prot_L-elsbetiae_contig9104.18136.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9104.18136.1
Unique Nameprot_L-elsbetiae_contig9104.18136.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length308
Homology
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BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: A0A2P6NEJ4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NEJ4_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 6.310e-5
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 0 
Query:   73 RSLRKFHRAMGGKRWRRKMGWSAAGIDASQFGLNEFDGVTVGLGGHVDKIRLRDNNLSVNIFLRHPVQFERLNRWSILSSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMIPD 196
            R+L+      GG  W+   GW + G D+ ++      GVT   G ++  + L +NNL+          F+    W+  S   +LT LDVS N L G  P+ L+ LL L  L++S N F+G+IP+
Sbjct:  205 RALQNLFNLSGGATWKNNTGWISQGSDSCKY-----FGVTC-QGAYISSLSLSNNNLNGT--------FD--GSWT--SHFSNLTSLDVSLNDLSGRLPDGLSMLLGLTYLNVSFNQFYGLIPN 310
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BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: A0A2G2YAD7_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YAD7_CAPAN)

HSP 1 Score: 54.7 bits (130), Expect = 8.070e-5
Identity = 41/113 (36.28%), Postives = 54/113 (47.79%), Query Frame = 0 
Query:  131 VNIFLRHPVQFERLNRWSILSSLRHLTVLDVSNN-------------SLRGPFPECLAQLLTLEELDLSHNNFFGMIPDGRVWGRSGLHHLPALRRIRLNDNDLSGALERPAS 230
            + + L     F  +N  S L  L HL  LD+S N             SLRGP PE L+ L ++E L LS N+  G IP       SG+   P+L  +RLN+N  S A+   AS
Sbjct:   26 IELDLHCSQHFGVINSNSSLFQLSHLKKLDLSYNYFYGSHISAKFGRSLRGPIPESLSNLTSIESLFLSQNSLNGTIP-------SGMFSFPSLIYLRLNNNHFSVAMWMSAS 131
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BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Match: UPI000B77515D (probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77515D)

HSP 1 Score: 55.1 bits (131), Expect = 9.690e-5
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:  150 LSSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMI 194
            L  L+HL  LD+SNN LRG  P CLA L +L++LD+S N+F G I
Sbjct:  189 LCELKHLLKLDMSNNDLRGTLPSCLANLTSLQQLDISSNHFIGNI 233
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9104.18136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2P6NEJ4_9EUKA6.310e-533.06Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A2G2YAD7_CAPAN8.070e-536.28Uncharacterized protein n=1 Tax=Capsicum annuum Ta... [more]
UPI000B77515D9.690e-555.56probably inactive leucine-rich repeat receptor-lik... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 148..190
e-value: 1.1E-6
score: 28.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 67..238
e-value: 8.9E-22
score: 79.3
NoneNo IPR availablePANTHERPTHR46662:SF2coord: 151..225
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 151..225
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 116..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9104contigL-elsbetiae_contig9104:1479..6203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9104.18136.1mRNA_L-elsbetiae_contig9104.18136.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9104 1479..6203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9104.18136.1 ID=prot_L-elsbetiae_contig9104.18136.1|Name=mRNA_L-elsbetiae_contig9104.18136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MYIPSPLSRASTPQQDSLSLPPFWPRSMPGLYRPVPQSSVLAYREHHDHD
GEAQDEPFVSGTSDSPSAESEARSLRKFHRAMGGKRWRRKMGWSAAGIDA
SQFGLNEFDGVTVGLGGHVDKIRLRDNNLSVNIFLRHPVQFERLNRWSIL
SSLRHLTVLDVSNNSLRGPFPECLAQLLTLEELDLSHNNFFGMIPDGRVW
GRSGLHHLPALRRIRLNDNDLSGALERPASPRNIVFRDFFGLVSELDRGP
TPNQFIFSERAKSKAVIFCWFADNDVRFWQPRSSICSSVDGDTRLACPPA
TSKLRSNP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf