|
Homology
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI) HSP 1 Score: 529 bits (1363), Expect = 2.510e-166 Identity = 327/466 (70.17%), Postives = 349/466 (74.89%), Query Frame = 1
Query: 58 MSSSADGPLRKGRRRGGGRDEEAIAGAAPETVVLVLGNFQGVVVLDMGLVAVGEGKTATLKIEAPDGARKPVTRVGVDPRHPLAGGLEV-NFDGELSLARGESHEAEVTWRPECGGKLRTNVSFKVDGRFPAQVSVVGEAVDPAAAGKERS-DARKGRKRVKGQ-SAGSDGGRRRSLSQDTALGGAGPYASMYGKENRLSLSSTALPPAASVLGSSSAS-VAALSQGTAN-KRQQMLKYSKSRRLSLKPAAHGKRGKSESATTGAGGGGVGGSKATLLRKSLSDKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSPLKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPMP----PVAAGXXXXXXXXXXXXXAKSGGRVDRALRTFVAE 1428
MSSSA+G L GR RGGG+ PET VLVLGNFQG VVLDMGLV VGEGK ATL+IE P+GARK VT +G DPRHPL+GGLEV +FDGELSL RGE E V WRPE GK R N++FKVDGRFPAQVSVVGE VD GK R DAR+GRKRV+G G+ GR SLSQ+ A GAGP+ SMYGKENRLSLSSTALPPAASVLG S S AAL TAN KRQQMLKYSKSRRLSLKP KR KS+ SKATLLRKSLSDKGWAEKQTAGFT+WLNFTLVGAEQLRHG GE G LTAE+GGVSSSPLKAMV MR EARQRMRAM LFRS EVR ATEAVADRA+DGT+SLRRDRVLHADVGLSGAL+DLVLCYEPRWL+LGLETVFGEIVPMP P AA K+GGRVDRALRTFVAE
Sbjct: 1 MSSSAEGRLGDGRGRGGGQ--------VPETAVLVLGNFQGAVVLDMGLVTVGEGKGATLRIEVPEGARKAVTTIGFDPRHPLSGGLEVADFDGELSLGRGEYREVHVAWRPERVGKFRGNLAFKVDGRFPAQVSVVGETVDVGGGGKRRKGDAREGRKRVRGGLPVGARAGR--SLSQEAASRGAGPHTSMYGKENRLSLSSTALPPAASVLGPSPDSFAAALCPRTANNKRQQMLKYSKSRRLSLKPGH--KREKSDGXXXXXXXXXXXXSKATLLRKSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGAGDDGEEED-----GGLTAEIGGVSSSPLKAMVAMRHEARQRMRAMRLFRSVEVRTATEAVADRAYDGTISLRRDRVLHADVGLSGALIDLVLCYEPRWLLLGLETVFGEIVPMPAGGVPAAA-------------RTKAGGRVDRALRTFVAE 436
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE) HSP 1 Score: 363 bits (932), Expect = 2.650e-108 Identity = 240/415 (57.83%), Postives = 257/415 (61.93%), Query Frame = 1
Query: 211 VGEGKTATLKIEAPDGARKPVTRVGVDPRHPLAGGLEV-NFDGELSLARGESHEAEVTWRPECGGKLRTNVSFKVDGRFPAQVSVVGEAVDPAAAGKERSDARKGRKRVKGQSAGSDGGRRRSLSQDTALGGAGPYASMYGKENRLSLSSTALPPAASVLGSS-SASVAALSQGTAN-KRQQMLKYSKSRRLSLKPAAHGKRGKSESATTGAGGGGV--GGSKATLLRKSLSDKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSPLKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPMP----PVAAGXXXXXXXXXXXXXAKSGGRVDRALRTFVAE 1428
VGEGK ATL+IE P+G RK VT +G DPRHPL GGLEV +FDGELSL RGE MYGKENRLSLSSTALPP ASVLG + +S AAL TAN KRQQMLKYSKSRRL+LKP KRGK S + G G GGSKATLLRKSLSDKGWAEKQTAGFT+WLNFTLVGAEQLRHG GE G +TAE+GGVSSSPLKAMV MR EARQR+RAM LFRS EVR ATEAVADRA+DGT+SLRRDRVLHADVGLSGAL+DLVLCYEPRWL+LGLETVFGEIVPMP P AA K+GGRVDRALRTFVAE
Sbjct: 16 VGEGKGATLRIEVPEGTRKAVTTIGFDPRHPLCGGLEVADFDGELSLERGE---------------------------------------------------------------------------------------MYGKENRLSLSSTALPPGASVLGPAPDSSAAALCPRTANNKRQQMLKYSKSRRLALKPGH--KRGKVGSCSDGGASAGEEGGGSKATLLRKSLSDKGWAEKQTAGFTNWLNFTLVGAEQLRHGAGDDGEEED-----GGVTAEIGGVSSSPLKAMVAMRHEARQRVRAMRLFRSVEVRTATEAVADRAYDGTISLRRDRVLHADVGLSGALIDLVLCYEPRWLLLGLETVFGEIVPMPAGGVPAAA-------------RTKAGGRVDRALRTFVAE 323
