mRNA_L-elsbetiae_contig91.18130.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI) HSP 1 Score: 365 bits (936), Expect = 2.010e-121 Identity = 197/288 (68.40%), Postives = 224/288 (77.78%), Query Frame = 3 Query: 57 PYLHSS----HALAASWCHRAPAASVGCQRNTAKRRPRWLP--LMEVTQDEMG-DVIEPTLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGKPKVAPWKKPEKENDMFYVEEGAGQAPGNDPVMLLAAIGGILGLSYVFL 899 P H S HA AA+W +R R R +P + + Q E G + EP+LE+SLDAIDDV+MDRLPGEGR+KVK+FGAWLDAD+AGRKAGQGNRAAGLIAR GEEL+DQE AEIFYEEA+++MRRRDCD +VALL+KAV LAG DSRRGGEFKLWAAQALQ RN QAV+VLKSLK HRD DVRKV AELLYIAQAP+LALN DFV+FPD S IT+ YD+K++GKPK+APWKK EKE DMFYV E G PGNDPVM LAAI GILGLSY+FL Sbjct: 13 PAFHQSNLQVHAAAAAWT----------RRRVPPTRRRVVPAFMSDPRQGEGGMEFTEPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQEKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFPDTSGITDDYDKKDLGKPKIAPWKKSEKEEDMFYVGEDTGVRPGNDPVMFLAAIVGILGLSYMFL 290
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA) HSP 1 Score: 181 bits (458), Expect = 8.320e-50 Identity = 112/236 (47.46%), Postives = 142/236 (60.17%), Query Frame = 3 Query: 213 TLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPD--VSRITEPYDRKEMGKPKVAPWKKPEKENDMF-----YVEEGAGQAPGNDPVMLLAAIGGILGLSYVFL 899 TLE+ D +DD+ MDR +GRD+VK++GAWLDADIAGR G N+AA L A+A GE L+D+E E+FYEEA+ M + + D A LL +AVA GEDSRRGGEFKLW AQALQ N AV +L+S++ H D DVR V ELLYIA APKL L D V F + I + +D + K P K P K+ + YV P +P L A+ ILG+S + L Sbjct: 54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEALTDREKGEVFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVRTVAKELLYIATAPKLDLEAADLVTFGAGLTAGIDDAFDASRYRELKRGP-KVPYKDGQLLEKKPAYVVREYQPPPEANPAFLAVAVAVILGVSALVL 288
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA) HSP 1 Score: 168 bits (426), Expect = 6.590e-45 Identity = 104/228 (45.61%), Postives = 137/228 (60.09%), Query Frame = 3 Query: 228 LDAIDDVYMDRLPGEGRD-KVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGK-PKVA---PWKKPEKENDMFYVEEGAGQAPGNDPVMLLAAIGGILGLSYVF 896 LD IDD+ M+R P + D +V+V+GAWLD+DIAGRK + L ++ ++GE+L D E AEIF+EEAV M D +V L+++AV AG DSRRGG+F+LW AQ L G+ A+++L+ LK HRD DVR V AE+LYI +AP++ L DFVEFPD S I E Y K PK+ WK+PEKE YV G P D A+ L+Y Sbjct: 86 LDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVASKTKE--LRSKMNKGEQLEDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDEKYAETVWTKGPKIQVARKWKEPEKEE---YVIRSHGPPPKFDLTFGAIALALFAALTYAM 308
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK) HSP 1 Score: 166 bits (419), Expect = 6.860e-44 Identity = 94/176 (53.41%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 216 LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRK 743 LE+ LD IDD+ M R E RD+VKV+GAWLDADIAGRKAG + + A+ GE L+ +E EIF+EEAV M R +VAL+E+AV AG +S RGG F+LW AQA+ GR + A + LK+L H D ++R+V AELLYI +AP++ L +DFVEFPD+S ITE +DRK Sbjct: 82 LEKELDLIDDITMGRSEME-RDQVKVYGAWLDADIAGRKAGDNRK---IKAKLASGERLAPEERGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDMSTITEKFDRK 253
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA) HSP 1 Score: 134 bits (338), Expect = 5.260e-33 Identity = 89/236 (37.71%), Postives = 136/236 (57.63%), Query Frame = 3 Query: 216 LEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAG-EDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEM-------GKPKVAPWKKPEKENDMFYVEEGAGQAPGN-DPVMLLAAIGGILGLSYVF 896 +E+ +D IDD+ M+R GRDKVK++G WLDAD+ GRKAG+ N+AA L +E+ D +AE + V+ M+ + A L +AV L G SRRGGE LW AQA+ G A+++LK L+ H D V KV E+ YI +APKL ++ ++ V+ PD+SR+ + +++M G P V +KKP K++ + +V+E + P DPV + +G ++F Sbjct: 13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFLT------DEVDDDTMAERIFSVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQHMDSSVGKVAGEIRYIFEAPKLEMDPDNMVKIPDLSRLDDWDSKRDMRFATQTTGGP-VREFKKPPKKHSLEWVKEQRNEPPAEIDPVQFCLLLSLAVGSIFLF 240
