mRNA_L-elsbetiae_contig9192.18213.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9192.18213.1
Unique NamemRNA_L-elsbetiae_contig9192.18213.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: D7G6C5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C5_ECTSI)

HSP 1 Score: 632 bits (1630), Expect = 6.120e-219
Identity = 399/643 (62.05%), Postives = 470/643 (73.09%), Query Frame = 1 
Query:    1 LQIWDLSA-DPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSLIAGSGSTLGGVASTAQVLSGSSATPVPQPPIMQPSPAMQPXXSPPT-MLPLGAAASSSEDAFSALAVDLPVQDSTSSVGKEAEVGTAAPERGLPVLEQPFRTAHPQKNTS-SRSATSTNVSEDGSPGGDSQPSTAGMQELVAASSALLSVTHEVSTSHNQVLATQSSSVLSVKVLIEQLQAEKVSLGSIIEAGGVEHMDNERQLREMSTEIKSLTAELATLRNKIQEQQKESAKLRARVTQAAIERGTLVAEVRACDSSLSALSEENIFLRRAVLGENGVSRESSSTPQRPAADSGEGSSALGEQVAERLQVSP-----EPRVDTPTEPDMPAKTPPLPXPQPSMVP-PSIIEDPFAEVVGE------GSDVP---AVEPQDINND-EREQSGFDAFPG--NGFENGTDPFAINGFSENGVGEVSSDPFTATDAVFTNATAAADGFDAFPSSAAQQFDAFGQ 1866
            ++IWD+SA DP LNYLRPEDFYV+MRLIAMAQASPGVPISA RL +E     PLARMQN PPPP GSVSQG+  SG ALV   EP + ADPY MSGQERSKYESIFP YDSDRDGFVTG EAV+LFSKSRLPRE    IWQLADADGDSKLS+AEFC+GMHLIVCVSKKGLPCP TRPPSL+ G+ S  G V + AQ   GS AT VP  P+++PSPAM+P  SPP  M+PLG AAS+S DAFSALAVDL  +D  S+VG EAE  T A E+G P LE P  +   Q NT+ SRS T T+VS+  SP G+S P  AGMQEL AASSALL+VT + ST+H+Q  A QSSS+ S+K L+E L+AEK SL SI++AG     DNE+ LR+M TE+++L  EL  LRN+ Q+QQ E+A+LRARV +  ++R TL+AE++ACDSS+    EEN FLR+ VLGENG  +E  S P     +  EGSS  G+ +AE+L+VSP     +P  D P EP MPAK     X    MVP P+ +EDPFAEVV E      G   P     EP ++N   EREQSGFDAFP   + FENGTDPFA++G S NG GE  +DPFTATDAVFTNATAAADGFDAFP++ AQQFDAFGQ
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVA-HEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE----IWQLADADGDSKLSLAEFCIGMHLIVCVSKKGLPCPMTRPPSLLPGTRSASGVVTNPAQAHGGSLATSVPPSPVVRPSPAMRPPSSPPAVMMPLGTAASNS-DAFSALAVDLATKDLMSTVGSEAEAKTPASEQGPPALEPPMTSTQHQPNTAVSRSPTGTHVSDHTSPEGESSP--AGMQELSAASSALLAVTRDASTAHSQATAAQSSSIHSMKKLVEILKAEKESLSSIVKAGRATQTDNEQLLRDMGTELENLRHELDCLRNEYQKQQGETAELRARVARTGVDRATLLAEIKACDSSIRTQKEENAFLRQHVLGENGTLKEKDSEPTTANGED-EGSSLAGK-MAEQLEVSPAPEEAKPTTDAPPEPMMPAKX--XXXXXHGMVPQPTAVEDPFAEVVEEQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGLSANGSGEAVADPFTATDAVFTNATAAADGFDAFPAADAQQFDAFGQ 631
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: D7FK23_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK23_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 7.220e-57
Identity = 104/134 (77.61%), Postives = 112/134 (83.58%), Query Frame = 1 
Query:    1 LQIWDLSA-DPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPRE 399
            ++IWD+SA DP LNYLRPEDFYV+MRLIAMAQASPGVPISA RL +E     PLARMQN PPPP GSVSQG+  SG ALV   EP + ADPY MSGQERSKYESIFP YDSDRDGFVTG EAV+LFSKSRLPRE
Sbjct:    1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVA-HEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE 133
