prot_L-elsbetiae_contig9130.18159.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9130.18159.1
Unique Nameprot_L-elsbetiae_contig9130.18159.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length337
Homology
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 5.210e-99
Identity = 209/356 (58.71%), Postives = 238/356 (66.85%), Query Frame = 0
Query:    1 MSNFDDGMFDFGDDDDADSFLTGKLAALGIDEDLELSGGEEENEDPAGGGTSPADLSSAPAAEVVSSP-------APGRVPTEDRGQPPAATEAQGEAP-QPVSPA-------------VRSSAGXXXXXXXXEEGSGEAIEEGELLEMLKKPLQASRGRPQQHGSRDNSRSGRIDGSGGXXXXXXXXXXXXXXXXXSNGRAHGRNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANKRKAEAALAGEDVMTPRDPPRXXXXXXXXXXXXXSARAARDMGTWVGPGA 335
            MS FDD   DFG DDD D FLTGKLAALGIDEDLELSGGEEE+++ A      AD S+ P   V  SP       A   VP   R   PA  +  G  P +  SP               R +            G G A+E+GEL++M+ +PL+ SRGR Q        RS R  G GG XXXXXXXX         +G+A GRNVTI ECA W+C+RL EPKYYLMCQVVSTIGY K+R LLE VQ+TQ+ GGMPTADGSRKRTAGGVFFTLLK+HMEP++LKELYADE+RVKKE+DRARR+ANKRKAEAALAGEDVMTPR+PPR  XXXXXXXXX  + RA RDMG W GP A
Sbjct:    1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSNKPPGIVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGRGTAVEDGELVQMIDQPLRTSRGREQ--------RSARDSGRGGGXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXXX--ATRAGRDMGKWAGPTA 346          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A835ZKK4_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKK4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.900e-21
Identity = 49/100 (49.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  187 TISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANK 286
            T+ + AI +C++LDEPKYYLMCQVV  +G+ K+  LL++  Q +  GG+ TADG R+R+ GGVF TLL++ + P K+K +YA++ RV+K R R  R+  K
Sbjct:  165 TVKDAAIRLCEQLDEPKYYLMCQVVWHLGFNKTNRLLKQTVQIERDGGLRTADGKRRRSPGGVFLTLLRDAVTPEKMKAIYAEDKRVQKLRARTVRAMRK 264          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.260e-13
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 0
Query:  199 LDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELY-ADEIRVKKERDRARRSANKRKAEAALAGEDV 298
            LDE    L+ + +  IG K ++ LL+RV +TQ  GG+ TADGSRKRT GGVFF LL++ M P   K+L  AD  R K+E +  R+   KR  E    G D 
Sbjct:   95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRDGGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDA 195          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT)

HSP 1 Score: 70.1 bits (170), Expect = 6.550e-10
Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  195 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKE--HMEPAKLKELYADEIRVKKERDRARRSA-NKRK 288
            + +RL+E K+ L+ + V  IG KK+  L    +Q Q  GGM T +GSR+RT+GGVF TLLK   +    ++KE++ D++ +KKE  + +++A N+RK
Sbjct:  166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLNGGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKEALKRKKAAYNQRK 262          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A9TJL2_PHYPA (Phosphorylated adapter RNA export protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TJL2_PHYPA)

HSP 1 Score: 69.7 bits (169), Expect = 1.300e-9
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  184 RNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRAR 281
            + V I    +  C R++E KY L  + V  IG +  +GLL +V   Q  GG  TADG R+R+AGGV + LL++H+ P   KE+  +  R   E+ +A+
Sbjct:  113 KTVIIERFVVQTCRRIEETKYPLFREAVDRIGIEAMKGLLNQVDAIQKCGGQMTADGLRRRSAGGVLWNLLRDHVGPVLYKEIMKEGNRKHIEQQKAK 210          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 67.4 bits (163), Expect = 5.990e-9
Identity = 35/84 (41.67%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  195 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKE--HMEPAKLKELYADEIRVKKE 276
            + +RL+E K+ L+ + V  IG KK   L +  ++ Q +GGM T +GSR+RT+GGVFFTLLK   +    ++KE++ +++ +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQLSGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: Q017X4_OSTTA (Phosphorylated adapter RNA export protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q017X4_OSTTA)