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.310e-28 Identity = 138/450 (30.67%), Postives = 185/450 (41.11%), Query Frame = 1
Query: 133 GAAPETVVLVLGNFQGVVVLDMGLVAVGEGKTATLKIEAPDGARKPVTR-VGVDPRHPLAGGLEV-NFDGE-LSLARGESHEAEVTWRPECGGKLRTNVSFKVDGRFPAQVSVVGEAVDPAAAGKERSDARKGRKRVKGQSAGSDGGRRRSLSQDTALGGAGPYASMYGKENRLSLSSTALPPAASVLGSSSA--SVAALSQGTANKRQQMLKYSKSRRLSLKP---AAHGKRGKSESATT-------------------------------------GAGGGGVGGSKATLLRKSLSDKGWAEKQTAGFTDWLNFTLVGAEQ---LRHGGDGGGEXXXXXXXXGRLTAEVGGVSS-----SPLKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPMP 1323
G E LV+ F +D+G V VG ++ L IE P +P +R V V LE+ F E L L RGE ++ WRP GK + F++DG + Q+ V+GEA+ + R G PYA YG + A +LG A AA + A +RQ ML++S++ +L+P G G+S S +T ++ L RKS D+ WA+KQ FT WLNF LV Q G DG TA GG S SP K ++ +R +A+ R RA LL E+ +AD+ +GTL+LR DRVLHADVGLS A+ L+LCY P WL LGLETV G + MP
Sbjct: 92 GGKGEMATLVMNPFLNSEPVDLGSVRVGLVRSLPLCIELPPDGSQPSSRLVLVRSSSQQTSQLEIPEFSEESLVLQRGEHLMTQLRWRPTAPGKFAATLQFRMDGIYHLQLKVLGEALPKPTKRRSRF-------------------------------GMTPYA--YGGDPS---------DAVVILGKRCAPEDEAADKENAAARRQHMLQWSRATTHTLRPHKGTTTGGTGRSRSGSTLDQKRLAAAXXXXXXXXXXXXQLQLSQPVRXXXXXXXXXXXXXXXXAEEALARKSRQDQQWADKQAQSFTAWLNFVLVPDAQEWQASQGADG--------------TASTGGSVSTAGARSPFKEVLAVRGQAQARYRAALLHHGTELTAIRSTIADKVAEGTLALRGDRVLHADVGLSHAMAVLLLCYNPCWLRLGLETVTGSEINMP 485
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: UPI001E1D2B2A (LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2B2A) HSP 1 Score: 92.4 bits (228), Expect = 5.700e-16 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 877 RKSLSDKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEV--GGVSSSPLKAMVTMRREA------RQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPM 1320
R D+ W EKQ GF +WLNF L E+ + G G+LT ++ G +P +++ R + R R A LF+S VR + V + + L +R+D++LHADVG +LD++L Y P WL +GLET++GE+VP+
Sbjct: 1211 RNMFYDERWMEKQERGFVNWLNFILTPPEEHQ------GSDVKVKVDAGKLTLDIEKGRTRLAPTNEILSFRTYSAHRKLNRLRKSACRLFQSESVRRVIQKVEEEVENKRLLVRKDKMLHADVGAKQKVLDMLLSYNPLWLRMGLETIYGEVVPL 1360
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: A0A7S2KPU1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPU1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.450e-14 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 1
Query: 892 DKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSPLKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVP 1317
D+ WA+KQ F WLNFT + L E G + A+ +S + ++ R +AR R +A+ L+ S +++ +V + G LS+R DR L+AD+ L G L+ L+L Y WL LGLET+FGEI+P
Sbjct: 511 DENWAQKQCEAFGHWLNFTFNPTDDLAV------ENDAAVAGVGTVVADT--TRASAHRDLLFHREKARARNQAIHLYNSGDIKSIRLSVEEEISSGKLSIRSDRDLYADLSLRGQLIKLILSYSGPWLRLGLETIFGEILP 644
