mRNA_L-elsbetiae_contig912.18150.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig912.18150.1
Unique NamemRNA_L-elsbetiae_contig912.18150.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: D8LIW3_ECTSI (RAC, RHO family GTPase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LIW3_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.020e-127
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVIS 852
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQ HAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQ LA++LDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRK KKKKGK KNCVIS
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGK-KNCVIS 196
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A835Z467_9STRA (Rho family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z467_9STRA)

HSP 1 Score: 320 bits (820), Expect = 2.350e-100
Identity = 153/173 (88.44%), Postives = 160/173 (92.49%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAI 780
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVD TSF NVKLKWIPELQHHA G+PFILVGTK+DLR+D  A + LAERRQ PISF+EAQ LA +L AYRY+ECSALTQ GLK VFDGAI
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDTTSFQNVKLKWIPELQHHAAGVPFILVGTKMDLRNDSKALRSLAERRQQPISFNEAQNLANELGAYRYMECSALTQQGLKHVFDGAI 173
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: F0Y6L3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L3_AURAN)

HSP 1 Score: 312 bits (799), Expect = 2.730e-97
Identity = 146/196 (74.49%), Postives = 169/196 (86.22%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVI 849
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+ +P SF N++ KW PE+ HHAPG+PFILVGTKLDLR+D D   RL ++R+ P++  E + LA +L+AY+Y+ECSALTQ GLK VFD AIRCV++  Q+K KKK   +K CV+
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITNPNSFENIRTKWYPEINHHAPGVPFILVGTKLDLRNDPDTIARLQQKRRAPVNTEEGEALANELNAYKYIECSALTQQGLKGVFDDAIRCVID-TQKKPKKK---SKRCVL 192
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A067CJ94_SAPPC (Ras-like protein Rac1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ94_SAPPC)

HSP 1 Score: 308 bits (789), Expect = 8.540e-96
Identity = 145/196 (73.98%), Postives = 167/196 (85.20%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVI 849
            MQN+KCVVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KP+NLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPG+PFILVGTKLDLR+D+D  +RL E+R  P++    + L  +L A++YLECSALTQ GLKQVFD +IRCVL+ +Q+  KKK+    +C I
Sbjct:    3 MQNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDAKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLREDEDTVERLKEKRSAPVTHEMGEALKNELGAFKYLECSALTQKGLKQVFDESIRCVLQ-HQKNPKKKRS---HCTI 194
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A485LAI3_9STRA (Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAI3_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.520e-95
