prot_L-elsbetiae_contig9199.18216.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9199.18216.1
Unique Nameprot_L-elsbetiae_contig9199.18216.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length938
Homology
BLAST of mRNA_L-elsbetiae_contig9199.18216.1 vs. uniprot
Match: A0A6H5JFG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG5_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 1.030e-169
Identity = 345/684 (50.44%), Postives = 413/684 (60.38%), Query Frame = 0
Query:    2 GHVDNRVSLEEMIAGFRKIRREWATVKAEKSGRAVLAKVVRLMERAGMSLEEWFCFMDMSQNGRGDGKLTALELRSGLERLVTHIARRECCCRAYKCDKIPNYGLPPRADAQAS------SSTNGRDGTVRAKSTGFGNCL----------------QRGASQALLDR------PDYDEQHANQPIQSGS--TGAFDFTPDLAQATVPDVAIGNLDAAERPCSEHDGEKGEDGQRDEADI--NAFNGGESGPQNKEQQRHDHWKAGGDAARGTSXXXXXXXXXXXXKAKTSAERWQASQGSACGGGNKW-----------------------------------------GAKPEGEHEDQEEYFK--KEAKGVDG--EEARKGDNKTSE-GLMASGRPIACRGHALEGMVYLGQRAYFLGLERQTFGSKEISDLMRFIDTDVNFTLDIQEMRFAISRMRSYPDEESGTRTNEAGHLLEVLEQYMHRTGARFTDCLVHHHAFTVCLNTHNTDRDRNGYIEKHELRSLFETLSREPARRRARANARAELAEENLRQKELRAIEAQDAWIRLEMFKKAGVYSVLKRIEVWQTRTGKRLSEGFHGGTGAGAGNRGLDLDELAAFMRNLDLDLSPNEAMLVLRHLNGGQNGLIEVKEVAAAVRTIRRYESIIRAAKRSGAISATRNGG 607
            G  D++V+LEEMI+GFRKIRR+WATVKAE++GR VLAKVVRLM RAGMSLEEWF FMD+SQNG GDGKLTALELR G ERL THIARRECCCRA+KC++IPNYGLPP    Q         + NG     R+ S+G    L                Q    QA  DR        ++E    Q   S S   G      D + +  PD   G  D  E P  +  G +GE GQ++E+     +  G  SG          H ++ G  ARG S             A+  ++      G+ CGGG                                            GAK EG    QE++     +A  ++   EE  K   +TS   ++ +GR +ACR HAL+GMVYLGQRAYFLGLE +TF SK++SDLMRFIDTDV+F+LDI+EMR AISR+ +  DE+   RT+EAG+LL+VLE YMHRTGARFTD          CL+      +R+GYIEKHELR LFE LSREPARR+ARA A+AELAEE  RQ+ELR  EA DA  RLE +KKAGVYSVLKRIEVWQTRTGKRLSE F G TG GAGN GLD+DELAAFMRNLD +LSP EAMLVLRHL+GG NGL+EV EVA AVR IRRYE I++AA+    +S    GG
Sbjct:   87 GRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDPAGDGFETANGTSINCRSSSSGVAKDLSIVERTGKQENSSSHAQDHGHQAPSDRGKHHHHEGFEETDPTQHNHSSSHHQGCTTINRDTSSSITPD---GIPDPTEEPEPKRAGGEGERGQQEESKPLGGSAQGAASGGSLGSAFPMGHHRSQG--ARGASLYGDSGSVD----ARRLSQGMNVLPGNRCGGGVXXXXXXXXXXXXXXXXXXXTIARRSEEEPGHEIDHCESDLVPMGAK-EGPSAGQEQWCGAGNQAGPIENYKEEGVKSRTRTSSIDMLNAGRAVACREHALDGMVYLGQRAYFLGLENETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDA-RTSEAGNLLQVLESYMHRTGARFTDVF-------FCLDRRV---NRSGYIEKHELRMLFEALSREPARRKARARAKAELAEERARQQELRTAEAHDALERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHVLSGPSGGG 749          
BLAST of mRNA_L-elsbetiae_contig9199.18216.1 vs. uniprot
Match: D8LCN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN4_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 2.010e-115
Identity = 282/661 (42.66%), Postives = 340/661 (51.44%), Query Frame = 0
Query:    2 GHVDNRVSLEEMIAGFRKIRREWATVKAEKSGRAVLAKVVRLMERAGMSLEEWFCFMDMSQ-----NGRGDGKLTALELRSGLERLVTHIARRECCCRAYKCDKIPNYGLPPRADAQASSSTNGRDGTVRAKSTGFGNCLQRGASQALL--DRPDYDEQHANQPIQSGSTGAFDFTPDLAQATVPDVAIGNLDAAERPCSEHDGEKGEDGQRDEADINAFNGGESGPQNKEQQRHDHWKAGGDAARGTSXXXXXXXXXXXXKAKTSA-ERWQASQGSACGGGNKWGAKPEGEHEDQEEYFKKEAKGVDGEEARKGDNKTSEGLMASGRPIACRGHALEGMVYLGQRAYFLGLERQTFGSKEISDLMRFIDTDVNFTLDIQEMRFAISRMRSYPDEESGTRTNEAGHLLEVLEQYMHRTGARFTDCLVHHHAFTVCLNTHNTDRDRNGYIEKHELRSLFETLSREPARRRARANARAELAEENLRQKELRAIEAQDAWIRLEMFKKAGVYSVLKRIEVWQTRTGKRLSEGFHGGTGAGAGNRGLDLDELAAFMRNLDLDLSPNEAMLVLRHLNGGQNGLIEVKEVAAAVRTIRRYESIIRAAKRSGAISATRNGGGFXXXXXXXXXDLSGGRGAALDDAAEIGWNGDGYGCWGGPGGLWECP 654