HSP 1 Score: 65.9 bits (159), Expect = 1.480e-8
Identity = 39/120 (32.50%), Postives = 63/120 (52.50%), Query Frame = 0
Query:  184 RNVTISECAIWMCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHMEPAKLKELYADEIRVKKERDRARRSANKRKAEAALAGEDVMTPRD 303
            R    S  A  +   LDEPK  L+ + +  +G    R   E    TQ  GG  TA+G RKRT GG+F+++++  ++     E++A+E   +KER +ARR+  +     A  G++ + P D
Sbjct:   94 RGADASRSARELAQALDEPKVRLLARAIDALGESTCRAYAEEAVATQRNGGELTANGERKRTTGGIFWSIVRARVDKETYDEIFAEERERQKERVKARRARQR-----AADGKENVPPAD 208          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 63.9 bits (154), Expect = 5.250e-8
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  195 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLK 255
            + +RL EPK +L+ +VV  +G  ++R LL   +  + AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  134 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 194          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A293M5C7_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M5C7_ORNER)

HSP 1 Score: 63.9 bits (154), Expect = 9.510e-8
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  195 MCDRLDEPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLK 255
            + +RL EPK +L+ +VV  +G  ++R LL   +  + AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  223 IAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 283          
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Match: A0A426U3M5_9CHLR (Phosphorylated adapter RNA export protein n=1 Tax=Candidatus Viridilinea halotolerans TaxID=2491704 RepID=A0A426U3M5_9CHLR)

HSP 1 Score: 63.5 bits (153), Expect = 1.350e-7
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 0
Query:  180 RAHGRNVTISECAIWMCDRLDEP---KYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVFFTLLKEHM 258
            R HG   T    A  + DRLDE    +  ++ ++V+ IG K++  +L+   Q +  GGMPT DG+R+RT GG+FF L+KE +
Sbjct:  119 RRHGSTFTPDFIAAMIADRLDETEGERSLVVWRIVAHIGVKRAWAVLKETLQIEAQGGMPTEDGTRQRTLGGIFFFLIKEQI 200          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9130.18159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ0_ECTSI5.210e-9958.71Phosphorylated adapter RNA export protein n=2 Tax=... [more]
A0A835ZKK4_9STRA9.900e-2149.00Phosphorylated adapter RNA export protein n=1 Tax=... [more]
A0A8J2X059_9STRA5.260e-1345.54Phosphorylated adapter RNA export protein n=1 Tax=... [more]
A0A7D9EF16_PARCT6.550e-1041.24Phosphorylated adapter RNA export protein n=1 Tax=... [more]
A9TJL2_PHYPA1.300e-937.76Phosphorylated adapter RNA export protein n=1 Tax=... [more]
UPI001069D6615.990e-941.67uncharacterized protein LOC114518314 n=1 Tax=Dendr... [more]
Q017X4_OSTTA1.480e-832.50Phosphorylated adapter RNA export protein n=2 Tax=... [more]
A0A293N1Q8_ORNER5.250e-850.82Phosphorylated adapter RNA export protein (Fragmen... [more]
A0A293M5C7_ORNER9.510e-850.82Phosphorylated adapter RNA export protein (Fragmen... [more]
A0A426U3M5_9CHLR1.350e-740.24Phosphorylated adapter RNA export protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038092Phosphorylated adapter RNA export protein, RNA-binding domain superfamilyGENE3D1.10.10.1440coord: 185..283
e-value: 3.1E-22
score: 80.4
IPR019385Phosphorylated adapter RNA export protein, RNA-binding domainPFAMPF10258RNA_GG_bindcoord: 195..270
e-value: 1.0E-22
score: 79.9
IPR039047Phosphorylated adapter RNA export proteinPANTHERPTHR13135CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26coord: 138..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9130contigL-elsbetiae_contig9130:1118..3127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9130.18159.1mRNA_L-elsbetiae_contig9130.18159.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9130 1080..3698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9130.18159.1 ID=prot_L-elsbetiae_contig9130.18159.1|Name=mRNA_L-elsbetiae_contig9130.18159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=337bp
MSNFDDGMFDFGDDDDADSFLTGKLAALGIDEDLELSGGEEENEDPAGGG
TSPADLSSAPAAEVVSSPAPGRVPTEDRGQPPAATEAQGEAPQPVSPAVR
SSAGGGGGGGGGEEGSGEAIEEGELLEMLKKPLQASRGRPQQHGSRDNSR
SGRIDGSGGGAGRKGGGGGAGRGRAKSNGRAHGRNVTISECAIWMCDRLD
EPKYYLMCQVVSTIGYKKSRGLLERVQQTQDAGGMPTADGSRKRTAGGVF
FTLLKEHMEPAKLKELYADEIRVKKERDRARRSANKRKAEAALAGEDVMT
PRDPPRQRRRESGGGGGGGSARAARDMGTWVGPGAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038092PHAX_RNA-binding_sf
IPR019385PHAX_RNA-binding_domain
IPR039047PHAX