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A835ZIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.680e-41
Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSV-SQGIPRSGSALVVPPEPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            Q+WD++   + N+L   +FY +MRLIAMAQ+  G P++  +L VE   P+PLAR+Q   PP  G + SQG+  SG         P   DPY M  +E +KY+ +FP YD D DGFVTG EAV LF+KS L R  L+Q+W +AD+D D++LS AEF V MHLIVC+SKKGLP P   PPSL
Sbjct:   51 QVWDIADSSKQNFLTRPEFYCAMRLIAMAQS--GAPLTREKLIVEGTVPIPLARLQGVAPPSGGLMYSQGLGPSG---------PSQDDPYFMLPEELAKYDMLFPSYDPDGDGFVTGAEAVPLFTKSGLDRGVLKQVWDMADSDRDARLSRAEFAVAMHLIVCISKKGLPVPPALPPSL 219
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A4D9DB77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB77_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.250e-33
Identity = 81/185 (43.78%), Postives = 109/185 (58.92%), Query Frame = 1 
Query:    7 IWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAP--PPPAGSVSQGIPRSGSALVVPPEPP---LAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSLIA 546
            IW L+   + ++L  EDFYV++RLI +AQ   G+  +  ++Q  +  P+P AR  N P  PPP  + +   P    A           L  D Y MS ++R++Y + F   D + DGFV G +AVELFS+S L R  L ++W LADAD DS+LS  EF V MHLIVC+SK+GLP P   PPSL A
Sbjct:   82 IWSLADSRQRHFLAREDFYVALRLIGLAQN--GIAPTREKIQETATAPVPYARFSNVPLAPPPLPAPATATPPQDPAXXXXXXXXXSSLEGDGYAMSSEDRARYLNHFGPCDVNGDGFVDGPQAVELFSRSGLDRSVLGRVWDLADADNDSRLSPGEFAVAMHLIVCISKRGLPVPERLPPSLAA 264
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A0P1A6M0_PLAHL (Transcription factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M0_PLAHL)

HSP 1 Score: 141 bits (355), Expect = 3.660e-31
Identity = 84/185 (45.41%), Postives = 107/185 (57.84%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPP------EPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            +IW ++   + + L   +FYV+MRLI+M Q   G  +S  R    +A   PLA M   PPP   S+ Q   +S  +  + P      + P    PY +S  E+SKY++IF  YD+DRDGF+ G EAV LF  S L R  LR IW +AD   DSKLS  EF V MHLIVCVSK+GLP PAT P  L
Sbjct:  593 EIWSIADAQQRSELSRNEFYVAMRLISMIQR--GEQVSVQRFSQFAAMSYPLAMMDGMPPP--SSIQQQPIQSQESHPIEPLCGSMQQQPTPTGPYALSADEKSKYDNIFQQYDTDRDGFIMGSEAVTLFQMSGLDRIVLRNIWSMADITQDSKLSAQEFYVAMHLIVCVSKRGLPMPATLPREL 773
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A5D6Y2G2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2G2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.850e-31
Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGS--VSQGIPRSGSA-LVVPPEPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSLI 543
            ++W L+   R   L   +FYV+MRLIAMAQ   G P+SA R    +A P PL  +   P PP      + G    GSA          A  PY ++ +E+++Y++IF  YD+DRDGF+ G EAV LF  S L R  LR+IW LAD+  DSKL + EF V MHLIVC SK+GLP P   P  L+