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: A0A1S3KBD7_LINUN (abnormal spindle-like microcephaly-associated protein homolog n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KBD7_LINUN) HSP 1 Score: 84.3 bits (207), Expect = 2.160e-13 Identity = 52/149 (34.90%), Postives = 74/149 (49.66%), Query Frame = 1
Query: 892 DKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSPLKAMVTMR------REARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPM 1320
D+ W EKQ GF WLNF L E + G G+ V +P K ++++R R R R A LLF+S + G L++R+DR LHAD+G+ +LD++L Y P WL +GLET +GEI+P+
Sbjct: 1067 DERWIEKQEKGFERWLNFILTPEEDV-----GDGKKPAKVDAGSLCVTSVTVNKLAPTKEVLSLRAYSARRRLNRLRRTACLLFQSETFVMGVRKIEVEIETGHLAVRKDRKLHADLGIKQVVLDMILSYNPLWLRIGLETTYGEILPL 1210
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: V4BV55_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BV55_LOTGI) HSP 1 Score: 84.3 bits (207), Expect = 2.170e-13 Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 877 RKSLSDKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSPLKAMVTMRR-EARQRMRAML-----LFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIV 1314
R D+ W EKQ GF+ WLNF L E+ + + G + G +P K ++++R AR+RM + L++S V V L++R+DR+LHAD+G+ ++LD++LCY P WL +GLET+FGE++
Sbjct: 1140 RNMYYDERWLEKQERGFSHWLNFILTPPEEYNNNVEKTKVDAGSIFVDGMKGS--GNTRLAPTKEVLSIRAYTARRRMNRLRRASCQLYQSESVIHVIRKVEIEVESRRLAVRKDRMLHADLGIKQSILDMLLCYNPLWLRIGLETIFGEMI 1289
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: UPI001B88A250 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A250) HSP 1 Score: 84.3 bits (207), Expect = 2.170e-13 Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 1
Query: 892 DKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEV---GGVSSSPLKAMVTMRREA------RQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPM 1320
D+ W +KQ GF WLNF L +++ + G L + G + +P K +++ R A R R A L++S +V + L++R+DR+LHAD+G+ +LD++LCY P WL +GLETVFGEI+P+
Sbjct: 1198 DERWKDKQDRGFVKWLNFILTPSDEYNYA------VNKTKVDVGSLCVDGNKDGVCNRAPTKEVLSFRAYAARRRLNRLRRAACRLYQSEQVIPVIIKIEAEVEKLGLAVRKDRMLHADIGIKQRILDMLLCYNPLWLRIGLETVFGEILPL 1343
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: UPI00201F063A (abnormal spindle-like microcephaly-associated protein homolog isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F063A) HSP 1 Score: 82.8 bits (203), Expect = 6.790e-13 Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 892 DKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVG-GVSSSPLKAMVTMR------REARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPM 1320
D+ W EKQ GF WLNF L ++ + G L ++ +P K ++++R R R R A L++S + + +S+RRDR++HAD+G+ +LD++LCY P WL +GLETV+GE++P+
Sbjct: 1591 DERWMEKQDRGFVHWLNFVLTPPDEYNY------VVNKIRVDAGTLNTDIKTSACLAPTKEVLSIRAYTARRRLNRLRRAACQLYQSEKTVSVILKLEYEVEKKRISVRRDRMVHADIGIKQRILDMLLCYNPLWLRVGLETVYGEVLPL 1734
BLAST of mRNA_L-elsbetiae_contig9125.18154.1 vs. uniprot
Match: UPI00109BA7E8 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA7E8) HSP 1 Score: 82.0 bits (201), Expect = 1.160e-12 Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 1
Query: 892 DKGWAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEXXXXXXXXGRLTAEVGGVSSSP---------LKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRRDRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPM 1320
D+ W EKQ GF WLNF L + E X G LT + S P LKA T R+ AR R A LL++S V + G L++R DR +HAD+G+ ++ ++L Y P WL +GLETV+GEI+P+
Sbjct: 533 DERWIEKQEEGFKRWLNFILTPPD----------ECDVXETNPGLLT--MSSTKSQPKAPSKEDLSLKAYTTRRKMARLRRCACLLYQSEPVICVIRKIEAEVELGRLAIRPDRKIHADLGIKKNIVKMILSYNPLWLRIGLETVYGEILPV 672
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 535.4 |
Seed ortholog evalue | 2.7e-149 |
Seed eggNOG ortholog | 2880.D8LLN9 |
Preferred name | ASPM |
KEGG ko | ko:K16743,ko:K16774 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648 |
EggNOG free text desc. | translation initiation factor activity |
EggNOG OGs | COG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759 |
COG Functional cat. | Z |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03036 |
Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
Ec32 ortholog | Ec-04_005040.1 |
Exons | 6 |
Model size | 1428 |
Cds size | 1428 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816987.2726815-CDS-L-elsbetiae_contig9125:2354..2564 | 1622816987.2726815-CDS-L-elsbetiae_contig9125:2354..2564 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 2355..2564 + |
1691683963.278544-CDS-L-elsbetiae_contig9125:2354..2564 | 1691683963.278544-CDS-L-elsbetiae_contig9125:2354..2564 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 2355..2564 + |
1622816987.2832637-CDS-L-elsbetiae_contig9125:3352..3502 | 1622816987.2832637-CDS-L-elsbetiae_contig9125:3352..3502 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 3353..3502 + |
1691683963.2923505-CDS-L-elsbetiae_contig9125:3352..3502 | 1691683963.2923505-CDS-L-elsbetiae_contig9125:3352..3502 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 3353..3502 + |
1622816987.2929454-CDS-L-elsbetiae_contig9125:4373..4634 | 1622816987.2929454-CDS-L-elsbetiae_contig9125:4373..4634 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 4374..4634 + |
1691683963.3023744-CDS-L-elsbetiae_contig9125:4373..4634 | 1691683963.3023744-CDS-L-elsbetiae_contig9125:4373..4634 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 4374..4634 + |
1622816987.30671-CDS-L-elsbetiae_contig9125:5283..5475 | 1622816987.30671-CDS-L-elsbetiae_contig9125:5283..5475 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 5284..5475 + |
1691683963.3120985-CDS-L-elsbetiae_contig9125:5283..5475 | 1691683963.3120985-CDS-L-elsbetiae_contig9125:5283..5475 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 5284..5475 + |
