prot_L-elsbetiae_contig9041.18071.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9041.18071.1
Unique Nameprot_L-elsbetiae_contig9041.18071.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length488
Homology
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BLAST of mRNA_L-elsbetiae_contig9041.18071.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.580e-10
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0 
Query:  308 AQEQPRREFPSAVATLSTPQRMRRNS--QPALSFLVESSLSCMLSGQVAT-------TPRRQW-GSPSTPRRQPHSQPTSARSTPARRRQWV------PEQGMMAASLSSCAS-NGGESGRRQVLGEGKLAIDEERRCNELESGAAPG 438
            A E PR  FPSAVATLSTPQRMRR S  Q A SF VE +L    SG  A+       TP+R+W  SPSTPR  P    +SA +TP+RR + +      P +G++ A   + A+ +GGE GRRQ  GE K    EE    E+  G   G
Sbjct:  607 APESPRSGFPSAVATLSTPQRMRRKSYAQRATSFSVEDTLLLASSGLAASGSGTAPATPQRRWEASPSTPRNWP-IMTSSAGNTPSRRHRRIRQRDSSPRRGVVGAGGPAAANRHGGEPGRRQSWGEQKQTEAEE----EIHGGGVSG 749
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9041.18071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGG6_9PHAE3.580e-1045.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 484..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9041contigL-elsbetiae_contig9041:2802..5059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9041.18071.1mRNA_L-elsbetiae_contig9041.18071.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9041 2800..5059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9041.18071.1 ID=prot_L-elsbetiae_contig9041.18071.1|Name=mRNA_L-elsbetiae_contig9041.18071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=488bp
ARSETISERSESFRSESGYGSDQARSTWSSVSAPAAFADRVPPDSSRPLR
SAVSVLPNPNSSFGRASPRPSLERAAAPRHGAPSPSPMPSSMNPRSPARS
FPTRPPTGNATSQATPTAAAGGGVASVTVAAAASSGPSARPVDPGVKTPS
LRLSVSTFPPEWSLHCSRDAEECSNSCSSSSSCGSVSSTNSNDEDHIHSH
RSSEHALNAGSMRSPSFKRPLQSLSPARVSNQSPRRQHLSLAALNQRPQS
PSSSIPWSSTSMLRSPAQIHRRPPSPHPESRGAAAPRTGHTIPHVSRPAA
LLAPPTCAQEQPRREFPSAVATLSTPQRMRRNSQPALSFLVESSLSCMLS
GQVATTPRRQWGSPSTPRRQPHSQPTSARSTPARRRQWVPEQGMMAASLS
SCASNGGESGRRQVLGEGKLAIDEERRCNELESGAAPGGVIDAKQSVGER
LERWADERGAKTSSVSSCASDRVSTRKARGEGELRMDE
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