prot_L-elsbetiae_contig9140.18169.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9140.18169.1
Unique Nameprot_L-elsbetiae_contig9140.18169.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length280
Homology
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 3.490e-61
Identity = 113/153 (73.86%), Postives = 124/153 (81.05%), Query Frame = 0
Query:  136 RERVPVSEVAEYLMAALTVNEVIYPVPPSPAAIFLADSAAPL------GGHGSDEV--GGGGWXXXGCEQVGQASGGVVVPALPSAPLLVSCASRTTIVHNAEASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVSEDE 280
            R+RVPV EVA+YLM ALTVN+V+YP+PPSP+AIFLADSAA        GGHG DE     GG      +Q G A GGV VPALP APLLV+CASRTT+VHNA+ASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMV  +E
Sbjct:   11 RDRVPVCEVAQYLMGALTVNDVVYPIPPSPSAIFLADSAAATTATATAGGHGPDEAVPAVGGAAVGSEQQGGHACGGVTVPALPCAPLLVNCASRTTVVHNADASGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVRVEE 163          
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Match: D7FP07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP07_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 3.720e-33
Identity = 106/137 (77.37%), Postives = 112/137 (81.75%), Query Frame = 0
Query:    1 MRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPKALLANPSSLASLASGGSKTLLLQHQANAAXXXXXXXXXXXXXXXXXXXXXXXXXXX----DEPDLSRDDFESLGFLLTGGASLEAERAPGVTLAELCPLWSKDG 133
            MRLHTRTSD+AHRLGFVKRHLHE+LRLASSHP ALLA P+SLASLA                XXXXXXXXXXXXXXXXXXXXXXXXXXX    DEPDLSRD+FESLGFLLTGGASLEAERAPGV+LA+LCPLW   G
Sbjct:  229 MRLHTRTSDEAHRLGFVKRHLHELLRLASSHPAALLATPASLASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCPLWGDQG 365          
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.380e-23
Identity = 101/306 (33.01%), Postives = 144/306 (47.06%), Query Frame = 0
Query:    1 MRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPKALLANPSSLASLASGGSKTLLLQHQANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDDFESLGFLLTGGASLEAERAPGVTLAELCPLWSKDGRPRERVPV---SEVAEYLMAALTVNEVIYPVPP----SPAAIFLADSAAPLGGHGSDEVGGGGWXXXGCEQVGQASGG----------------------VVVPALPSAPLLVSCASRTTIVHNAEASGPL-RDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMV 276
            +RLH++ +D+AHRL F+KRHLH++LRL S         P++  +L++  +        A A                                ++R D  +LGFL+ GG +L+   A    L +LCPL    G    R PV   +EVA++L AALTVN+V+YP PP    +  A+ L   AA               XXX                                 V  PA    PL+V+ A+RTT++H A A     R LQV+ C ESYVY+L+  ++ATV+GC +CT+V+GAAAG+V
Sbjct:  147 LRLHSKGADEAHRLAFIKRHLHDLLRLVS---------PAAADALSAAAAXXXXXXXXAFA--------------------------------VARADLSALGFLIAGGRALDD--ASQRDLCDLCPL---AGGGATRGPVGSAAEVADWLAAALTVNDVLYPAPPPLPTAAPALPLESLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVKXXXXXXXXTTEPVRVAAPARAGVPLVVNGAARTTVMHAAAAGARAERSLQVSHCHESYVYMLAPFQYATVLGCSECTIVVGAAAGVV 406          
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Match: A0A835YHX7_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.480e-19
Identity = 84/232 (36.21%), Postives = 113/232 (48.71%), Query Frame = 0
