prot_L-elsbetiae_contig9113.18144.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9113.18144.1
Unique Nameprot_L-elsbetiae_contig9113.18144.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 9.130e-128
Identity = 185/244 (75.82%), Postives = 206/244 (84.43%), Query Frame = 0
Query:    1 MRSLAPLRGMSGQLSVATSSPWVWVSQGVDPTSAIRAPPRERR-SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLF 243
            MRS A  R + GQLSVATSSPWVWV+ GVDP SAI  PPR+R  S R E+V+PAS  HELPTAG PEVAF GRSNQGKSTL+GKLLG+PKLVRASKAPGCT+TVNYFALRE G E+  P A+LVDLPGYGFARESK+AVRGWN  V  YLEGR SSVLRRTFVLVD RHGLQ DDE+MLSFLS   VENMVVLTKV+KASP QL++SLEG FQ+A+ HPAT+P+VHC+SAHKG GM EF NTL+
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAES--PQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLY 242          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.050e-65
Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 0
Query:   18 TSSPWVWVSQGVDPTSAI-RAPP---RERRSFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALR-----ESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLT 246
            T SPWVW  +G+D  SA+ R  P   R  R+ +A F  P   K +LP AG PEVAFCGRSN GKSTL+G L+ + KLVRASK PGCTRTVNYF L      + G E      Y+VDLPGYGFA+   + V+ W + V  ++  R  ++LRRTFVL+D RHG+++ DE+M++ L   GV   +VLTK ++ +   +   +EGV + A RH A  PVVH VSA  G G+ +  +T++ +T
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVT 240          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 169 bits (429), Expect = 2.760e-48
Identity = 91/197 (46.19%), Postives = 127/197 (64.47%), Query Frame = 0
Query:   44 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHA-YLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALR--HPATVPVVHCVSAHKGLGMDE 237
            S    ++ P+   H+LP+AGRPEVAF GRSN GKS+L+  LLG+  L+R SK PGCT T+NY+AL +  G A   HA YL+D+PGYGFA+ +K+  + W   V  YL  R   +LRR FVL+DSR G+Q  D EM+  L+   +   VVLTK +  S  ++ + L  +F V  R  + + +P+VH VSA KGLG+++
Sbjct:   70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAK--GSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLED 264          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: UPI001C99D90F (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Caenibius sp. WL TaxID=2872646 RepID=UPI001C99D90F)

HSP 1 Score: 159 bits (402), Expect = 5.290e-45
Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 0
Query:   44 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDE 237
            S R EF+  A   H LP    PE+AFCGRSN GKS+L+  L G   + R S  PG T+ +N+F + E      P    LVD+PGYGFA+   K V  W + V ++L GRV   L+RT +LVDSRHG++  D EM+  L    V   +VLTK +K    +L K +E   Q A +HPA  PV+H  S+ K +G+DE
Sbjct:   17 SGRVEFLKSAPALHFLPDPEHPEIAFCGRSNVGKSSLLNALTGRRAIARTSVTPGRTQELNFFEVGE------PTVFRLVDMPGYGFAKAPPKVVEKWRALVREFLRGRVP--LKRTLLLVDSRHGIKDVDREMMRMLDEAAVGYRIVLTKADKIKASELAKVVEATAQEARKHPAAFPVIHVTSSEKKMGIDE 202          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A1I7NU75_9HYPH (Probable GTP-binding protein EngB n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NU75_9HYPH)

HSP 1 Score: 159 bits (401), Expect = 8.650e-45
Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 0
Query:   59 LPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLTAGH 249
            LP   RPE+AF GRSN GKS+LI  L+G  +L RAS  PG T+ +N+F   E          +LVD+PGYGFA   K+ V  WN  +  YL GR    L R F+L+D+RHGL+  D+E+L  L G  V   VVLTK +K  P  L K +E   +   +HPA  P +   S+ KGLG +E   T+  L   H
Sbjct:   35 LPPDDRPEIAFAGRSNVGKSSLINALVGQLRLARASNTPGRTQELNFFTDPER-------DLFLVDMPGYGFAEAPKEKVAAWNKVIRAYLAGR--RTLLRVFLLIDARHGLKPPDDEILDLLDGAAVSYQVVLTKADKIKPTDLEKVMERTLKALAKHPAAFPAIIATSSEKGLGFEELRGTIAQLLESH 216          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A3M1JLX5_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JLX5_9PROT)