1622816987.320588-CDS-L-elsbetiae_contig9125:6299..6569 | 1622816987.320588-CDS-L-elsbetiae_contig9125:6299..6569 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 6300..6569 + |
1691683963.3219953-CDS-L-elsbetiae_contig9125:6299..6569 | 1691683963.3219953-CDS-L-elsbetiae_contig9125:6299..6569 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 6300..6569 + |
1622816987.3311117-CDS-L-elsbetiae_contig9125:7616..7961 | 1622816987.3311117-CDS-L-elsbetiae_contig9125:7616..7961 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 7617..7961 + |
1691683963.335251-CDS-L-elsbetiae_contig9125:7616..7961 | 1691683963.335251-CDS-L-elsbetiae_contig9125:7616..7961 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9125 7617..7961 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9125.18154.1 >prot_L-elsbetiae_contig9125.18154.1 ID=prot_L-elsbetiae_contig9125.18154.1|Name=mRNA_L-elsbetiae_contig9125.18154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=476bp
MVFGATADDVDLGLPPARRMSSSADGPLRKGRRRGGGRDEEAIAGAAPET VVLVLGNFQGVVVLDMGLVAVGEGKTATLKIEAPDGARKPVTRVGVDPRH PLAGGLEVNFDGELSLARGESHEAEVTWRPECGGKLRTNVSFKVDGRFPA QVSVVGEAVDPAAAGKERSDARKGRKRVKGQSAGSDGGRRRSLSQDTALG GAGPYASMYGKENRLSLSSTALPPAASVLGSSSASVAALSQGTANKRQQM LKYSKSRRLSLKPAAHGKRGKSESATTGAGGGGVGGSKATLLRKSLSDKG WAEKQTAGFTDWLNFTLVGAEQLRHGGDGGGEGGDGDGGGGRLTAEVGGV SSSPLKAMVTMRREARQRMRAMLLFRSAEVRGATEAVADRAHDGTLSLRR DRVLHADVGLSGALLDLVLCYEPRWLVLGLETVFGEIVPMPPVAAGAGAA AAAASSSSSAKSGGRVDRALRTFVAE back to topmRNA from alignment at L-elsbetiae_contig9125:2355..7961+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9125.18154.1 ID=mRNA_L-elsbetiae_contig9125.18154.1|Name=mRNA_L-elsbetiae_contig9125.18154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5607bp|location=Sequence derived from alignment at L-elsbetiae_contig9125:2355..7961+ (Laminarionema elsbetiae ELsaHSoW15) ATGGTATTCGGAGCCACGGCGGATGATGTTGATCTCGGCCTGCCGCCGGC
GCGACGCATGTCGTCGTCGGCGGATGGCCCTCTCCGCAAGGGACGTAGGA
GAGGAGGAGGGCGCGATGAGGAAGCAATAGCAGGAGCAGCGCCGGAAACA
GTGGTGCTTGTCCTGGGGAACTTCCAGGGGGTGGTGGTCCTCGACATGGG
CCTTGTCGCGGTGAGTTTTGGTGATGACTATATAGACTCTGCGGTGATTT
CCTGTTGGAGAACACCGATCACACTCAAACGGCCAGAGCTATTTGCTGCA
TGCGACCCCGGCGCGGACTGCTATTGTAACGTACAACCGAGCACGGCTGC
CTGCAGCAGCGGTGTGTTCCAAGTTGAGCCTGAGGTTCGTCTCGGGGTGT
GGCTAGTTCAGAAGGTCCCCGACAGCTGCGGTGTTGGTTGTGGCGTGTTT
TTGCGCGCGCTCTATCGCGGGCGAGACTGGAGACTGGAGAGGGGTATCAA
ACATCGTATGGTTACTGGTAGACATGCTCCACGTTGGTAGAAGTGACCTC
GCATCGTATCGCACGTACTCTCTCTCTCTCTCTCTCTCTCTCTGCAAAAG
CGAGCTGTGCACGCTCCGCTTTCGCACAGCGCCGGATTGCACGCACCGCC
AGCTCGCGTCCTCTTCTCTCGCCAGTGGCGGTGTGCACTAGAATCTAGAA
TACCCGTCCGTTGGGCATCATCTTTAACCGCCGCACCTTCTACGCGATGA
GTGAGCTCACGCCTAAGTTGGCAGGAAGAGCGGCCAGGACCAATGACCGT