Sbjct:   88 EVWGLADTQRKGELSRNEFYVAMRLIAMAQR--GEPVSAQRFAELAATPFPLPTLDGVPSPPMHQQFATTGAGGFGSAPXXXXXXXXXARGPYAVTDEEKTRYDAIFAQYDADRDGFLLGGEAVSLFQLSGLDRNLLREIWALADSGQDSKLDVKEFYVAMHLIVCASKRGLPVPPQLPHELV 268
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A0W8DN66_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN66_PHYNI)

HSP 1 Score: 133 bits (335), Expect = 1.310e-30
Identity = 79/185 (42.70%), Postives = 104/185 (56.22%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAA------DPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            ++W ++   R + L   +FYV+MRLI+MAQ   G  +SA R    +    PL  M+  PPP      Q  P    A +  P+    +        Y ++  E+SKY+ +F  YD+DRDGF+ G EAV LF  S L R  LR IW +AD   DSKLS+ EF V MHLIVCVSK+GLP P+T P  L
Sbjct:   35 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPP------QQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPREL 211
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: A0A485LGQ3_9STRA (Aste57867_21084 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGQ3_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.030e-29
Identity = 74/179 (41.34%), Postives = 104/179 (58.10%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAADPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            ++W ++   + + L P DFYV+MRLIAMAQ   G P++  R    +A P  LA+++  PPPP            SA+     PP A   Y ++  E++KY+ IF  YD+D DGF+ G +A  LF  S + R  LR +W LAD   D +L M EF V MHLIVCV+K+ LP P++ PP +
Sbjct:  105 EVWTIADSRQASQLLPGDFYVAMRLIAMAQQ--GQPVALQRFYELAAAPFALAQLEGVPPPP------------SAM-----PPQAT--YAITSDEKTKYQGIFAQYDTDHDGFLNGPDAAALFQMSGMDRNDLRTVWTLADRTSDGRLDMTEFYVAMHLIVCVTKRNLPLPSSIPPDM 262
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: W2ZUS1_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUS1_PHYPR)

HSP 1 Score: 133 bits (335), Expect = 8.030e-29
Identity = 79/185 (42.70%), Postives = 104/185 (56.22%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAA------DPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            ++W ++   R + L   +FYV+MRLI+MAQ   G  +SA R    +    PL  M+  PPP      Q  P    A +  P+    +        Y ++  E+SKY+ +F  YD+DRDGF+ G EAV LF  S L R  LR IW +AD   DSKLS+ EF V MHLIVCVSK+GLP P+T P  L
Sbjct:   87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPP------QQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPREL 263
[Close]
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Match: W2QJ60_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QJ60_PHYPN)

HSP 1 Score: 133 bits (335), Expect = 9.570e-29
Identity = 79/185 (42.70%), Postives = 104/185 (56.22%), Query Frame = 1 
Query:    4 QIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARPLPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAA------DPYVMSGQERSKYESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKLSMAEFCVGMHLIVCVSKKGLPCPATRPPSL 540
            ++W ++   R + L   +FYV+MRLI+MAQ   G  +SA R    +    PL  M+  PPP      Q  P    A +  P+    +        Y ++  E+SKY+ +F  YD+DRDGF+ G EAV LF  S L R  LR IW +AD   DSKLS+ EF V MHLIVCVSK+GLP P+T P  L
Sbjct:   87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPP------QQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPREL 263
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9192.18213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C5_ECTSI6.120e-21962.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FK23_ECTSI7.220e-5777.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZIN7_9STRA1.680e-4151.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DB77_9STRA5.250e-3343.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0P1A6M0_PLAHL3.660e-3145.41Transcription factor n=1 Tax=Plasmopara halstedii ... [more]
A0A5D6Y2G2_9STRA7.850e-3144.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0W8DN66_PHYNI1.310e-3042.70Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A485LGQ3_9STRA3.030e-2941.34Aste57867_21084 protein n=1 Tax=Aphanomyces stella... [more]
W2ZUS1_PHYPR8.030e-2942.70Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
W2QJ60_PHYPN9.570e-2942.70Uncharacterized protein n=9 Tax=Phytophthora paras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9192contigL-elsbetiae_contig9192:1655..5408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score648.7
Seed ortholog evalue2.8e-183
Seed eggNOG ortholog2880.D7G6C5
KEGG koko:K12472
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
EggNOG free text desc.endocytosis
EggNOG OGsKOG0998@1,KOG0998@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-10_001340.1
Exons8
Model size1869
Cds size1869
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9192.18213.1prot_L-elsbetiae_contig9192.18213.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9192 1655..5408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816992.472701-CDS-L-elsbetiae_contig9192:1654..21971622816992.472701-CDS-L-elsbetiae_contig9192:1654..2197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 1655..2197 -
1691683967.1684947-CDS-L-elsbetiae_contig9192:1654..21971691683967.1684947-CDS-L-elsbetiae_contig9192:1654..2197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 1655..2197 -
1622816992.4845731-CDS-L-elsbetiae_contig9192:2689..28031622816992.4845731-CDS-L-elsbetiae_contig9192:2689..2803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 2690..2803 -
1691683967.1832063-CDS-L-elsbetiae_contig9192:2689..28031691683967.1832063-CDS-L-elsbetiae_contig9192:2689..2803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 2690..2803 -
1622816992.4948902-CDS-L-elsbetiae_contig9192:3042..31381622816992.4948902-CDS-L-elsbetiae_contig9192:3042..3138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3043..3138 -
1691683967.1943674-CDS-L-elsbetiae_contig9192:3042..31381691683967.1943674-CDS-L-elsbetiae_contig9192:3042..3138Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3043..3138 -
1622816992.5051374-CDS-L-elsbetiae_contig9192:3458..35601622816992.5051374-CDS-L-elsbetiae_contig9192:3458..3560Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3459..3560 -
1691683967.2045531-CDS-L-elsbetiae_contig9192:3458..35601691683967.2045531-CDS-L-elsbetiae_contig9192:3458..3560Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3459..3560 -
1622816992.515581-CDS-L-elsbetiae_contig9192:3701..39901622816992.515581-CDS-L-elsbetiae_contig9192:3701..3990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3702..3990 -
1691683967.215944-CDS-L-elsbetiae_contig9192:3701..39901691683967.215944-CDS-L-elsbetiae_contig9192:3701..3990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 3702..3990 -
1622816992.526-CDS-L-elsbetiae_contig9192:4206..45321622816992.526-CDS-L-elsbetiae_contig9192:4206..4532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 4207..4532 -
1691683967.2268126-CDS-L-elsbetiae_contig9192:4206..45321691683967.2268126-CDS-L-elsbetiae_contig9192:4206..4532Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 4207..4532 -
1622816992.5362353-CDS-L-elsbetiae_contig9192:4814..51201622816992.5362353-CDS-L-elsbetiae_contig9192:4814..5120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 4815..5120 -
1691683967.2355638-CDS-L-elsbetiae_contig9192:4814..51201691683967.2355638-CDS-L-elsbetiae_contig9192:4814..5120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 4815..5120 -
1622816992.547267-CDS-L-elsbetiae_contig9192:5315..54081622816992.547267-CDS-L-elsbetiae_contig9192:5315..5408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 5316..5408 -
1691683967.2441034-CDS-L-elsbetiae_contig9192:5315..54081691683967.2441034-CDS-L-elsbetiae_contig9192:5315..5408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9192 5316..5408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9192.18213.1

>prot_L-elsbetiae_contig9192.18213.1 ID=prot_L-elsbetiae_contig9192.18213.1|Name=mRNA_L-elsbetiae_contig9192.18213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=623bp
LQIWDLSADPRLNYLRPEDFYVSMRLIAMAQASPGVPISASRLQVESARP
LPLARMQNAPPPPAGSVSQGIPRSGSALVVPPEPPLAADPYVMSGQERSK
YESIFPVYDSDRDGFVTGVEAVELFSKSRLPREQLRQIWQLADADGDSKL
SMAEFCVGMHLIVCVSKKGLPCPATRPPSLIAGSGSTLGGVASTAQVLSG
SSATPVPQPPIMQPSPAMQPPPSPPTMLPLGAAASSSEDAFSALAVDLPV
QDSTSSVGKEAEVGTAAPERGLPVLEQPFRTAHPQKNTSSRSATSTNVSE
DGSPGGDSQPSTAGMQELVAASSALLSVTHEVSTSHNQVLATQSSSVLSV
KVLIEQLQAEKVSLGSIIEAGGVEHMDNERQLREMSTEIKSLTAELATLR
NKIQEQQKESAKLRARVTQAAIERGTLVAEVRACDSSLSALSEENIFLRR
AVLGENGVSRESSSTPQRPAADSGEGSSALGEQVAERLQVSPEPRVDTPT
EPDMPAKTPPLPPPQPSMVPPSIIEDPFAEVVGEGSDVPAVEPQDINNDE
REQSGFDAFPGNGFENGTDPFAINGFSENGVGEVSSDPFTATDAVFTNAT
AAADGFDAFPSSAAQQFDAFGQ*
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mRNA from alignment at L-elsbetiae_contig9192:1655..5408-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9192.18213.1 ID=mRNA_L-elsbetiae_contig9192.18213.1|Name=mRNA_L-elsbetiae_contig9192.18213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3754bp|location=Sequence derived from alignment at L-elsbetiae_contig9192:1655..5408- (Laminarionema elsbetiae ELsaHSoW15)
TTGCAGATCTGGGATCTGTCGGCCGATCCCAGATTGAACTACTTACGCCC
GGAGGATTTTTATGTGTCTATGCGGCTCATCGCTATGGCCCAGGTAGGAA
GCACACGCCGACGTGTGCATACGCGTCCATCTTATGCTGTTATCCCTCAA
GCGCGTACCGAGTGCGGCAACAGTAATATATTTATAGGAGTACATGTGTT
GAGTGCCACAACGACTACGTTTCGTTGCCAACGGTGTTTTTTTGTGTTTC
GTATATATCTGTGCCCTGGTTTGTCTTTGGATTGGCAGGCATCCCCAGGG
GTACCAATCTCTGCATCTCGACTGCAGGTGGAGAGCGCCCGCCCTCTCCC
GCTAGCTAGGATGCAGAATGCCCCCCCCCCGCCAGCAGGCTCTGTTTCAC
AAGGCATACCGCGATCAGGCAGTGCGTTAGTGGTGCCACCGGAGCCTCCT
CTGGCTGCTGATCCGTACGTCATGTCTGGCCAGGAGAGGTCAAAGTACGA
ATCGATATTTCCAGTGTACGATTCCGATCGAGACGGGTTTGTGACTGGTG
TTGAGGCCGTGGAGCTTTTCTCCAAGTCCCGCCTTCCCCGTGAGGTGAGT
TTCCTCAATTCGGCTTGGACAAGCCTCCTCCGGCTCAATCTACGGCCTCT
TCGCGCTGAATGAGAATTTGGTGACCGGGCTCCGAGGAGTTGCAACCGGT
AAATATTGCATAAGTGTAATTCGGAAATGGACGGCAGGTTAAGTCCGATA
ACTATCTTGCTCCGCCCGATGCACTTCGTGAGAAGTGAATGATTGAGCCT
GAGTTTGAAACGAAGAACTGACGGGCAGAACGGTTCATCGTCTCGCTTCG
CACGCCTGGTTGCCACCTGGTTACAGCAACTACGGCAAATTTGGCAGCTA
GCAGATGCTGACGGAGATAGCAAGCTTTCTATGGCGGAATTCTGCGTCGG
CATGCACCTGATTGTGTGTGTGAGCAAGAAGGGCCTACCATGTCCGGCGA
CCCGCCCCCCTAGCCTCATTGCCGGCTCTGGCAGCACTCTGGGTGGCGTA
GCAAGCACTGCGCAAGTTCTCAGTGGTTCATCTGCCACGCCGGTGCCACA
ACCGCCGATTATGCAACCGTCACCTGCGATGCAACCACCGCCCTCGCCTC
CTACGATGTTGCCCCTGGGTGCTGCAGCGTCTAGTTCTGAAGATGCGTTC
AGGTCGGTCCGAGCTTGACTGAACATTTACGTTACATGTTGTGTCTCCAA
GATGAGTATGGTACTCTGTGTACGGCACTCCGCACCAGCGCGATGTCGGG
TGCGGCGATGAAAAATTACACCTGGTGTTTTTGGGTGGTGTTTTTGGGCG
GGAAGGTACCTTGCCCGGTGCTTCACTTCGTGAGTACTTACCATCCTTGC
AAATCACTGTGTTCACAGCGCTCTGGCAGTTGATCTTCCCGTCCAAGACT
CGACATCATCAGTTGGCAAAGAGGCTGAGGTCGGAACGGCCGCGCCTGAG
CGAGGCCTACCTGTCTTAGAGCAACCATTCCGCACAGCCCACCCCCAAAA
AAACACGTCGTCGCGTTCGGCAACGAGCACGAATGTTTCCGAGGACGGTT
CTCCTGGTGGTGACTCCCAGCCCTCCACCGCGGGGATGCAGGAGCTGGTG
GCAGCATCAAGTGCGCTTCTATCTGTTACGCACGAGGTCTCAACCTCTCA
CAACCAGGTAAGCTTAAGTTGCCTCAGTATCTTCGGTTGTATTTCGATTG
TTCCTGAAGGCGACGATGGCGTGACTTGCTTGACGTGCTTGCCATGAAAA
ACGAAATGCCGCCATTCGTTGTTGTCGTCCCCTCTTTTTCAACGGTAGGT
ATTGGCGACACAGTCCTCCAGCGTGCTTAGCGTGAAAGTGCTGATCGAGC
AGCTCCAGGCCGAAAAGGTGTCGCTGGGCTCCATCATTGAAGCTGGCGGG
GTGAGAGAGAGAAGTTTCGCCTGGAGTTAAACTGGCGGCATGTGGGAGAG
AAGCAGTGTATGTAGAGTCGTTAAGCCGTGTGAAATCATTGTTTGAATAA
TTTCTGTTGCGCGGAAGTTCGCCCCTGATGGCCGGCGAATGTTTGCATCG
GTGCACTGCCTGGGCCCGCGACAGGCACGCAGAATCGACGCCGCCGTCTA
TGTGCTTTTTAGCCACTTTCAGGAGTGTTGGGTCGGCTTTGCCGTAGTAG
ACTCCAACGTTTAAATCAAACCCCCCTCAGATGCGCGATAAATATTTTGC
ACGGGCAATGCACGTTCTAGGTCGAGCACATGGACAACGAGCGGCAGCTT
CGCGAAATGAGCACCGAGATTAAAAGTCTAACTGCGGAGCTGGCAACCCT
CCGCAACAAGATTCAGGTGCGCTTTATTTGCTAAATAGAGAACCTCAAAT
