prot_L-elsbetiae_contig9103.18134.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9103.18134.1
Unique Nameprot_L-elsbetiae_contig9103.18134.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length110
Homology
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BLAST of mRNA_L-elsbetiae_contig9103.18134.1 vs. uniprot
Match: A0A835ZCZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.970e-8
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:   53 LNDVVMGANNFTKCGYIGDFYQNVYLDAMCTDLQGNIEAVAGPALVVVILMFLSF 107
            +N V M A+ ++ CG+IGDFYQ+VYL A+C   QGN+  +A P L V  LM ++F
Sbjct:   78 VNGVFMKADAYSMCGFIGDFYQSVYLGAVCEGFQGNLRDIAVPILFVACLMLVAF 132
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9103.18134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZCZ2_9STRA2.970e-849.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..110
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9103contigL-elsbetiae_contig9103:495..3176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9103.18134.1mRNA_L-elsbetiae_contig9103.18134.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9103 495..3207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9103.18134.1 ID=prot_L-elsbetiae_contig9103.18134.1|Name=mRNA_L-elsbetiae_contig9103.18134.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
MGLIDSNITVITDQQAFMGDLRDEMNETLGSLADTLDSLVVDLDALAEDL
RSLNDVVMGANNFTKCGYIGDFYQNVYLDAMCTDLQGNIEAVAGPALVVV
ILMFLSFCIQ
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