGTTTCTGTCGGT
GTCTTGTGTCATTTTCGGAGTTTCCTGGTGCTTGTTCGTCGCCGTCTCAT
TGCCCCCATTCTCGACACTCTGATCCAGACCACCTACATTTGTATATTCG
GTCGAGATGGTTTTGGGCAGCTCAGCTCACATGTAATGTACACGTGTGCT
CACGTTTTCGCAAGCAGCTCTGTGTCGACCGCACTCCCTCTGTTTTGTGC
TCATTCGGTCCCTCCCCACCTTCTCCCTCGCCTGTGAAATCCCTTGGTTG
TACGTTCTTGCCGCCAGACGGAAGAGGAGTTGTTGGCTTTGACCGCGGAC
GCCAGGAAAAGGGCTGAGGAGGAGGCCGACGACGGCTGGTAAAGCTGGTA
AAGCAGCCAGCTTGACACCCTAACCGGAAGAGGACAAGCCACTTGGAAGA
AATTGCGCCCATTTGTTTTTGTTGGGTTTGATCACGCCCGGATAACAGAG
CCTTGGCGGGTTGTACGTGCTCCATGTTGTGAAAGCTGGTTCGGAAGCGT
TACAGCGGCTGCAGCGGTGTCGCGTCCGGCTTGCGACTTAGGTAGATGAC
TTCGGCAGCACTGTTGTTTGTTTAAAGTAGATGGTGTTTTTGGGCTGGGG
GGAAGCTCGTTTGCTGAGGCCGCGGCACGTGCTTGCTTGCTTCACCTGTT
CGGTGCTCTTGCGGACGAGTTTCTTTTTTTCGATAATATGTGGTGACAAC
GCTCTTTAAATTTAAAGATAGACTTCGAAGTGCATCGTCATCATATTGAT
CATCTCAATGCAAGCGACTCGCCAGCAGTCATTTTCATTTTTCTCGGTTG
AGCTCGCGCTCGTCTTATGATACGGACGGGTCTTCTCAGATAGTAGGAAT
TGTCCTGCGAAGTGCTCATGTGGTGTCGCACTCAGACCGTTTGACCTCGA
CGAGTGAGGGTGAGAGGGCGTTGGCCTTGGAAAAACTTCCTCAAAACATA
AATCAAAGCGTCGTGGGTGGTGAACATTTTTCAATTTGTTTTTAATGTTT
TTGTGTTTTTGTCGGGGTTCCGGTTCAGAGAGGCGCTATTATTTATTTTT
CTACGGATACCCACATGGTTACCAGCGCCCGGACGAGTCGGATGAGGATG
CGAGCAAATTTAGAAGCACCATTTGTTCAGCTATTCAGTATTTCGTACAC
GAAGCCGGGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig920:21254..25114+

>mRNA_L-elsbetiae_contig920.18226.1 ID=mRNA_L-elsbetiae_contig920.18226.1|Name=mRNA_L-elsbetiae_contig920.18226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=990bp|location=Sequence derived from alignment at L-elsbetiae_contig920:21254..25114+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGATTCGCCGGGGCACTAGTGTTCTTCCTTCCCGTCACCTCGGCCTT
CCTGGCCCCCACAGCGTCCCTTCCGCGTAGCAGCAGTGCACACCACGTCA
GCGCCAGGTCACCTTTCGTCGGCGGCGTTCAGGCACCATCATCACAGCAG
CCGCAGCTGCGACGGCAACCGAGCTCGTCGTTGAACATGGTCGACCAAAA
CGTAATCTACGGTGGCCTCGTGGCGTTTGCGGGTCTCGCTGCTGGCGCGG
GAATGGTTGCCCTCACGGAGAAGGCAGGGGTGCGCTCGGAAGAGCGCGGG
GCGTTGTCGTATGAGATGAGATTCGCCGGGGCACTAGTGTTCTTCCTTCC
CGTCACCTCGGCCTTCCTGGCCCCCACAGCGTCCCTTCCGCGTAGCAGCA
GTGCACACCACGTCAGCGCCAGGTCACCTTTCGTCGGCGGCGTTCAGGCA
CCATCATCACAGCAGCCGCAGCTGCGACGGCAACCGAGCTCGTCGTTGAA
CATGGTCGACCAAAACGTAATCTACGGTGGCCTCGTGGCGTTTGCGGGTC
TCGCTGCTGGCGCGGGAATGGTTGCCCTCACGGAGAAGGCAGGGGTGCGC
TCGGAAGAGCGCGGGGCGTTGTCGTATGAGAGGAAGATGAAGATGCAGGC
AATGTTCATGGAAGACGATGTGGTGGAGACATCGGATGTGGACGACGTGA
GGTACAACATGCGCAGGGCCCTCCGCGCCAACCAGAGGAAGATGAAGATG
CAGGCAATGTTCATGGAAGACGATGTGGTGGAGACATCGGATGTGGACGA
CGTGAGGTACAACATGCGCAGGGCCCTCCGCGCCAACCAGACGGAAGAGG
AGTTGTTGGCTTTGACCGCGGACGCCAGGAAAAGGGCTGAGGAGGAGGCC
GACGACGGCTGGTAAACGGAAGAGGAGTTGTTGGCTTTGACCGCGGACGC
CAGGAAAAGGGCTGAGGAGGAGGCCGACGACGGCTGGTAA
back to top