Identity = 144/196 (73.47%), Postives = 161/196 (82.14%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVI 849
            MQN+KCVVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KP+NLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPGIPFILVGTKLDLRDD++  +RL E+R  PI+  + + L  +L AY+YLECSAL Q GLKQVFD  IRCVL+  +   K  +     C I
Sbjct:    1 MQNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWFPEIQHHAPGIPFILVGTKLDLRDDEETIERLKEKRLKPITTEQGEALKNELGAYKYLECSALNQKGLKQVFDEGIRCVLQHQKNPKKSTRKFGSGCSI 196
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A1B3SNZ7_9STRA (Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0A1B3SNZ7_9STRA)

HSP 1 Score: 303 bits (777), Expect = 4.540e-94
Identity = 143/185 (77.30%), Postives = 160/185 (86.49%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTK 816
            MQNIK VVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPG+PFILVGTKLDLRDD++  +RL E+R +PI+  + + L ++L AY+YLECSALTQ GLKQVFD AIRCV+    +  K
Sbjct:    1 MQNIKNVVVGDGAVGKTCILISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVRPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLRDDEETIERLREKRLSPITPEQGEALRSELGAYKYLECSALTQKGLKQVFDEAIRCVIAHQSKPAK 185
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A8J2S6J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6J5_9STRA)

HSP 1 Score: 303 bits (776), Expect = 6.360e-94
Identity = 143/197 (72.59%), Postives = 165/197 (83.76%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVIS 852
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+ +PTSF NV+ KW PE+  HAPG+PFILVGTKLDLR+D +   RL ++R+ P++  +   LA +L AY+Y+ECSALTQ GLK VFD +IRCVL+      KK K K K CV++
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITNPTSFENVRTKWYPEIASHAPGVPFILVGTKLDLRNDPETVARLQQKRRMPVNSEDGMQLARELGAYKYIECSALTQQGLKGVFDDSIRCVLDA----MKKPKKKKKKCVVA 193
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A177UYL8_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UYL8_9BASI)

HSP 1 Score: 303 bits (775), Expect = 8.910e-94
Identity = 147/196 (75.00%), Postives = 163/196 (83.16%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVI 849
            MQ IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP++LGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+V P SF NV+ KW PE+ HHAP IP ILVGTKLDLR+D+D   +LAERR  P+S+++   +A D+ A RYLECSALTQ GLK VFD AIRCVL     KT+KK     NCVI
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRTKWWPEICHHAPHIPMILVGTKLDLREDRDEINKLAERRMQPLSYAQGNAMARDIGAVRYLECSALTQKGLKGVFDEAIRCVLAPAPIKTRKKN----NCVI 192
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: A0A163JA61_ABSGL (Uncharacterized protein n=5 Tax=Cunninghamellaceae TaxID=4851 RepID=A0A163JA61_ABSGL)

HSP 1 Score: 300 bits (768), Expect = 9.400e-93
Identity = 145/196 (73.98%), Postives = 164/196 (83.67%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVI 849