Query:   95 SRDDFESLGFLLTGGASLEAERAPGV-TLAELCPLWSKDGRPRERVPV--------------------SEVAEYLMAALTVNEVIYPVPPSPAAIFLADSAAP---------------LGGHGS--DEVGGGGWXXXGCEQVGQASGGVVVP---ALPSA----PLLVSCASRTTIVHNAEA-SGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVSEDE 280
            +R D  SLGFL+ GG +L+    PG   LA+LC L                                  EV E++ AALTVN+V+YPVPPSPAA  LAD+ A                LG H +  D+    G    G     Q  G +  P   A P      PL+++ A +TTIVH A A +   R LQ+N C ESY+YVL+ +R AT++GC DCT+V+GA  G +  ++
Sbjct:  255 TRGDLSSLGFLIAGGHALDD---PGPWDLADLCALRHVQAGTAAAPXXXXXXXXXXXXXXXXXAAGSWGEVCEWVAAALTVNDVLYPVPPSPAAQALADAHAAXXXXXXXXLSVADAVLGTHAAFDDDFLSPGAPGGGA--AAQRKGSISKPLRLAEPDGGAALPLVINGAHKTTIVHAAAAGAAAARQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALRVED 481          
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Match: A0A7S3XVC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVC9_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 1.070e-13
Identity = 63/191 (32.98%), Postives = 91/191 (47.64%), Query Frame = 0
Query:   98 DFESLGFLLTGGASLEAERAPGVTLAELCPLWSKDGRPRERVPVSEVAEYLMAALTVNEVIYPVPPSPAAIFLADSAAPLGGHGSDEVGGGGWXXXGCEQVGQASGGVVVPALPSAPLLVSCASRTTIVHNAEA-----------SGPLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVS 277
            + + LGFL   GA+      P   L+EL       G       + EV E+LM  L++NEV+YP PP+P       +    GG          W     +    +     +   P APL+ +   RTT++H+ +            S  LR + VN C +SY+Y+L A + ATV+GC DCTVVIGA +GMV+
Sbjct:    3 ELDQLGFLF--GAARPGPGRPVPKLSELAGDLFSSGSSN----IYEVREWLMGVLSLNEVLYPPPPAPTGESFTAAGDGEGGVFEQP-----WQQEKAKAQALSKADEGIYPEP-APLVYNFVIRTTVMHDEDKKQDELGGEDSNSRQLRAVHVNHCHDSYIYLLGAFKSATVLGCTDCTVVIGAISGMVN 181          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9140.18169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FP08_ECTSI3.490e-6173.86C-CAP/cofactor C-like domain-containing protein n=... [more]
D7FP07_ECTSI3.720e-3377.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1R1_9STRA3.380e-2333.01Tubulin binding cofactor C-domain-containing prote... [more]
A0A835YHX7_9STRA4.480e-1936.21Tubulin binding cofactor C-domain-containing prote... [more]
A0A7S3XVC9_HETAK1.070e-1332.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039589TBCC domain-containing protein 1PANTHERPTHR16052UNCHARACTERIZEDcoord: 79..277
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 208..280
score: 10.584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9140contigL-elsbetiae_contig9140:673..7915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9140.18169.1mRNA_L-elsbetiae_contig9140.18169.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9140 673..7927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9140.18169.1 ID=prot_L-elsbetiae_contig9140.18169.1|Name=mRNA_L-elsbetiae_contig9140.18169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MRLHTRTSDDAHRLGFVKRHLHEMLRLASSHPKALLANPSSLASLASGGS
KTLLLQHQANAAAEAGAAALTGEGEGKASSAGGAGSEQEDEPDLSRDDFE
SLGFLLTGGASLEAERAPGVTLAELCPLWSKDGRPRERVPVSEVAEYLMA
ALTVNEVIYPVPPSPAAIFLADSAAPLGGHGSDEVGGGGWGGGGCEQVGQ
ASGGVVVPALPSAPLLVSCASRTTIVHNAEASGPLRDLQVNCCQESYVYV
LSAVRFATVMGCKDCTVVIGAAAGMVSEDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039589TBCC1
IPR017901C-CAP_CF_C-like