HSP 1 Score: 158 bits (400), Expect = 1.090e-44
Identity = 87/196 (44.39%), Postives = 111/196 (56.63%), Query Frame = 0
Query:   43 RSFRAE--FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMD 236
            R FR E  FV       +LP  G PE+AF GRSN GKS+L+  L+G  +L R S  PG TR VNYF L ++         +LVDLPGYG+A+  K+ V GWN  + DYL GR S  LRR F+L+DSRHG++  D   L  +    V    VLTK +K    +L K +E       RHPA  P +   SA KG+G+D
Sbjct:   16 RLFRRECTFVKGVVRVADLPDGGLPEIAFAGRSNVGKSSLLNALVGRKQLARTSNTPGRTREVNYFLLGDA--------LWLVDLPGYGYAKAPKREVAGWNRLIEDYLRGRAS--LRRVFLLLDSRHGIKASDRPTLDLMDSSAVSYQAVLTKTDKLKTGELEKVMERTASELARHPAAHPEIIATSAQKGIGLD 201          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A6M8VVN7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VVN7_9PROT)

HSP 1 Score: 158 bits (400), Expect = 1.150e-44
Identity = 84/197 (42.64%), Postives = 115/197 (58.38%), Query Frame = 0
Query:   49 FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCL 245
            FVT A+    LP    PEVAF GRSN GKS+L+  L G   L R S  PG T+ +N+FA+ +           LVDLPGYG+A+ SK AV+ WN+ + DYLE R +  LR  ++L+DSRHGL+  D+E++  L   GV   ++LTK +K    Q+ K +     V  +HPA  PV H  S+HK  G+D+    +F L
Sbjct:   19 FVTGAATVDALPDTSVPEVAFVGRSNVGKSSLLNALTGQASLARTSHTPGRTQQLNFFAVSDGS-------IRLVDLPGYGYAKASKGAVKSWNNLIRDYLEYRPN--LRHVYILIDSRHGLKEGDKEVMDLLDKMGVAYQIILTKSDKIKKEQMDKVVAATEAVLKKHPAAFPVPHSTSSHKRYGVDDMQRAVFKL 206          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A0H4VWE2_9SPHN (Probable GTP-binding protein EngB n=2 Tax=Aurantiacibacter TaxID=2800681 RepID=A0A0H4VWE2_9SPHN)

HSP 1 Score: 157 bits (398), Expect = 2.170e-44
Identity = 89/194 (45.88%), Postives = 110/194 (56.70%), Query Frame = 0
Query:   44 SFRAEFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDE 237
            S R EF+  A     LP    PEVAFCGRSN GKS+LI  L G   + R S  PG T+ +N+F + E      P    LVD+PGYGFA+   K V  W   V  +L GRV   LRRT VLVDSRHGL+  D +M++ L    V   +VLTK +K    +L K    V Q A +HPA  P +H  SA KG+G+DE
Sbjct:   18 SGRVEFLLSAPQLKFLPEPDFPEVAFCGRSNVGKSSLINALTGRRSIARTSVTPGRTQELNFFEVGE------PTEFRLVDMPGYGFAKAPLKVVEKWRKLVRTFLRGRVP--LRRTMVLVDSRHGLKDSDRDMMTILDEAAVGYRLVLTKADKIKASELEKVAALVAQEARKHPAAFPQIHITSAEKGMGLDE 203          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: UPI00082CF604 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Pseudovibrio hongkongensis TaxID=1647556 RepID=UPI00082CF604)