AAGCGGGTGGGGGTGTTTTGAGTATGTCCCATCCGTCTGGTAGCGACGTT
GTGCGTCTGGAGTGTGCCCGCTACGAAGATCGAACGTAGTGTCTCGAGTG
TAGATTTTTTTCGCATCAATGCCCTCGGGGGATATCTCACCTCACGCTTC
CAGTTTCGCCCTGGCCGGAAAATCAACGCGATGCATATTTTTCTGTCCCG
TGCAGGAGCAGCAGAAGGAATCCGCCAAATTACGTGCTCGTGTGACACAA
GCAGCGATCGAGCGGGGTACTCTGGTTGCGGAAGTAAGAGCATGTGACTC
GTCGCTCAGTGCGCTATCGGTGCGTGTGCCTTGCGTGTTGTGCCTGTGCG
TGTTGCCTCGCTTGGAGATAGTTCGTTCGGTTCATTGGGTCGCATCGTGC
GGAGGTGTTGTTGACGTTGCTTTCCGTGGAAACTACCGGTTGTTTGCACA
CCGCCAACGCTCGACGCAGAATGAGACGAAGAGACAGCCACTTATAAGTG
AAGCAAAATGGCGTACCGCATTGTGCGGGGGCTATATCGCACACCCCCTG
AACCGACTGGGCAGCGAAAAGGGTGCCAACACCAAACAACAAGTTTTCGG
GCAGCTGTCGACGGAATCTTTCAAACGCCACCCTTTTCGGCCCTGACACG
CTCCTTGCTGTTGGGTTTCGAGCTCTGAAAATCGGTCCGGGGGGTGTGCG
GTGGCCCGCACAATTACGGTATTTGCCACTGACTGGCAAGCTTTTCGGAC
CACCGTTAAGTCAAGTCAAACCCATCACACCTTGCTTGCTATCATTGCAA
ATATTTTTCAGGAAGAAAACATTTTTTTGCGTCGAGCGGTGCTGGGCGAG
AATGGCGTGTCAAGAGAATCGAGCTCTACCCCACAACGTCCGGCTGCTGA
TAGTGGAGAGGGGTCGTCGGCTTTAGGAGAACAGGTGGCAGAACGCCTGC
AGGTCTCTCCCGAGCCCAGGGTTGACACTCCGACAGAGCCTGATATGCCA
GCCAAAACACCGCCACTCCCCCCACCCCAGCCTAGCATGGTGCCGCCGTC
TATTATTGAAGATCCCTTTGCTGAAGTTGTTGGCGAAGGCTCTGATGTAC
CAGCGGTCGAACCGCAGGACATCAACAACGACGAGAGAGAGCAGAGTGGA
TTTGATGCATTCCCTGGAAACGGATTCGAGAACGGAACGGACCCGTTTGC
CATCAATGGATTCAGTGAAAACGGTGTAGGAGAGGTTTCATCTGATCCGT
TCACCGCAACAGATGCTGTTTTTACGAATGCAACAGCCGCGGCCGATGGT
TTCGATGCTTTCCCTTCGTCGGCTGCGCAGCAGTTTGATGCCTTTGGGCA
GTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9192:1655..5408-

>mRNA_L-elsbetiae_contig9192.18213.1 ID=mRNA_L-elsbetiae_contig9192.18213.1|Name=mRNA_L-elsbetiae_contig9192.18213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3738bp|location=Sequence derived from alignment at L-elsbetiae_contig9192:1655..5408- (Laminarionema elsbetiae ELsaHSoW15)
TTGCAGATCTGGGATCTGTCGGCCGATCCCAGATTGAACTACTTACGCCC
GGAGGATTTTTATGTGTCTATGCGGCTCATCGCTATGGCCCAGTTGCAGA
TCTGGGATCTGTCGGCCGATCCCAGATTGAACTACTTACGCCCGGAGGAT
TTTTATGTGTCTATGCGGCTCATCGCTATGGCCCAGGCATCCCCAGGGGT
ACCAATCTCTGCATCTCGACTGCAGGTGGAGAGCGCCCGCCCTCTCCCGC
TAGCTAGGATGCAGAATGCCCCCCCCCCGCCAGCAGGCTCTGTTTCACAA
GGCATACCGCGATCAGGCAGTGCGTTAGTGGTGCCACCGGAGCCTCCTCT
GGCTGCTGATCCGTACGTCATGTCTGGCCAGGAGAGGTCAAAGTACGAAT
CGATATTTCCAGTGTACGATTCCGATCGAGACGGGTTTGTGACTGGTGTT
GAGGCCGTGGAGCTTTTCTCCAAGTCCCGCCTTCCCCGTGAGGCATCCCC
AGGGGTACCAATCTCTGCATCTCGACTGCAGGTGGAGAGCGCCCGCCCTC
TCCCGCTAGCTAGGATGCAGAATGCCCCCCCCCCGCCAGCAGGCTCTGTT
TCACAAGGCATACCGCGATCAGGCAGTGCGTTAGTGGTGCCACCGGAGCC
TCCTCTGGCTGCTGATCCGTACGTCATGTCTGGCCAGGAGAGGTCAAAGT
ACGAATCGATATTTCCAGTGTACGATTCCGATCGAGACGGGTTTGTGACT
GGTGTTGAGGCCGTGGAGCTTTTCTCCAAGTCCCGCCTTCCCCGTGAGCA
ACTACGGCAAATTTGGCAGCTAGCAGATGCTGACGGAGATAGCAAGCTTT
CTATGGCGGAATTCTGCGTCGGCATGCACCTGATTGTGTGTGTGAGCAAG
AAGGGCCTACCATGTCCGGCGACCCGCCCCCCTAGCCTCATTGCCGGCTC
TGGCAGCACTCTGGGTGGCGTAGCAAGCACTGCGCAAGTTCTCAGTGGTT
CATCTGCCACGCCGGTGCCACAACCGCCGATTATGCAACCGTCACCTGCG
ATGCAACCACCGCCCTCGCCTCCTACGATGTTGCCCCTGGGTGCTGCAGC
GTCTAGTTCTGAAGATGCGTTCAGCAACTACGGCAAATTTGGCAGCTAGC
AGATGCTGACGGAGATAGCAAGCTTTCTATGGCGGAATTCTGCGTCGGCA
TGCACCTGATTGTGTGTGTGAGCAAGAAGGGCCTACCATGTCCGGCGACC
CGCCCCCCTAGCCTCATTGCCGGCTCTGGCAGCACTCTGGGTGGCGTAGC
AAGCACTGCGCAAGTTCTCAGTGGTTCATCTGCCACGCCGGTGCCACAAC
CGCCGATTATGCAACCGTCACCTGCGATGCAACCACCGCCCTCGCCTCCT
ACGATGTTGCCCCTGGGTGCTGCAGCGTCTAGTTCTGAAGATGCGTTCAG
CGCTCTGGCAGTTGATCTTCCCGTCCAAGACTCGACATCATCAGTTGGCA
AAGAGGCTGAGGTCGGAACGGCCGCGCCTGAGCGAGGCCTACCTGTCTTA
GAGCAACCATTCCGCACAGCCCACCCCCAAAAAAACACGTCGTCGCGTTC
GGCAACGAGCACGAATGTTTCCGAGGACGGTTCTCCTGGTGGTGACTCCC
AGCCCTCCACCGCGGGGATGCAGGAGCTGGTGGCAGCATCAAGTGCGCTT
CTATCTGTTACGCACGAGGTCTCAACCTCTCACAACCAGCGCTCTGGCAG
TTGATCTTCCCGTCCAAGACTCGACATCATCAGTTGGCAAAGAGGCTGAG
GTCGGAACGGCCGCGCCTGAGCGAGGCCTACCTGTCTTAGAGCAACCATT
CCGCACAGCCCACCCCCAAAAAAACACGTCGTCGCGTTCGGCAACGAGCA
CGAATGTTTCCGAGGACGGTTCTCCTGGTGGTGACTCCCAGCCCTCCACC
GCGGGGATGCAGGAGCTGGTGGCAGCATCAAGTGCGCTTCTATCTGTTAC
GCACGAGGTCTCAACCTCTCACAACCAGGTATTGGCGACACAGTCCTCCA
GCGTGCTTAGCGTGAAAGTGCTGATCGAGCAGCTCCAGGCCGAAAAGGTG
TCGCTGGGCTCCATCATTGAAGCTGGCGGGGTATTGGCGACACAGTCCTC
CAGCGTGCTTAGCGTGAAAGTGCTGATCGAGCAGCTCCAGGCCGAAAAGG
TGTCGCTGGGCTCCATCATTGAAGCTGGCGGGGTCGAGCACATGGACAAC
GAGCGGCAGCTTCGCGAAATGAGCACCGAGATTAAAAGTCTAACTGCGGA
GCTGGCAACCCTCCGCAACAAGATTCAGGTCGAGCACATGGACAACGAGC
GGCAGCTTCGCGAAATGAGCACCGAGATTAAAAGTCTAACTGCGGAGCTG
GCAACCCTCCGCAACAAGATTCAGGAGCAGCAGAAGGAATCCGCCAAATT
ACGTGCTCGTGTGACACAAGCAGCGATCGAGCGGGGTACTCTGGTTGCGG
AAGTAAGAGCATGTGACTCGTCGCTCAGTGCGCTATCGGAGCAGCAGAAG
GAATCCGCCAAATTACGTGCTCGTGTGACACAAGCAGCGATCGAGCGGGG
TACTCTGGTTGCGGAAGTAAGAGCATGTGACTCGTCGCTCAGTGCGCTAT
CGGAAGAAAACATTTTTTTGCGTCGAGCGGTGCTGGGCGAGAATGGCGTG
TCAAGAGAATCGAGCTCTACCCCACAACGTCCGGCTGCTGATAGTGGAGA
GGGGTCGTCGGCTTTAGGAGAACAGGTGGCAGAACGCCTGCAGGTCTCTC
CCGAGCCCAGGGTTGACACTCCGACAGAGCCTGATATGCCAGCCAAAACA
CCGCCACTCCCCCCACCCCAGCCTAGCATGGTGCCGCCGTCTATTATTGA
AGATCCCTTTGCTGAAGTTGTTGGCGAAGGCTCTGATGTACCAGCGGTCG
AACCGCAGGACATCAACAACGACGAGAGAGAGCAGAGTGGATTTGATGCA
TTCCCTGGAAACGGATTCGAGAACGGAACGGACCCGTTTGCCATCAATGG
ATTCAGTGAAAACGGTGTAGGAGAGGTTTCATCTGATCCGTTCACCGCAA
CAGATGCTGTTTTTACGAATGCAACAGCCGCGGCCGATGGTTTCGATGCT
TTCCCTTCGTCGGCTGCGCAGCAGTTTGATGCCTTTGGGCAGTAAGAAGA
AAACATTTTTTTGCGTCGAGCGGTGCTGGGCGAGAATGGCGTGTCAAGAG
AATCGAGCTCTACCCCACAACGTCCGGCTGCTGATAGTGGAGAGGGGTCG
TCGGCTTTAGGAGAACAGGTGGCAGAACGCCTGCAGGTCTCTCCCGAGCC
CAGGGTTGACACTCCGACAGAGCCTGATATGCCAGCCAAAACACCGCCAC
TCCCCCCACCCCAGCCTAGCATGGTGCCGCCGTCTATTATTGAAGATCCC
TTTGCTGAAGTTGTTGGCGAAGGCTCTGATGTACCAGCGGTCGAACCGCA
GGACATCAACAACGACGAGAGAGAGCAGAGTGGATTTGATGCATTCCCTG
GAAACGGATTCGAGAACGGAACGGACCCGTTTGCCATCAATGGATTCAGT
GAAAACGGTGTAGGAGAGGTTTCATCTGATCCGTTCACCGCAACAGATGC
TGTTTTTACGAATGCAACAGCCGCGGCCGATGGTTTCGATGCTTTCCCTT
CGTCGGCTGCGCAGCAGTTTGATGCCTTTGGGCAGTAA
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