prot_L-elsbetiae_contig913.18158.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig913.18158.1
Unique Nameprot_L-elsbetiae_contig913.18158.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length928
Homology
BLAST of mRNA_L-elsbetiae_contig913.18158.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 3.320e-130
Identity = 368/754 (48.81%), Postives = 442/754 (58.62%), Query Frame = 0
Query:   87 AGSKGRVLQAAGDDERFTYATRTQFHLCAALPGSVITEGALRAGIVDAFGVEEVQTEGIVGVVERRDSSELCSNSGASEEWMVAIGNEDAEDQSAAAISANQMELVRSLNFTTDLAASLNSNPDFPATDVTAAGLTFNSLGYIVLYDEEQEVAPASTRDT-SDFVPFRGPDQWWPXXXXXLFGLAFLCCICPLAACIWHFRPGHSGPPSPSGAGGGPGMFGKXXXXXXXXXXKAVGGGD---DPDWDMMKQYKKGAVG---GDKDEGVFNDAATGISADSPSEYVNPMSVYTGGDS-TGAEGSVGREKTSGEWPEALMESGVGVTGVDYTS--QGASSAKHTQQGDEASVL--SEADRAAGSDPGRYEHDP--AAVSVNPLVTSASFNPTASSSRVAGGAGGAMGASDSTSSFGGSNSAMDSAPPGSDASW--AHKASLAGXXXXXXXXXXXXXXXXXXXXX-GPSGRTLGNAAAALGEEDGGGGSDFGGT------------QSALSYRT-DDSAGARSTSTLAALEAKAEAEAYEAELADHAESGXXXXXXXXXXXXXA--------------GLPPSGRSSGALRSSDANPQDPASSGTSTTRSRAGSGSSAGGVDEL--REFTDQDRQQRMEESDAARAASLLRGSSFKVPLQPDLERAITEQEQERRRAAVQAVEASRGPIAADTTEESADTG------AGAAXXXXXXXXXXXXXXXXXXXXGATPPQS-LMGKVVVGMGMG--RFFG 785
            AG + R +    D + FTY +RTQF LCAA PGS + E ALRAGI+D F VE+ QTEG  G VE+R+ +E C +   SEEW +AIGNE ++ QSAA ISA QMELVRS  FTT LA+SL  +       V  AGLT++SLGYIVLYDE+Q V  A++    SDFV FRGPDQWWP XXX LFGL  LCCICPLAACI+++RPG +GPPSPSGAGGGPGMFG           K +G G    + DW + +QY+        GDKD   FNDAATGIS  SP E V   +  +GGDS T  + +   +  SGEWPEA+ ESGVG TGV YTS  +G +S+  +QQGDEA+ +  +EADRAAG DP R EHD   +A+S+ PLVTS SFNP AS S      GG MG  DS +S       ++S+    +ASW  + K    G                      GPSGRTLG+AAAALGEED     +  G+            QSA+SYRT D SA  +STSTLA L+AK E               XXXXXXXXXXXXX               GLPPSGRSS    S   +   PAS      RSRA S SS+   DEL  R+ T+++ Q R+E+++AARAAS+LRGSSFK PLQPDLERAI  +EQERRR AVQAVEAS  P +     E  D G      A A                      ++P  +  MGKVV GMGMG  R FG
Sbjct:  191 AGWRSRRVLQTDDGDSFTYTSRTQFDLCAA-PGSELEEDALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDD--GSEEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLASSLEDSN----LSVNPAGLTYSSLGYIVLYDEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYRPGLAGPPSPSGAGGGPGMFG---GSTRGGTRKEIGRGXXXXNADW-ITQQYEXXXXXXGYGDKD---FNDAATGISVYSPQEEV--ATSASGGDSATVVQAAESPQVASGEWPEAI-ESGVGTTGVTYTSTSRGGASSVASQQGDEATAVQSAEADRAAGVDPSRREHDTTTSALSIKPLVTSGSFNPAASGSGDGRVPGGYMG--DSAAS-------LESSQKSREASWGVSRKTVTPGDSGLLEATEEADEGDSPAPLISGPSGRTLGSAAAALGEEDSQDEDERIGSXXXXXXXXXXXXQSAVSYRTADGSASVQSTSTLAPLDAKTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGLPPSGRSSSNSSSRIQSVDHPAS---RAVRSRAASNSSS--ADELSQRDLTEEEHQMRVEDAEAARAASVLRGSSFKTPLQPDLERAIAVEEQERRRQAVQAVEASLAPDSGTGAAEPVDLGSPADLPAEAVTAAIAASATGDTEKEGGASVSSSPAATGFMGKVVAGMGMGMSRIFG 913          
BLAST of mRNA_L-elsbetiae_contig913.18158.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 1.290e-107
Identity = 359/854 (42.04%), Postives = 428/854 (50.12%), Query Frame = 0
Query:   14 VVLPTRLAYEVLVVRP------------------PAASGGGVGAA-AVSLNLRTGLEGRHGGRR-LGDSQGSGIWAGEREREGEREDG-EGL---RAAGSKGRVLQAAGDDERFTYATRTQFHLCAALPGSVITEGALRAGIVDAFGVEEVQTEGIVGVVERRDSSELCSNSGASEEWMVAIGNEDAEDQSAAAISANQMELVRSLNFTTDLAASLNSNPDFPATDVTAAGLTFNSLGYIVLYDEEQEVAPASTRDT-SDFVPFRGPDQWWPXXXXXLFGLAFLCCICPLAACIWHFRPGHSGPPSPSGAGGGPGMFGKXXXXXXXXXXKAVGGGDDPDWDMMKQYKKGAVG---GDKDEGVFNDAATGISADSPSEYVNPMSVYTGGDS-TGAEGSVGREKTSGEWPEALMESGVGVTGVDYTS--QGASSAKHTQQGDEASVL--SEADRAAGSDPGRYEHDPA--AVSVNPLVTSASFNPTASSS---RVAGGAGGAMGASDSTSSFGGSNSAMDSAPPGSDASW--AHKASLAGXXXXXXXXXXXXXXXXXXXXX-GPSGRTLGNAAAALGEEDG-------GGGSDFGGTQSALSYRTDDSAGARSTSTLAALEAKAEAEAYEAELADHA--------------------------ESGXXXXXXXXXXXXXAGLPPSGRSSGALRSSDANPQDPASSGTSTTRSRAGSGSSAGGVDEL--REFTDQDRQQRMEESDAARAASLLRGSSFKVPLQPDLERAITEQEQERRRAAVQAVEASRGPIAADTTEESADTGAGA---AXXXXXXXXXXXXXXXXXXXXGATPPQ----SLMGKVVVGMGMGRFF 784
            VVLPTR+AYEVL+  P                  P+A+G     A + S  L     G  GGRR L D            R+G   DG +GL   + AG +GR +    D   FTY TRTQF LCAA PGS + E ALRAGI+D F VE+ QTEG  G VE+R+  E C +   SEEW +AIGNE ++ QSAA ISA QMELVRS  FTT LAASL  +       V  AGLT++SLGYIVLYDEEQ V  A++    SDFV FRGPDQWWP                           GH+GPPSPSGAGGGPGMFG              GGG + DW + +QY+KG      GDKD   FNDAATGIS  SP + V   +  +G DS T  + +   E  SGEWPEA MESGVG+TGV YTS  +G +S   +QQGDEA+ +  +EADRAAG DP R EHD +  A+S+NPLVTS SFNP AS S   RV GG              G S ++++S+   S+ASW  + K    G                      GPSGRTLG+AAAALG ED        G GS  G                                                                    +      XXXXXX    GLPPSGRSS    S   +   PAS      RSRA S SS+   DEL  R+ T+++RQ R+E+S+AARAAS+LRGSSFK PL PDLE AI  ++Q+RRR AVQ +EASR P +     E  D G+ A   A                     A  P       MGKVV GMGM RFF