            MQ+IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFS+V P SF NV+ KW PE+ HHAP IP ILVGTKLDLR+D +  +RL +++ +PIS+++A  +  D+ A +YLECSALTQ GLK VFD AIR VL     +TKKKKG    C+I
Sbjct:    1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRTKWYPEISHHAPNIPMILVGTKLDLREDPETVERLKQKKMSPISYTQALQMTKDIGAEKYLECSALTQKGLKNVFDEAIRAVLSPASVRTKKKKG----CLI 192
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BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Match: K3XBT2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBT2_GLOUD)

HSP 1 Score: 299 bits (765), Expect = 2.760e-92
Identity = 139/190 (73.16%), Postives = 162/190 (85.26%), Query Frame = 1 
Query:  262 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGK 831
            MQN+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSA+VMVD KPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+V   SF NVK KW+PE++HHAPG+PFILVGTKLDLRDD D  ++L E++ TPI+  + + L  +L A++YLECSALTQ GLKQVFD  IRCVL   Q    +++GK
Sbjct:    1 MQNMKCVVVGDGAVGKTCVLISYTTNSFPGEYIPTVFDNYSAHVMVDLKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSRASFENVKSKWLPEIRHHAPGVPFILVGTKLDLRDDHDTLEKLREKKMTPITTEQGESLKNELGAFKYLECSALTQKGLKQVFDEGIRCVLTNQQNPKGRQRGK 190
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig912.18150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIW3_ECTSI3.020e-12796.95RAC, RHO family GTPase n=3 Tax=Phaeophyceae TaxID=... [more]
A0A835Z467_9STRA2.350e-10088.44Rho family GTPase n=1 Tax=Tribonema minus TaxID=30... [more]
F0Y6L3_AURAN2.730e-9774.49Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A067CJ94_SAPPC8.540e-9673.98Ras-like protein Rac1 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A485LAI3_9STRA2.520e-9573.47Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A1B3SNZ7_9STRA4.540e-9477.30Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 Rep... [more]
A0A8J2S6J5_9STRA6.360e-9472.59Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A177UYL8_9BASI8.910e-9475.00Uncharacterized protein n=2 Tax=Tilletia TaxID=132... [more]
A0A163JA61_ABSGL9.400e-9373.98Uncharacterized protein n=5 Tax=Cunninghamellaceae... [more]
K3XBT2_GLOUD2.760e-9273.16Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig912contigL-elsbetiae_contig912:8722..17026 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.4
Seed ortholog evalue3.1e-107
Seed eggNOG ortholog2880.D8LIW3
KEGG koko:K04392,ko:K07975
KEGG Pathwayko04010,ko04013,ko04014,ko04015,ko04024,ko04062,ko04071,ko04145,ko04151,ko04310,ko04360,ko04370,ko04380,ko04510,ko04520,ko04530,ko04620,ko04650,ko04662,ko04664,ko04666,ko04670,ko04722,ko04810,ko04932,ko04933,ko04972,ko05014,ko05100,ko05120,ko05131,ko05132,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05231,ko05416,ko05418,map04010,map04013,map04014,map04015,map04024,map04062,map04071,map04145,map04151,map04310,map04360,map04370,map04380,map04510,map04520,map04530,map04620,map04650,map04662,map04664,map04666,map04670,map04722,map04810,map04932,map04933,map04972,map05014,map05100,map05120,map05131,map05132,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05231,map05416,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0393@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Ec32 ortholog descriptionRAC, RHO family GTPase