            G  D++V+LEEMI+GFRKIRR+WATVKAE++GR VLAKVVRLM RAGMSLEEWF FMD SQ     +  G G+                        R  + +  P  G      AQ   S     G     +   G+    G   A L  D    D +  ++ +   S        D                +    +  D E G +  R E+D+                                               T A ER  A Q   CG  N+ G     + E  E   +  A  +D              ++ +GR IACR HAL+GMVYLGQRAYFLGLE +TF SK++SDLMRFIDTDV+F+LDI+EMR AISR+ +  DE+   RT+EAG+LL+VLE YMHRTGARFTD                                +F  L REPARR+ARA A+AELAEE +RQKELR  EA DA  RLEM+KKAGVY+VLKRIEVWQTRTGK LSE F G TG G GN GLD+DELAAFMRNLD +LSP EAMLVLRHL+GG NGL+EV EVA AVR IRRYE I++AA+    +S   +GG            +S    AA DD              GG G LWE P
Sbjct:   87 GRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDTSQEPDPRHAGGGGE------------------------RGQQGESKPLGG-----SAQGDVS-----GGSLGSAVPMGHHQPEGTHGASLYGDNGSVDARRLSRVMNVLSGSPCGGGIDGXXXXXXXXXXXXXXXSNTIVTRSDEEPGYEIDRCESDL---------------------------------------------VPTGAKERPSAGQEQWCGTDNQAGHIENNKEEGAESRTR--ASSID--------------VLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDA-RTSEAGNLLQVLESYMHRTGARFTD--------------------------------VFFFLDREPARRKARARAKAELAEERIRQKELRTAEAHDASERLEMYKKAGVYAVLKRIEVWQTRTGKHLSESFRGSTGDGTGNHGLDVDELAAFMRNLDFELSPAEAMLVLRHLDGGNNGLVEVGEVATAVRDIRRYEMIVKAAREDHILSGPSSGGRARRPPLATAGTVSS-YDAAFDDXXXXXXXXXXXXXEGGVGYLWESP 618          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9199.18216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFG5_9PHAE1.030e-16950.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCN4_ECTSI2.010e-11542.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 462..489
NoneNo IPR availableGENE3D1.10.238.10coord: 430..588
e-value: 2.6E-5
score: 26.3
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 435..447
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 435..457
score: 8.823
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 350..385
score: 5.475
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 66..85
score: 6.87
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 536..551
score: 5.392
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 51..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9199contigL-elsbetiae_contig9199:347..6278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9199.18216.1mRNA_L-elsbetiae_contig9199.18216.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9199 323..6278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9199.18216.1 ID=prot_L-elsbetiae_contig9199.18216.1|Name=mRNA_L-elsbetiae_contig9199.18216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=938bp
MGHVDNRVSLEEMIAGFRKIRREWATVKAEKSGRAVLAKVVRLMERAGMS
LEEWFCFMDMSQNGRGDGKLTALELRSGLERLVTHIARRECCCRAYKCDK
IPNYGLPPRADAQASSSTNGRDGTVRAKSTGFGNCLQRGASQALLDRPDY
DEQHANQPIQSGSTGAFDFTPDLAQATVPDVAIGNLDAAERPCSEHDGEK
GEDGQRDEADINAFNGGESGPQNKEQQRHDHWKAGGDAARGTSDDGGGGG
GGGGGKAKTSAERWQASQGSACGGGNKWGAKPEGEHEDQEEYFKKEAKGV
DGEEARKGDNKTSEGLMASGRPIACRGHALEGMVYLGQRAYFLGLERQTF
GSKEISDLMRFIDTDVNFTLDIQEMRFAISRMRSYPDEESGTRTNEAGHL
LEVLEQYMHRTGARFTDCLVHHHAFTVCLNTHNTDRDRNGYIEKHELRSL
FETLSREPARRRARANARAELAEENLRQKELRAIEAQDAWIRLEMFKKAG
VYSVLKRIEVWQTRTGKRLSEGFHGGTGAGAGNRGLDLDELAAFMRNLDL
DLSPNEAMLVLRHLNGGQNGLIEVKEVAAAVRTIRRYESIIRAAKRSGAI
SATRNGGGFGGGGGSAGGDLSGGRGAALDDAAEIGWNGDGYGCWGGPGGL
WECPAGSGFGGQAPSLELVPVVFHPPVGVITHGRASSAPARGRRVPNRAG
TAAGRRPTTAAAAGSAATPAAPAAAAAAAAAAAAAAAAAVPGTTSTAFRR
GILRTSPALHGGKAGSPGAPAASGRGFGARGDGGGGGGGGGAVQGSIETS
LAQREHQRQADPGRKSPRPAPRLAPRLAPRSLEASSGRFVTGGAAAAAAR
GVDAAGPVPGVAATAPAPAVPGEEAPLPPWELGLSVGLGGPGGWWPAATS
AVEDGSRLSIYTGSMLDGRWLHSLDSRLRATMRATRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair