prot_L-elsbetiae_contig9134.18164.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9134.18164.1
Unique Nameprot_L-elsbetiae_contig9134.18164.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length222
Homology
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BLAST of mRNA_L-elsbetiae_contig9134.18164.1 vs. uniprot
Match: D8LSS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS0_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 7.800e-79
Identity = 135/215 (62.79%), Postives = 155/215 (72.09%), Query Frame = 0 
Query:    8 MIEGQAGGSLEAAAAGEEDESGALLPSSPAPLHRGRIA-LFAGMLAVALLVGYVSSPRASVRGTAGTAAAAAASPIQASTNSIPSCSLMSCTGSGCDWDGAPFLCLEGGSSNGCADKASTWSEGDSCTSFCDLSGCADTLEKAGADGGEDLPRRCLDCDEKQCSKLAEQWSQACGKAAPFMCLSGAATWGCADNELAWASAPATTCGECCDVGGC 221
            MI+  AG     AAA E  E G+L+  +  P  +G +    A  + VALL+    S   +    +  AA AAA+P+QAST+S+PSCSL+SCT SGCDWDGAPFLCL+GGS+ GCAD ASTWS GD CTSFCDLSGCADTLE  G D   DLPRRCL+CDE QCS LA   SQACG   PF+CLSGAATWGCADNELAWAS P+TTCGECCDV GC
Sbjct:    1 MIQAGAG-----AAALERGEEGSLIAGTE-PRRKGWVVPALAAAVGVALLLACGLSAHHAREDAS--AAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTWSGGDGCTSFCDLSGCADTLENTGVD---DLPRRCLECDETQCSNLAGHPSQACGSTVPFVCLSGAATWGCADNELAWASTPSTTCGECCDVSGC 204
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9134.18164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSS0_ECTSI7.800e-7962.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9134contigL-elsbetiae_contig9134:3095..6662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9134.18164.1mRNA_L-elsbetiae_contig9134.18164.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9134 3071..7186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9134.18164.1 ID=prot_L-elsbetiae_contig9134.18164.1|Name=mRNA_L-elsbetiae_contig9134.18164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
MTKQTYEMIEGQAGGSLEAAAAGEEDESGALLPSSPAPLHRGRIALFAGM
LAVALLVGYVSSPRASVRGTAGTAAAAAASPIQASTNSIPSCSLMSCTGS
GCDWDGAPFLCLEGGSSNGCADKASTWSEGDSCTSFCDLSGCADTLEKAG
ADGGEDLPRRCLDCDEKQCSKLAEQWSQACGKAAPFMCLSGAATWGCADN
ELAWASAPATTCGECCDVGGC*
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