Ec32 orthologEc-20_001790.1
Exons5
Model size2718
Cds size594
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816986.9994404-UTR-L-elsbetiae_contig912:8721..89821622816986.9994404-UTR-L-elsbetiae_contig912:8721..8982Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig912 8722..8982 +
1691683963.071765-UTR-L-elsbetiae_contig912:8721..89821691683963.071765-UTR-L-elsbetiae_contig912:8721..8982Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig912 8722..8982 +
1622816987.0739696-UTR-L-elsbetiae_contig912:15163..170261622816987.0739696-UTR-L-elsbetiae_contig912:15163..17026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig912 15164..17026 +
1691683963.1429863-UTR-L-elsbetiae_contig912:15163..170261691683963.1429863-UTR-L-elsbetiae_contig912:15163..17026Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig912 15164..17026 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816987.0132585-CDS-L-elsbetiae_contig912:8982..91041622816987.0132585-CDS-L-elsbetiae_contig912:8982..9104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 8983..9104 +
1691683963.0839694-CDS-L-elsbetiae_contig912:8982..91041691683963.0839694-CDS-L-elsbetiae_contig912:8982..9104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 8983..9104 +
1622816987.0292006-CDS-L-elsbetiae_contig912:9594..96971622816987.0292006-CDS-L-elsbetiae_contig912:9594..9697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 9595..9697 +
1691683963.094286-CDS-L-elsbetiae_contig912:9594..96971691683963.094286-CDS-L-elsbetiae_contig912:9594..9697Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 9595..9697 +
1622816987.0400953-CDS-L-elsbetiae_contig912:12052..121451622816987.0400953-CDS-L-elsbetiae_contig912:12052..12145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 12053..12145 +
1691683963.1050768-CDS-L-elsbetiae_contig912:12052..121451691683963.1050768-CDS-L-elsbetiae_contig912:12052..12145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 12053..12145 +
1622816987.0502756-CDS-L-elsbetiae_contig912:13176..133591622816987.0502756-CDS-L-elsbetiae_contig912:13176..13359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 13177..13359 +
1691683963.1162493-CDS-L-elsbetiae_contig912:13176..133591691683963.1162493-CDS-L-elsbetiae_contig912:13176..13359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 13177..13359 +
1622816987.0605264-CDS-L-elsbetiae_contig912:15070..151631622816987.0605264-CDS-L-elsbetiae_contig912:15070..15163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 15071..15163 +
