prot_L-elsbetiae_contig9136.18166.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9136.18166.1
Unique Nameprot_L-elsbetiae_contig9136.18166.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length388
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9136.18166.1 vs. uniprot
Match: D7FX81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX81_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 3.460e-6
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MGNMCTNAQGADDRRRKPDSRRKSSGSTTGFSPTEEIAY 39
            MGN+CT+ + A+D RR+PDSRRK SGSTTGFSPTE++ Y
Sbjct:    1 MGNLCTSTKSANDGRRQPDSRRKGSGSTTGFSPTEDLGY 39
[Close]
BLAST of mRNA_L-elsbetiae_contig9136.18166.1 vs. uniprot
Match: A0A6H5JVK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK9_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.470e-5
Identity = 26/39 (66.67%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MGNMCTNAQGADDRRRKPDSRRKSSGSTTGFSPTEEIAY 39
            MGN+CT+ + A+D RR+PDSRRK SGSTTGFSPTE++ +
Sbjct:    1 MGNLCTSTKSANDGRRQPDSRRKGSGSTTGFSPTEDLGH 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9136.18166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX81_ECTSI3.460e-669.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVK9_9PHAE4.470e-566.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9136contigL-elsbetiae_contig9136:6396..7559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9136.18166.1mRNA_L-elsbetiae_contig9136.18166.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9136 6261..7559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9136.18166.1 ID=prot_L-elsbetiae_contig9136.18166.1|Name=mRNA_L-elsbetiae_contig9136.18166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp
MGNMCTNAQGADDRRRKPDSRRKSSGSTTGFSPTEEIAYAAAGEQNGAAA
EGAPSSAPANGVRTGPVSASEVDVHTGGDPSRDKRDGGAYANGDPPLNTS
RRGSATSALAAPGAAAAAEVAAATDVGDVLGSPSRGAGDAGGGDRESRRR
RDSTRSSKDGGGGGGGEERRRSSRRSKSSRKDKDGASVGNGGESRSSRGR
ENGGSSRRRDSESGRRPRTERTEKEIAERKEQRRRERAARSSANGGDPEA
EEARRERRERRERRKRKEAEAAEAAAEEEAAASGGGVNGGVPEGGAEPAA
AAAEAAAVEGDEDASGAAAGVLEGSNDSGKDGRKGSGRRSGDTRYSASGG
GSRERGSTGVSGVMAGSGGSAAAADHGEKKKRSSSLRK
back to top