TGACGCCACCGCCACCGCTAGAGAGGGCTGGAGCAGTAGGATTCTAGTCG
GGGAGGTTGACTTGCCGCTGAAAACACACACGCGCGCGCGCGCGCGCGCG
CGCGGTGATGATACATACAGAAGAAAAATTGAAAATGTACTTCGTAAATA
CCGACAGAGAGTAGATACAACATTGAAGTACGAAACGTTCACAATCAGGT
GGGCGAGGGCAAGACGGCCACGCTTAAGATCGAAGCGCCCGACGGCGCCA
GAAAGCCGGTGACGAGGGTCGGTGTCGATCCCAGGCACCCGCTCGCCGGC
GGCCTGGAGGTCAACTTCGACGGAGAGCTGTCGCTGGCACGGGGAGAGGT
GAGCGGCGGAGAAGGCGTTGGTCGGTCGATCAGCGCTGGGAACAAACACC
CTTCCTGCACGTGGGGGGGGGGGGGGGGGATTATTCACACGGGGGGGGGG
GGGGGGGGGGGAGGGGGTGGCGGGGGGCGGACGGGCGGGCGAAACACCCC
CGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCTTATTCATACAGGAG
AGGGCGCGTTTGTCTTGAGACGGTGTTTTGTCCTGCCGTGCCTGCTGTGT
TGGTTGGGGGCTCAGGGGCCGGGTCAAGCCGAGACGGGGTCGAGATTCTT
GCTGCCTGAAGCACCGGGGACGCTCCCGTATTTTATTCACTGCCTCGGCC
ACCGGGCGGAGAACGTAGGTACAAACAACGCGGCTGTGCAAACCGGCGGT
GTTGGGGAGCGTTTTGGCACGGTGTACCGAGTGGTTGGTGCTGCCACTAC
TGCTGTGTCGGTTGGGCAGGCTAGAAGTATATATATACACAGCTCTTTCC
GGGCCGTTTGTCTTGAAAACGAACGCGCGCACCCCGCAAAGAGAGGCGCG
TGTTGCTTCCTCCCCCCCCCCCTCCTCCTCCTCGCCTTTTGATGGGTAGA
TATATACGTTCCACCCCTTCGCCACACCTGCTGCTTTTGGTGCTGCTCCT
GCTGCCGCCATCCCCTCCTGTCCGACCAAACAACCCGACGATGACACCAC
CACCACCACCAACAACAACAACAACAACAACACACAACGACAACACCAAC
AAAAAAAACAACAACGACAACAACAAAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAAAAACCACCGACACACCGTCCCGAA
CACGACAACGAAACAAAAGTCTCACGAGGCCGAGGTGACCTGGCGGCCCG
AGTGCGGCGGGAAGCTCCGGACCAACGTATCCTTCAAGGTGGACGGCCGC
TTCCCCGCCCAAGTGTCGGTGGTGGGAGAGGCTGTGGACCCCGCCGCCGC
CGGCAAGGAGAGGAGCGACGCCCGCAAGGGCCGGAAGAGGGTGAAGGGGC
AGTCCGCAGGGTCCGACGGCGGGAGGAGGAGATCCTTGTCCCAGGATACT
GCTTTGGGGGGAGCCGGACCGTACGCTTCGGTAAGGGGGGGGGGGGGGTT
CTCGGAGAGTGAGGTTGTTGTTGTTTCCTTTTTCATTCAGTCGGGTGGGT
GGGTGTGCTGTTTTTTAGGGCGCACGCGCTGGGACAGGGTGTTGCTTGCG
ACCCTTTCCAATACTGGTGTTGCCTGCTGCTTCTCTTAAATACTGGCGTT
TTCTTAAATACTGGTGTTTTTTTTTTTAATGTATTTACCCCAGAACTTTT
TTTTTTACATTTATTACATACATACCCGTTGCCGGCGAGCCACGCTCGCG
CATCTCGGGGAAAAGTTTTGGGGTTTTGGCCGGGTGTGTGGCGCTTGTGC
TGCCAGCTGCCGCAGAGGATCGCGCCGGGGACTGGGGTTTTCCACGATGC
GGGTAACAACAGGGCCGTCTGGCATGTGTATGTAGATATGTGGCTGAGCG
CGTCGCGACTTGGTACCGGCCCGTTGCTTGTGACACCATGCACGCATCCA
CGTTGCTCGCGTTTTGCGAGCGTTTATGTTTTTTACATCACCAGCACCCG
CATCCCACGTGCAAACGTCCCTGTTGGCTTTTCCCCCGATCGTGTCGCGT
CGGCGGTTGCAAAACCTGCCCTGCTTCCGCCCCCGCCCCCGCCCCCGCCC
CCGCCGAATCAAATGGAAAACACCACCAGATGTACGGGAAGGAGAATCGC
CTGAGCCTCAGCTCGACTGCGCTGCCGCCCGCGGCGTCGGTGCTGGGGAG
CAGCTCCGCCTCGGTGGCCGCTCTCTCCCAGGGCACGGCCAACAAGCGGC
AGCAGATGCTCAAGTACTCCAAGTCGAGGCGGCTGTCGCTCAAGCCGGCC
GCGCACGGCAAGCGGGGCAAGGTGAGAGGAGGGGAGAAGAGAGGACGAGT
ATGGCTCTCTTTTTTTTGTGCGCGCAGTGCGTACGTACATAGGCCGTAAG
CCCTTGGGGGGGGGGGGAGTTGTCGTGCTGCTGGTTGTGTCGCGCCCTGC
TGCGGGTGGGTCGGTGTGTGCTGCTGTGGTTGTTGCCGAGCTGTGTGTGC
TCTGCGACCGGCCAGCCATGCTCGCCGGTGATGTCTCTGCTTCATATGTA
GATTGATGCGTGTATGTTTGTATTCGTGGGCTTTTGGCGCACAACGTTTC
CTGGCGATATATAGCCTACAAATGTAGTAGATGCGGCCTGCTCTGCAGCC
ATCCGCGCGGCGCGGTTTTGCTCTTTGGGAAGCACGAGGCTGGTCAGTTG