1691683963.132073-CDS-L-elsbetiae_contig912:15070..151631691683963.132073-CDS-L-elsbetiae_contig912:15070..15163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig912 15071..15163 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig912.18150.1prot_L-elsbetiae_contig912.18150.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig912 8983..15163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig912.18150.1

>prot_L-elsbetiae_contig912.18150.1 ID=prot_L-elsbetiae_contig912.18150.1|Name=mRNA_L-elsbetiae_contig912.18150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp
MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP
INLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPE
LQHHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQGLATDLD
AYRYLECSALTQHGLKQVFDGAIRCVLERNQRKTKKKKGKNKNCVIS*
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mRNA from alignment at L-elsbetiae_contig912:8722..17026+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig912.18150.1 ID=mRNA_L-elsbetiae_contig912.18150.1|Name=mRNA_L-elsbetiae_contig912.18150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8305bp|location=Sequence derived from alignment at L-elsbetiae_contig912:8722..17026+ (Laminarionema elsbetiae ELsaHSoW15)
CTCGGACACACGGGCGGCTCCGGCGACATCGAGATTCGAATAAAACACGC
CCCGAGTGTACCATCAGAACATACGGGCGGCAAGCTCGCCTCCCACTTCT
GGCTGGGATCAGGGCAACGAGCAACCTGAGTTCGGAAATCGACGAGAGAG
TACTCTGGGCACACGAAAAAGCCGAAGAGGGAGGCACGTACCTACCTACC
TTGCGACGCCGCGCTGCTTCGGGCGTGACGGAAGAGCAGCGGGGGTCGGG
CAAAAGGAACGATGCAGAACATCAAGTGTGTCGTTGTTGGTGATGGAGCT
GTGGGTAAGACATGCCTGCTGATCTCCTACACGACAAACGCATTTCCTGG
AGAGTACATCCCAACGGTGTTCGACAACTACAGGTGCGACACTTGGCTTA
TCCCACTGAGATGCCGATGCTGCCGCTGTGCTGGGTCAGTATCCCAACTC
TGGAACAGGCTGGTGTAGTGTTCGAAACTTCAGAGGTCGCTTCCACCCAT
GTGTTTCCCGCTCTCGGTTCAGTGAGTGCACCAAACCGCGGGTAAAAAAA
CTGTTTCCTACCCAGCCATTGTCAAGAAGCCGAGGCAGCAATAGAAGCTT
ACGAGGGCAGCACGTATTGCTTGTTTGGGACTAGCCCTTCCTATCTCGGC
AGACCCGCATGTTCATGCCTGAAAGGCAAACCCCTTTTCAATTTCCCACT
GCTGTGAGAGAGTGCGTTCAGCTTACATCGAAGCGTGGAATCTATTGATC
GTTTCCAAGTTCACTACCGCCCAGCCGGGCCGATGTGGGAACGGCTTTGG
GTGTTGTTGATTTCCGATGAAAAAAAATGCGAGGAGCTCACACCGAGCCG
CCGCTTGCAATCAATCTGGACAGCGCGAATGTAATGGTGGATGGGAAGCC
GATTAACCTCGGGCTTTGGGATACCGCGGGGCAGGAGGACTACGACCGAC
TGCGGCCTCTGAGCTACCCGCAAACAGTAAGTTGGGTGCGCGTTATAGTT
CGTGCGTCGCGTGTGTGTTCTTTGTCTCTTGCTGACACAACTTGAAATTT
TCCAATCCTGCAAACGCGGTGCCTTGTGAACATCTATCTCTTTCAAGCAG
TATAACGAAGCACCAGTGACTTCAAACAGTGACCTCAAGAGAATATCAAA
ATCAGCGAGCCCGAATAGGATCAGAAAACAGTAGCTGTAATTGCATCACG
TCATCACTGCTGCTGTGTCTCGGTGGTGCTTGTATGTAGTCTGCCTGAGG
AAGGAGGACGCGCGTTGAGCGTCGAGCACCTGCCTGCGTTTCTTCCTCTC
TAGAATTGGACAAAAAAATTGACAACGGTTGGGACGTCTAGGGTTGACAC
GGCACGAGGAGTTGAGAGGTCTCTTGGTACATTAAATACATACGTACACC
TGATTTTACCATGCCGATAATTACCCCAAGTGGTTTAAGCAACAGAGTAG
GTCGAGTAAGTGTTGTGAGCAGCAGCAGTGCTGTGCGGTTCTCCTCACCC
CTTACTCCAATTTTCTCTTCACACCATCGGTCGCGCCCCTGGGCCTTGCC