Sbjct:    2 VVLPTRVAYEVLLQPPVFESHRGEPPPPLVSLAVPSATGSAASTAGSASRTLVKEGTGEGGGRRRLSDFS----------RDGGGSDGSDGLILSKKAGWRGRRVLQTDDSGSFTYTTRTQFDLCAA-PGSELEEDALRAGIMDVFEVEQEQTEGTAGTVEKREVMEFCDD--GSEEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLAASLEDSN----LTVDPAGLTYSSLGYIVLYDEEQAVTAANSDSLDSDFVAFRGPDQWWP---------------------------GHAGPPSPSGAGGGPGMFGGSTRGGTGKEVGKGGGGGNADW-IAQQYEKGXXXXGYGDKD---FNDAATGISVYSPRDEV--ATSGSGVDSATVVQAAESPELASGEWPEA-MESGVGMTGVTYTSNSRGGASTVASQQGDEATAVQSAEADRAAGVDPSRREHDTSTSAISMNPLVTSDSFNPAASGSGDGRVPGGY------------IGDSAASLESSRKSSEASWGASRKTVTPGDSGLLETTEEAEEGESPAPLISGPSGRTLGSAAAALGGEDSQDEDGRIGSGSAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGPAAVVXXXXXXTAVPGLPPSGRSSSNSSSRIQSVDYPAS---RVARSRAASNSSS--ADELSQRDLTEEERQMRVEDSEAARAASVLRGSSFKTPLHPDLEHAIAVEQQDRRRQAVQGLEASRAPDSGTGAAEPVDLGSPADLPAEVVAAAITAAAAGDAEKEGEAAASPSPAATGFMGKVVAGMGMSRFF 787          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig913.18158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL50_9PHAE3.320e-13048.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU95_ECTSI1.290e-10742.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 582..602
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 286..927
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig913contigL-elsbetiae_contig913:15405..29003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig913.18158.1mRNA_L-elsbetiae_contig913.18158.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig913 15364..30766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig913.18158.1 ID=prot_L-elsbetiae_contig913.18158.1|Name=mRNA_L-elsbetiae_contig913.18158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=928bp
MFLAQAVLSFVGVVVLPTRLAYEVLVVRPPAASGGGVGAAAVSLNLRTGL
EGRHGGRRLGDSQGSGIWAGEREREGEREDGEGLRAAGSKGRVLQAAGDD
ERFTYATRTQFHLCAALPGSVITEGALRAGIVDAFGVEEVQTEGIVGVVE
RRDSSELCSNSGASEEWMVAIGNEDAEDQSAAAISANQMELVRSLNFTTD
LAASLNSNPDFPATDVTAAGLTFNSLGYIVLYDEEQEVAPASTRDTSDFV
PFRGPDQWWPWWAWLLFGLAFLCCICPLAACIWHFRPGHSGPPSPSGAGG
GPGMFGKGKGGGKGDGGKAVGGGDDPDWDMMKQYKKGAVGGDKDEGVFND
AATGISADSPSEYVNPMSVYTGGDSTGAEGSVGREKTSGEWPEALMESGV
GVTGVDYTSQGASSAKHTQQGDEASVLSEADRAAGSDPGRYEHDPAAVSV
NPLVTSASFNPTASSSRVAGGAGGAMGASDSTSSFGGSNSAMDSAPPGSD
ASWAHKASLAGGAVLAAGAGAAASSGGAPMPGGPSGRTLGNAAAALGEED
GGGGSDFGGTQSALSYRTDDSAGARSTSTLAALEAKAEAEAYEAELADHA
ESGGRGGGSGVTAATAAGLPPSGRSSGALRSSDANPQDPASSGTSTTRSR
AGSGSSAGGVDELREFTDQDRQQRMEESDAARAASLLRGSSFKVPLQPDL
ERAITEQEQERRRAAVQAVEASRGPIAADTTEESADTGAGAAAAATAAAA
VAPSPAMAPSPAGATPPQSLMGKVVVGMGMGRFFGLDASVGDGAKEGRAE
PTADADSKSGPAGGDAAAAAAARALRPRPLLLLLLPLPARPCRTRRRVPD
MLFPSPERWPPPGRRLPLAGSRRPAPLRRSRPGRRSLPTRSLWSTVASAR
SRPGPTPTTSTARWGNFRRRKATTPCP*
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