TGTAGGTCTATGTACATACATATGCTTGGTGTGTGTTTCAGAGCTTGTTG
CGAGTTTGTGTCTTTCCCGGTTTTTTTTTTTTGTTTTTTTTTTGTCTTTT
TTTTGTCTTTTTTTTTGTTTTTTTTTCTTGTCTTTTTCATTTGTTTGTTC
TCAACCGAGTGAATATGTGTATGTACAAAAGTAACGTGAAAACCGCTGCC
CCCATGGCCGTCGTCTGCAGCGACCGCCCCACGCACAGCCGTGTATCCGG
CGACGTGAGCCGGCGGTGCGTCAGTCGTACCTCCTTTAGCACTGCAGCAG
TAGCACTAGCGCTGCTGTCGCCATCCGTGCGAACACTGACCGAACCACCG
ACCGCCGGATAGCTATTTTGAGAGTTTATGTACATACATGTGTATCGCCA
ATACATACGTGTTTCTGCTCGTTTTTGTACCGGCCTCCTCGACAGTCGGA
GAGCGCTACCACCGGTGCCGGGGGGGGCGGAGTTGGGGGCTCGAAGGCCA
CGCTGTTGCGCAAGTCCCTGAGCGACAAGGGCTGGGCCGAGAAGCAGACG
GCCGGTTTCACGGACTGGCTCAACTTCACGCTCGTCGGCGCCGAACAGCT
CCGGCACGGGGGCGACGGTGGCGGAGAGGGGGGGGACGGGGACGGGGGGG
GCGGGCGGCTCACCGCGGAGGTTGGGGGGGTGTCGTCGAGCCCCCTGAAG
GCCATGGTGACCATGGTGAGTGCTGTTGCCGCGGGCGGGGCGGGGGTTTA
CGAGAGAGGCTGGGTTTTCGTCTCGCTCGCTCGATTAATTGGTCCTCCCG
AGGGTGTTTTTTTCGGCGAACGAATGGGCTTGTCGTCTCTGTATGTAGAC
GCTGCTGCTGGGAGCAAGGAGCGGTCGGTCTGCTGGTGTGATTTTCTCTT
TGTCATGCCTGGGACAAAAGTTTTGCTCTTCTTCGCTGGCTGCAGCCCGA
TACACGAGGTGAAGGAAAGAGCTTTGAGTTGTAGGTATGTTTTATTGATG
GGTGCAAATGTCAGCAGTCTACTTACGTACGTCCAGTTTGCGAAAAAGTC
GTTCCAGGGGGACTGATACTGTTGTAGACAGTCCCGTTGACAGTCCCGCC
GCCCGGCCTCTTTTAACTAATGTACTTCTATACAAATGTCAGCAGTCTAG
GTCCAGTCTTGAGAAAAAGTCGTTCCAGGGGGACTGCTGTTGTAGGCATG
CTACATAACCCTCCCTCTGCTTTTAGCGCGTTTAGAATGAATGTTGGTTC
CTACTAGGACCACTCGTCTCCGCTCATGAATACACTACCCTCAGTTTTGT
CACGGCAATAAATTATTATCTAGTCTACAGTTCTTCGGCGAGACGCCCGG
TCCTGTCACAAACTTGCGGATACCCTTGCGGATCATACCAGTACCGATCT
CTCCGCGTAAGGATAGCGTGTGTACAAAATACATAAATATCGTGCGTTGT
TCTGCAAACTAAATATTTGGATAAAAGAGTACGATACAAATTTTGTGCGG
ACCTGCCTGATCCCTGCTCTCTCTCCTGTACCTCTCTCGCTTCCTCCTTC
CTCGCCGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAC
CCCCAACCCCCCACCCACACCCGCACCCGCCCCAACCCCCCCCCGCCGGG
CAACAAAAAAAAAAAAAAACAAAACGAACGATCGATCGATCTAAATTCTG
ACCGACTGAAATAAAAATAAAAATAAAATAAAAATAAACACGCCTCCTCT
GAAAAAAAACAGCGGCGGGAGGCGAGGCAGCGCATGCGCGCCATGCTCCT
GTTCCGGTCGGCGGAGGTTCGCGGGGCGACGGAGGCGGTCGCGGACAGGG
CCCACGACGGGACCCTCTCGCTGAGGCGGGACCGGGTGCTCCACGCGGAC
GTGGGGCTGAGCGGGGCCCTCCTGGACCTGGTGCTCTGCTACGAGCCCCG
CTGGCTGGTCCTGGGCCTGGAGACGGTGTTCGGCGAGATCGTGCCGATGC
CGCCGGTGGCCGCCGGCGCTGGTGCCGCTGCCGCTGCTGCTTCTTCTTCT
TCTTCGGCGAAGAGTGGTGGGAGGGTGGACCGGGCCCTCAGGACGTTCGT
GGCGGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9125:2355..7961+ >mRNA_L-elsbetiae_contig9125.18154.1 ID=mRNA_L-elsbetiae_contig9125.18154.1|Name=mRNA_L-elsbetiae_contig9125.18154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2856bp|location=Sequence derived from alignment at L-elsbetiae_contig9125:2355..7961+ (Laminarionema elsbetiae ELsaHSoW15) ATGGTATTCGGAGCCACGGCGGATGATGTTGATCTCGGCCTGCCGCCGGC GCGACGCATGTCGTCGTCGGCGGATGGCCCTCTCCGCAAGGGACGTAGGA GAGGAGGAGGGCGCGATGAGGAAGCAATAGCAGGAGCAGCGCCGGAAACA GTGGTGCTTGTCCTGGGGAACTTCCAGGGGGTGGTGGTCCTCGACATGGG