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7S0TAG8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.980e-23 Identity = 92/229 (40.17%), Postives = 124/229 (54.15%), Query Frame = 3 Query: 270 EGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEE---LSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEP--YDRKEMGK-PKVAPWKKPEKENDMFYVEEGAGQA----PGN--DPVMLLAAIGGILGL-SYVFLG*RDPG 917 E +V++FGA LDA +AG +A +R+A L AD E+ +S ++ AEIFY EAV M R D D AV LL +A + A SRRGG+ +LW AQAL A R Q V++L L H D DVR V EL++I +AP L LN + ++ D+ + Y+R GK K A K +E + VE QA P + DP + +AA +L L S F R PG Sbjct: 61 ENEKQVRMFGAKLDASMAGVRAV--SRSAILAVLADEEEDSAGVSTEQKAEIFYAEAVERMNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYMTI-DLDNFNDDSVYERAPDGKISKRAQTSKLPEEPEYGSVEWALAQAQLEKPSSNFDPALAIAA--SLLCLASLAFF--RQPG 282
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR) HSP 1 Score: 95.1 bits (235), Expect = 4.000e-18 Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 3 Query: 213 TLEQSLDAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQ----------GNRAAGLIARADRGEELSDQEIAE---IFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDV 713 +L +D +DD+ DR P +VK+FGAWLD +AGRKA + G+ A ++ + +S +E E + + +++ + + AL +A + G SR GG+++LW AQ+L AG + A +L+SL+ H D DVRKV EL +I AP L L F E P + Sbjct: 54 SLPDDIDQMDDILFDRAPNNVN-QVKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSI 232
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A7J7ICZ3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICZ3_9RHOD) HSP 1 Score: 93.6 bits (231), Expect = 2.700e-17 Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 279 DKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEP 731 D+ +VFGAWLD + + QG AR G S Q+ AE + + V + A L+ +A ALAG +R GGE+ LW AQAL G+N +A +VL+ L HRD DVR+V LLYI QAP+L L FV+ DV I +P Sbjct: 127 DRSRVFGAWLDNQVLEFERIQG------AARQHPGR--SRQKQAENAFAQGVQELNAGQYAKATDLIFRASALAGHQTRLGGEYLLWLAQALDAQGKNTRAQEVLRRLHYHRDNDVRRVAENLLYILQAPRLRLGPESFVQI-DVEAICDP 268
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: M1VAQ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAQ1_CYAM1) HSP 1 Score: 82.8 bits (203), Expect = 1.300e-13 Identity = 56/157 (35.67%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 231 DAIDDVYMDRLPGEGRDKVKVFGAWLDADIAGRKAGQGNRAAGLIARADRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALAGEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVE 701 D DD+ D D+ +VFGAWLD + R + + A + + QE AE + V + A + +A AL G+ +R GGE+ LW AQAL G+N +A +VL+ L+ H+D DVR+V LL+I QAP+L L FV+ Sbjct: 122 DGYDDISSDSDVDPVLDRGRVFGAWLDNQVL--------RLDRIQSAAMQAPGQTLQERAERAFARGVQALTDGHYATASDAIFQASALPGQQTRLGGEYLLWLAQALDAQGKNARAQEVLRRLQYHKDRDVRQVAESLLFILQAPRLRLGPESFVK 270
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Match: A0A0M0JWQ7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWQ7_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 5.820e-13 Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 282 KVKVFGAWLDADIAGRK--AGQGNRAAGLIARA-DRGEELSDQEIAEIFYEEAVSVMRRRDCDNAVALLEKAVALA--GEDSRRGGEFKLWAAQALQEAGRNKQAVQVLKSLKGHRDLDVRKVGAELLYIAQAPKLALNDNDFVEFPDVSRITEPYDRKEMGKPKVAPWKKPEKENDMFYVEE 815 KV FGA LD D+AG GQ NR + DRG EL M R + AV +A A G R+GG++ ++ AQALQ A R +AV++LK + H D DVRK+ +LY+ QAP+L L +FV P + + R+ + K + P PEK + +YV E Sbjct: 42 KVSAFGARLDDDVAGDNLPVGQQNRRMEEYEKMFDRGNEL----------------MLRGEYKAAVKAFTQATVNAPGGMAGRKGGQYAIYLAQALQAADRKPEAVKLLKKCEAHPDGDVRKIADSVLYVMQAPELKLGAENFVTIPSLQEVDSWGARRTLQKKEDPP---PEKYSLEWYVLE 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig91.18130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig91.18130.1 >prot_L-elsbetiae_contig91.18130.1 ID=prot_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp MSAVQAFLVQGPYLHSSHALAASWCHRAPAASVGCQRNTAKRRPRWLPLMback to top mRNA from alignment at L-elsbetiae_contig91:53570..56799+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig91.18130.1 ID=mRNA_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3230bp|location=Sequence derived from alignment at L-elsbetiae_contig91:53570..56799+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig91:53570..56799+ >mRNA_L-elsbetiae_contig91.18130.1 ID=mRNA_L-elsbetiae_contig91.18130.1|Name=mRNA_L-elsbetiae_contig91.18130.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig91:53570..56799+ (Laminarionema elsbetiae ELsaHSoW15)back to top |