ACGCGGAAAGATTGAGATTCTGGAACGAAAAAAAAGAATTACTTCCGCGA
GTTTCCCGCTGCCGCGTTTGACGCTCTCCGCTTTCTCATTTTTCACTGGT
GCGCGTGCGCGCTTTGCTTGCTGTACTCCTATGTTGTAATCCCGAAAACC
AAAAACTAGTTGTACCGTAGATACTTCCAGCTTCCACAAATCATACATTG
TTCACAGAGAAATTGCCGGAAAAAAGTACTCGGCAAAACCCGTCATAGAA
TTGGGTCAATCAATACCACATCTCCGACGGTTTCTTCGGTAATGGACAGA
CAGCTAGCTCACCGACAGTATCGAAGCAGAGAGGGAAGGGCAGCAAAACG
TGGAGTAACCTAGAAGTAGTTTTCTTCACGAGCCTACGCAAGTCTTTTGC
GTTTGTCTGGTTGTATTTATTCCAAAAGTGTTCTGTTTCTGTCCTGAGCA
CACAAGATCACATAGCTGCCCTGGTTACACCATTGTACAATTGTATACTA
GGTTATATAGTATTGTTCTTTATATCAGTGCTGCGCGTACGGTCGTCTTC
TCTGGAAGCACTTTGTTCATCCTCTCCTGCATACCATCTTCATCTTCTCT
GTACCACCCCTACATGGGTACTGCTGTAGCACGCGAACTGAAACACCGAT
GGGAAGTCGGCGGCCGAGAAGCATCCGTGGTTAGGAACACATACATACGT
ACACACACATATACATAAATTATGTGTTAGCAGAATAGGTGTACATGTGT
AAAACATAAGTAAACGCGTCTGATGTATAGTAGAGCTAGCCGGTTCACTC
GTGTGCGTTTGCTTGCAGTATTAAGGTGGCGGCTGAGCTCGTCGACACCG
ACCTCTTTCTCTCATACCTCGCTACATTCAACGAATACGTATGTACACAC
ACCACATTTATTATTATTTTCTCAACATACTTCGGACGAGGGTCTTTGCT
TCCAGGGAACCAACTACAACCGAAGAGACTTCCAAGTGGACATTCCATAT
TGTTGGCCTTTGAGTCTCCGTACGTCGGCCTGCCTCTGGCTTACACTCTG
ACTCTCTTGTGCCACGGTCTCAACAGTAACGTCTTAAGCCACGGTGCTTG
CTGGCCGAAATATGGGGTCGGGGGAGATAACTCCGAAGTGGTTTTTGGCT
GTTGACTGTTAGCCTTGCCTGCCCACTCCGAGAGCCGGCTGCCTCAAAGC
TCTCCACTTCCACTCTCCGCAGAGTGAGGGTTGTTCTTGTGGAGATATTT
TTTCTTTTCCACCGCGTAAATCACGATTCGATGAGGCCTACCATACTCCA
GAAGAGAGTTAGCGCACCGCACAGAAAGGCTTGGTAGGTACATACATTTT
GCGTTGTGTGTTTTATGTACGTTCATAACTGTTAACACCACTCTTTAAAT
ATGGGAGATTAATTTACTCGTAGAAGGAGTGCTGCCTGCGCAAGATCGGA
AACCGCAACACCAGCAGTGTGTTTGGCCTACCCGCTACCCAAGAACTTCC
TGTTTTGCATGACAGATTGTGTGACCCATCTCCACTCCAGCTTTTTTTTC
TCATCATCTGCGTTGAGGAGTTTCGGCAACGTTTTTGGAGTTGGGATCCA
CCACTCACGCAGAAAAATAGGCATGGCGTTCATGTGTACCGGAAAGATGA
AATGTGCCCTTCATATGTTTTCAACGGCCGCCGTGCCCGACGACGTCGGA
GCCAACCTGCTTTGCGTTTCGACAGCAACAACGACAACGGCGTTACTCCC
ACGTGCGATCGTTCGGTCTTGACATTGACAGGACGTGTTCCTCGTCTGCT
TCAGCGTCGTAGACCCCACGAGCTTTCACAATGTTAAGCTCAAGTGGATA
CCCGAGCTACAGCATCACGCCCCGGTGAGAGAGGGAGAGAGGCAGGCATA
CATTTGGCATAAGCTCTGTCGTTATTGTTGCTCTTGCTACTGCTGTTGCT
GTTGCGCGGACGGGGGCCGTTGTGGTGGATGGCTTTTGCGTTGCCTGTGT
GCCGTGCCGTAGCGTTGGCGTTTGCATCGTCTCCTGGCGATGCTCTCTTC
TTTTGACAAGTTCTGTGTGCCCTTGCAGAAGCAGCGAGGTGTAGTCTGTG
CCTCTGCTGATGCTTTCAGCTGGGCATGCGTGCAGCATCCGGTCCCCTTG
AGTTCGTCGCCCGGGGCCGACCTCATGGCTCACGACCAGACTTCAATCGC
TCTATTTATGTATGTTGCTGGACGGTGAGCACACTCATCCAAACCCGGCA
CTTTTGCCCTCTTATGTGATGTGTTGCCCGATGTGTGTTCAAGTTTCCCT
TTCAGGCGTTGCCTATGAAAGAAAAGTAGTCCAGGGGGCGAAGCAAGAGA
ACGAACCAAGCGTCCGATACCTGCATGCTGTTCTGCCCAACTTGGAGCGT
TTTCAACGATTTCAAATAGTTTCAACAGTTCAACACCGGGAAGGAAACTG
AAGGCCGTTGCAAAAACGTTGTGCCGGTTCCCGCACGTGTATGTTTGTCA
TCTTCTGAAAACAGCCAGATGAGAACAGCTAGCTGTCAAGAACCTGATAC
TTGTTGACTGTTGTTCGAGATGCGCAACACTGCGAAGTTGCTGAGGAAAT
GTGCGGGCGGCTGTGGTGCGCGCGTGGACGGCGGGCGGCGTAACAGCTGT
CACACTGGTCAAATGCGCCACGTCCGGCGTCAGCCTGAAACATCTCCTCA
AAAGCCTGGTTCCTACGCGTGGCTTGCGACAAACAGCCCACAGACCCTGC
ACCCAGGGACAGCCAAATCTATCTGCACCTGTATCTATGTAATCGAGCAC