HSP 1 Score: 157 bits (398), Expect = 2.300e-44
Identity = 88/198 (44.44%), Postives = 112/198 (56.57%), Query Frame = 0
Query:   48 EFVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCL 245
            +F+T  +   +LP  G+ EVAFCGRSN GKS+LI  L G   L R S  PG T+ +N+F      GE   P   +VD+PGYG+A   K  V  W S V DYL GR +  LRR F LVDSRHG++++D E  + L    V   VVLTK +K  P QL +  E       + PA  PVV   S+ KG+GMDE   T+  L
Sbjct:   24 DFITSVAEVKKLPPLGKLEVAFCGRSNVGKSSLINALTGRKGLARTSNTPGRTQMLNFF------GEVDAP-IDIVDMPGYGYAEAPKNMVDAWTSLVFDYLRGRAT--LRRVFALVDSRHGIKKNDLEAYAILDKAAVPYQVVLTKADKIKPGQLARMKEATLDALKKRPAAHPVVLATSSEKGVGMDEVRATMLQL 212          
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT)

HSP 1 Score: 157 bits (397), Expect = 3.550e-44
Identity = 92/208 (44.23%), Postives = 112/208 (53.85%), Query Frame = 0
Query:   42 RRSFRAE--FVTPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCTRTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLEGRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASPVQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLTA 247
            RR F A   FV  A+   +LP AG PEVAF GRSN GKS+LI  L G   L R S  PG T+ +N+F L             LVDLPGYG+A+  KK V  WN  + +YL+GR    LRRT VL+D+RHGL+  D  M+  L    V    VLTK +K  P  L   L+   Q   RHPA  P +   SA KG G+ E   TL  L +
Sbjct:   20 RRLFAAPCTFVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDLAG--------RLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGRAP--LRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATLATLAS 217          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9113.18144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI28_9PHAE9.130e-12875.82EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835YYM3_9STRA1.050e-6547.06YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min... [more]
A0A482SLS6_9ARCH2.760e-4846.19Probable GTP-binding protein EngB n=1 Tax=archaeon... [more]
UPI001C99D90F5.290e-4543.81ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A1I7NU75_9HYPH8.650e-4543.46Probable GTP-binding protein EngB n=4 Tax=Hyphomic... [more]
A0A3M1JLX5_9PROT1.090e-4444.39Probable GTP-binding protein EngB n=1 Tax=Alphapro... [more]
A0A6M8VVN7_9PROT1.150e-4442.64Probable GTP-binding protein EngB n=1 Tax=Proteoba... [more]
A0A0H4VWE2_9SPHN2.170e-4445.88Probable GTP-binding protein EngB n=2 Tax=Aurantia... [more]
UPI00082CF6042.300e-4444.44ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A1G7WQA0_9PROT3.550e-4444.23Probable GTP-binding protein EngB n=1 Tax=Roseospi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 47..242
e-value: 1.0E-46
score: 157.0
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 54..246
score: 21.474
NoneNo IPR availableGENE3D3.40.50.300coord: 42..246
e-value: 2.9E-40
score: 139.8
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 42..240
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 42..240
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 66..186
e-value: 4.8E-15
score: 55.6
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 63..248
score: 34.135
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 57..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9113contigL-elsbetiae_contig9113:4083..4832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9113.18144.1mRNA_L-elsbetiae_contig9113.18144.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9113 4081..6159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9113.18144.1 ID=prot_L-elsbetiae_contig9113.18144.1|Name=mRNA_L-elsbetiae_contig9113.18144.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MRSLAPLRGMSGQLSVATSSPWVWVSQGVDPTSAIRAPPRERRSFRAEFV
TPASMKHELPTAGRPEVAFCGRSNQGKSTLIGKLLGSPKLVRASKAPGCT
RTVNYFALRESGGEAAPPHAYLVDLPGYGFARESKKAVRGWNSTVMDYLE
GRVSSVLRRTFVLVDSRHGLQRDDEEMLSFLSGGGVENMVVLTKVEKASP
VQLLKSLEGVFQVALRHPATVPVVHCVSAHKGLGMDEFSNTLFCLTAGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019987GTP-bd_ribosome_bio_YsxC
IPR006073GTP_binding_domain
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase