prot_L-elsbetiae_contig918.18203.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig918.18203.1
Unique Nameprot_L-elsbetiae_contig918.18203.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length68
Homology
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BLAST of mRNA_L-elsbetiae_contig918.18203.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.720e-20
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 0 
Query:    1 MFEAVQLLMWKHAGET-GGEVPITSRGDPWKHRSMPVPREQWGKAITLEFSPRSSSS 56
            MFEAVQ+LM KHA ET GGEVPITS GD + HRSMP+PREQWGKAITLEFSPRS SS
Sbjct: 1202 MFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKAITLEFSPRSCSS 1258
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig918.18203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE2.720e-2082.46HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig918contigL-elsbetiae_contig918:4800..6622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig918.18203.1mRNA_L-elsbetiae_contig918.18203.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig918 4711..8127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig918.18203.1 ID=prot_L-elsbetiae_contig918.18203.1|Name=mRNA_L-elsbetiae_contig918.18203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
MFEAVQLLMWKHAGETGGEVPITSRGDPWKHRSMPVPREQWGKAITLEFS
PRSSSSTPTSNQSRNPR*
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