AATTATGTAAATGTAGACCGCTTCCTGGACTGCTGGCAGTGTGTTTATCC
TCCGCCCGCTGGTCTTGTCTCCCTTCTTTTCCCTCCCGTGATCACGAAAC
AACAGGGTATCCCCTTTATCCTGGTCGGGACAAAGCTCGACCTAAGGGAT
GACCAGGACGCCTGCAAGAGACTGGCGGAGAGGCGGCAGACGCCCATTAG
CTTCAGCGAGGCGCAGGGGCTAGCTACGGATCTCGATGCGTATCGCTACC
TAGAGTGCAGCGCCCTCACGCAGCACGGGTTAAAACAGGTGTGTAGTATG
TATATAGGTACGGTGGGTGGGATTTGGGCGCTTGGGCGGATTGATTGGTT
TGAGCAGCTTAGCTTGTTTGCGTGTTGGGCGGGTGCAAGCCGCAAGGTGC
CGTGACACTCAACGCACACCCAGCCCAATCCTGTCCATACTCAATCCTAA
ACACGGAGAGACCGGGAAATATGAATGTGGTTACTACGCAACTACCGAAA
TGGTGCGCTGCTTCTTAATTTGCTCGGACGCTTGTCCAATGAGCGCGCTG
GTAAACGTGTGGGTATCCGCAAGAAGAAAAAAAAATGAAAACCGCCAAAG
CGGTGCTTCTTCGGAGACGGTGCAGTTTCCCGTCTTCGGCAATAAAAATC
AGGTGCCTTCGCGAATTCTGCACTTTGGGGATGATGTTTCTGGTGGTGCT
AGTGCCTGTGGTATAAACCCTTTATGATCCGGTTTAGGAGGAACAGTAAT
GGCGCTGAATGCTCACACTTCCTGCCGGCGGACAGGGGGGCACCTGAACC
CCATGTTAGGTAGTAGCCCAGGTCATCGAAGTGAAGTAATTAAAGGAAGG
GGGGGAGCGGGGAACACCAAGGATTACCATCCCTCCCAGCGGTTGGTTGG
AGAGGACAGACGCTTTCAAATTTGAAGGAGGGGTGCTCTTGAGAGCTAGT
TTTTGGAGCAAGACACCTCCAGAAATAGCACCGGTGGTGGGTGGGTGGGC
GAGTTGGTATACCGGGAGGATGGAGGCCGCAATTTCCCCGATGATTTCAA
AGTCGTACCCCCAACTCGCCGCGACTATTCGTGGGGCTAATCAAAACTTC
GAAATACTGCTCAAGCTAGTCGAAGGCCATGCCCCAATCGGAGTATCTAT
CGTACGTTGAAGCTGGTCGAAGGCCATGCCCCAATCGGAGTATACATCGT
ACGTTAAAGCTAGTCGAAGGCCATGCCCCAATCGGAGTTTCTATCGTATG
TTGAAGCTAGTCGAATGCCATGCCCCAATCGGAGTATCTATCGTGTGTTG
AAGCTAGTCGAATGCCATGCCCCAATCGGAGTATATATCGTACGTTAAAG
CTAGTCGAATGCCATGCCCCAATCGGAGTATCTATCTAGGGTTGTTGTCC
TGGAAATGTACCCTCGATGCTGATCATGCGCGGACCGACTCCTGTACTAG
CTGCGAAATCTTCCAGAATCTCGATTGCTGTGTTGTGCAGGGTTAGAGCC
GGGCTACGCCGCGGCGGGACTGTCAAAAGTGCGTGCGCGGTGAACTCGCA
AAAAATCACACTCAAAGCTTCAGAATATTCCTTGAACTTAGTTTCTTTTT
TTTTACAAAGCGGTACATGTAAGCCGTACGGCTTAAAGGAAACACGGTTT
TGTCACCCACAGCAGTATGGCGAGCCGTAGTCTTCGTATGTACCGCTCTT
GCGTCGTTGCGGCCACCCAACGGACGGTAAATTCTTGATGCCTGCCAACG
CCTTCCGGTTTATTGTGTGATGGGATGGTAAGGCGCGGCGGTGTGAGTGG
GTACATTCGGAAGTGGGGCTTGTCTTATCGATAGGACTCCGAGTGGGTTA
AATAAAGTATGTAGTCAAAATACACTTGCATTGCAACCACGTAACCCGCC
CGATGTAACTGACTTAAAACCTCTTGCGTAGTGAACTGCAGTTGACGAAT
GGTTCAAACTAATCACACGGCACGGTCCGCGCTTTCGGCACGGCCTCAGG
TGTTTGACGGGGCCATCCGGTGTGTGCTAGAGCGAAACCAACGGAAGACA
AAGAAGAAAAAGGGCAAGAACAAAAACTGCGTTATCTCGTGAGGTCACGA
CCTCGAGAGTTAAGTTCGCAGCGGTTTTGGTTTTTGAGTTGAGGGCTTTC
ATGATTTTGGGGCGTTTACTGCGTTGGATCGCCCCCCCCCCCACTCCCCG
TTCCGTTCCCCTGCGTGTGAGTGTTTGCGGGGTTGTGCCTTTTATCTCCC
ACAGCGGTAGTGGGATCGGCGGGTGGTGCGGAGGGAGTACTGCGCGAATT
GTCCACGTAGTCAGTCTCGCGTTGTAGTGCAACCATGCTGTACTTGATCT
CTCACCCCCGCCCGTCGATTCGATGGAATGGGATGGGACGGGACGGAAAG
GGGTATAGCAGCAGTCAAGAGAAGGGCCAGATTGGTGCCTCGATTAATGG
ATCGATGTTTATCGATGTCGACGGTGAGAAGGCGGGCCGGGGCGACGTTA
TTTGGTTGATTTTTTTTTTTTTCGGATCTTTGGTATGGCATACTCGAAAC
TGTCATGTCATGTACACAGTTGCGTTTTGGCGCTGTTTGATTTGTTGGGC
GGGAGAGAGACGATAGGCAGGGCAGGTATGTACAAGTACATGCCGTTTTT
GTTTTCGTGGTACCGAATTGCGACCCAGAGAACTCTTTTGAAGGCTGCCC
CCTCAACCCCCCACCACCCCGTTTTAAAGGTATTTTTATATTACTCCCCC