CCTTGTCGCGATGGTATTCGGAGCCACGGCGGATGATGTTGATCTCGGCC TGCCGCCGGCGCGACGCATGTCGTCGTCGGCGGATGGCCCTCTCCGCAAG GGACGTAGGAGAGGAGGAGGGCGCGATGAGGAAGCAATAGCAGGAGCAGC GCCGGAAACAGTGGTGCTTGTCCTGGGGAACTTCCAGGGGGTGGTGGTCC TCGACATGGGCCTTGTCGCGGTGGGCGAGGGCAAGACGGCCACGCTTAAG ATCGAAGCGCCCGACGGCGCCAGAAAGCCGGTGACGAGGGTCGGTGTCGA TCCCAGGCACCCGCTCGCCGGCGGCCTGGAGGTCAACTTCGACGGAGAGC TGTCGCTGGCACGGGGAGAGGTGGGCGAGGGCAAGACGGCCACGCTTAAG ATCGAAGCGCCCGACGGCGCCAGAAAGCCGGTGACGAGGGTCGGTGTCGA TCCCAGGCACCCGCTCGCCGGCGGCCTGGAGGTCAACTTCGACGGAGAGC TGTCGCTGGCACGGGGAGAGTCTCACGAGGCCGAGGTGACCTGGCGGCCC GAGTGCGGCGGGAAGCTCCGGACCAACGTATCCTTCAAGGTGGACGGCCG CTTCCCCGCCCAAGTGTCGGTGGTGGGAGAGGCTGTGGACCCCGCCGCCG CCGGCAAGGAGAGGAGCGACGCCCGCAAGGGCCGGAAGAGGGTGAAGGGG CAGTCCGCAGGGTCCGACGGCGGGAGGAGGAGATCCTTGTCCCAGGATAC TGCTTTGGGGGGAGCCGGACCGTACGCTTCGTCTCACGAGGCCGAGGTGA CCTGGCGGCCCGAGTGCGGCGGGAAGCTCCGGACCAACGTATCCTTCAAG GTGGACGGCCGCTTCCCCGCCCAAGTGTCGGTGGTGGGAGAGGCTGTGGA CCCCGCCGCCGCCGGCAAGGAGAGGAGCGACGCCCGCAAGGGCCGGAAGA GGGTGAAGGGGCAGTCCGCAGGGTCCGACGGCGGGAGGAGGAGATCCTTG TCCCAGGATACTGCTTTGGGGGGAGCCGGACCGTACGCTTCGATGTACGG GAAGGAGAATCGCCTGAGCCTCAGCTCGACTGCGCTGCCGCCCGCGGCGT CGGTGCTGGGGAGCAGCTCCGCCTCGGTGGCCGCTCTCTCCCAGGGCACG GCCAACAAGCGGCAGCAGATGCTCAAGTACTCCAAGTCGAGGCGGCTGTC GCTCAAGCCGGCCGCGCACGGCAAGCGGGGCAAGATGTACGGGAAGGAGA ATCGCCTGAGCCTCAGCTCGACTGCGCTGCCGCCCGCGGCGTCGGTGCTG GGGAGCAGCTCCGCCTCGGTGGCCGCTCTCTCCCAGGGCACGGCCAACAA GCGGCAGCAGATGCTCAAGTACTCCAAGTCGAGGCGGCTGTCGCTCAAGC CGGCCGCGCACGGCAAGCGGGGCAAGTCGGAGAGCGCTACCACCGGTGCC GGGGGGGGCGGAGTTGGGGGCTCGAAGGCCACGCTGTTGCGCAAGTCCCT GAGCGACAAGGGCTGGGCCGAGAAGCAGACGGCCGGTTTCACGGACTGGC TCAACTTCACGCTCGTCGGCGCCGAACAGCTCCGGCACGGGGGCGACGGT GGCGGAGAGGGGGGGGACGGGGACGGGGGGGGCGGGCGGCTCACCGCGGA GGTTGGGGGGGTGTCGTCGAGCCCCCTGAAGGCCATGGTGACCATGTCGG AGAGCGCTACCACCGGTGCCGGGGGGGGCGGAGTTGGGGGCTCGAAGGCC ACGCTGTTGCGCAAGTCCCTGAGCGACAAGGGCTGGGCCGAGAAGCAGAC GGCCGGTTTCACGGACTGGCTCAACTTCACGCTCGTCGGCGCCGAACAGC TCCGGCACGGGGGCGACGGTGGCGGAGAGGGGGGGGACGGGGACGGGGGG GGCGGGCGGCTCACCGCGGAGGTTGGGGGGGTGTCGTCGAGCCCCCTGAA GGCCATGGTGACCATGCGGCGGGAGGCGAGGCAGCGCATGCGCGCCATGC TCCTGTTCCGGTCGGCGGAGGTTCGCGGGGCGACGGAGGCGGTCGCGGAC AGGGCCCACGACGGGACCCTCTCGCTGAGGCGGGACCGGGTGCTCCACGC GGACGTGGGGCTGAGCGGGGCCCTCCTGGACCTGGTGCTCTGCTACGAGC CCCGCTGGCTGGTCCTGGGCCTGGAGACGGTGTTCGGCGAGATCGTGCCG ATGCCGCCGGTGGCCGCCGGCGCTGGTGCCGCTGCCGCTGCTGCTTCTTC TTCTTCTTCGGCGAAGAGTGGTGGGAGGGTGGACCGGGCCCTCAGGACGT TCGTGGCGGAGCGGCGGGAGGCGAGGCAGCGCATGCGCGCCATGCTCCTG TTCCGGTCGGCGGAGGTTCGCGGGGCGACGGAGGCGGTCGCGGACAGGGC CCACGACGGGACCCTCTCGCTGAGGCGGGACCGGGTGCTCCACGCGGACG TGGGGCTGAGCGGGGCCCTCCTGGACCTGGTGCTCTGCTACGAGCCCCGC TGGCTGGTCCTGGGCCTGGAGACGGTGTTCGGCGAGATCGTGCCGATGCC GCCGGTGGCCGCCGGCGCTGGTGCCGCTGCCGCTGCTGCTTCTTCTTCTT CTTCGGCGAAGAGTGGTGGGAGGGTGGACCGGGCCCTCAGGACGTTCGTG GCGGAG back to top
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