CCTCCTTGCTCACCCGTGGCGTCGGCGTTGTTGTCTTCTATTGGAGGTTG
TCGGAGAAGGTGAGTGATCTGTCTCCCGTGTTTTCCTTTTAACCTGTTCC
TTGACAACATCAGAGAATAGGAGTCGAGTGTGTGTCTAGCAGTGGAGAGG
TTTTTAAAGGCCAATTACCTCGGAAGGAGTGGTGACTCAGGGGGGAATGA
GATAGCCCGTGGAGGGGGGAGGGGGGCGGAGTCCGGATTTTAAGCGGTTT
ACCTTTCTCTCGAAGAAGGCTTGATAAGGTTGTAGCAAGCGAATTTTTTG
CGTGATGGGTCGACAACGGCTAAGTCGCCGAAGGGTCTATCTCCATACAT
AGTGGCAAGAGAGAAGAGGTAAAAAAGCAGAGGAGGAAGACGAGAGAAGC
GGGAGGGGGTGGAAACATGGTGAGAGCAGCAGTTTTTTATTTGTGTGTGC
TCTTGGCTCTTGGGGGACCCAGGTGGGAGTTGAGGAGGCGTCACCTCGAC
GAACAGCTTTTTTACAAAACCGCTTTTACCCAGGGGGCATTCTTCGTGTG
TGCACGCACAAGCATAGCATGGTACAAGTGAAGTGTGCCTTGCTGAATTT
ATTTTCATTTTCTGTCCTGTCCTTGTTTTGACGTTCAATATGTGTGAAGC
AGCGGCACTTTAACCGGTAGGTAGTGAGTGCACGTCTGCCTGTTTGTACG
CAAATCTTGGGCTGGCTTTGGGTTGATTCCGGATCGTGTTGTCAGGGCAG
CGCCAAAGGCAGAGGCGTGCGAGACGAGTTGGTATGATATGAAAGCAGGA
CCTGTAGAGGTAGACCAAACCACGACGTTTCTGCCCGAGATGAGATTGAG
ACAAAAGTAAGAGTGGTGTTAGTGTCCTGGAGGAATGGGTAGGGGAAGTT
GGCCACACACATTGAACGCGTAGTAACACACAAGAGGTCTAACGGCGGAG
GCACTAGCACAGCAATAGTCTACACGTTGAGCAGCGGCGGTCGGTCGATG
TGCCGTTTTTGCCTCATGTGCTCTTGACAATCCCCTCAGCCCTAACTCCT
TGTATGAGGGATGTAGGGGGGCAAAAGGAAAACGAGAGGCTTGCTCCGTG
GATGGAAGCTTTGCATGAAAAACAGCTGGATGCAAATTGCAATGCGCGCA
GGGCGCAAGGGCCTGCGACGAAGGGTATTTTTGAGATGTGAGATTGAGAT
AACAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig912:8722..17026+

>mRNA_L-elsbetiae_contig912.18150.1 ID=mRNA_L-elsbetiae_contig912.18150.1|Name=mRNA_L-elsbetiae_contig912.18150.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1188bp|location=Sequence derived from alignment at L-elsbetiae_contig912:8722..17026+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGAACATCAAGTGTGTCGTTGTTGGTGATGGAGCTGTGGGTAAGAC
ATGCCTGCTGATCTCCTACACGACAAACGCATTTCCTGGAGAGTACATCC
CAACGGTGTTCGACAACTACAGATGCAGAACATCAAGTGTGTCGTTGTTG
GTGATGGAGCTGTGGGTAAGACATGCCTGCTGATCTCCTACACGACAAAC
GCATTTCCTGGAGAGTACATCCCAACGGTGTTCGACAACTACAGCGCGAA
TGTAATGGTGGATGGGAAGCCGATTAACCTCGGGCTTTGGGATACCGCGG
GGCAGGAGGACTACGACCGACTGCGGCCTCTGAGCTACCCGCAAACACGC
GAATGTAATGGTGGATGGGAAGCCGATTAACCTCGGGCTTTGGGATACCG
CGGGGCAGGAGGACTACGACCGACTGCGGCCTCTGAGCTACCCGCAAACA
GACGTGTTCCTCGTCTGCTTCAGCGTCGTAGACCCCACGAGCTTTCACAA
TGTTAAGCTCAAGTGGATACCCGAGCTACAGCATCACGCCCCGGACGTGT
TCCTCGTCTGCTTCAGCGTCGTAGACCCCACGAGCTTTCACAATGTTAAG
CTCAAGTGGATACCCGAGCTACAGCATCACGCCCCGGGTATCCCCTTTAT
CCTGGTCGGGACAAAGCTCGACCTAAGGGATGACCAGGACGCCTGCAAGA
GACTGGCGGAGAGGCGGCAGACGCCCATTAGCTTCAGCGAGGCGCAGGGG
CTAGCTACGGATCTCGATGCGTATCGCTACCTAGAGTGCAGCGCCCTCAC
GCAGCACGGGTTAAAACAGGGTATCCCCTTTATCCTGGTCGGGACAAAGC
TCGACCTAAGGGATGACCAGGACGCCTGCAAGAGACTGGCGGAGAGGCGG
CAGACGCCCATTAGCTTCAGCGAGGCGCAGGGGCTAGCTACGGATCTCGA
TGCGTATCGCTACCTAGAGTGCAGCGCCCTCACGCAGCACGGGTTAAAAC
AGGTGTTTGACGGGGCCATCCGGTGTGTGCTAGAGCGAAACCAACGGAAG
ACAAAGAAGAAAAAGGGCAAGAACAAAAACTGCGTTATCTCGTGAGTGTT
TGACGGGGCCATCCGGTGTGTGCTAGAGCGAAACCAACGGAAGACAAAGA
AGAAAAAGGGCAAGAACAAAAACTGCGTTATCTCGTGA
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