prot_L-elsbetiae_contig9035.18064.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9035.18064.1
Unique Nameprot_L-elsbetiae_contig9035.18064.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length434
Homology
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 482 bits (1240), Expect = 6.930e-165
Identity = 331/448 (73.88%), Postives = 342/448 (76.34%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRITTDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGEADMDVELLRKGLLAVKLKGEEEGRNKKXXXXXXXXXXXXXXXXXAEGE----------GLIMPAAGRRGKGRGNHDDDEGGEGEQGRRRQGASGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQEKREQAKAERLANEGDGAAAAAAPQRDTREDGG----KAKKPLGCNTCGLTFPDT 434
            MSRAITQPVNQVRLTNVAVVRL KTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDL+KAFGTDNQLEACRIIL+KGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVS + KA      SA PT SAKQQALEVIK+LKEVMPIDRAKMKLRI+TDE + PLKEALGELGVDSFE+ G A     GEVLDFLVDPG+YRDVEEAVRT AGGRCALEVLQLSVQQEGEADMDVEL+RK LLAVKLKGEE      XXXXXXXXXXXXXXXXX              GLIMPAAGRRGKGR    DD                 A  XXXXXXX        XXXXXXXXXXXX             QRQ    QAKAERLA     AA A    +D RE GG    KAK+PLGCNTCGLTFPDT
Sbjct:    1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRISTDEDSTPLKEALGELGVDSFENGGGAAAGSSGEVLDFLVDPGLYRDVEEAVRTAAGGRCALEVLQLSVQQEGEADMDVELMRKELLAVKLKGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIMPAAGRRGKGRPGFSDDYNDXXXXXXXXXXXXXXARGXXXXXXXGGVGKRGGXXXXXXXXXXXXEAAERDIRQQEAQQRQXXXXQAKAERLAEGAGRAAGATERDQDAREQGGGDVGKAKRPLGCNTCGLTFPDT 448          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.160e-96
Identity = 173/270 (64.07%), Postives = 203/270 (75.19%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRITTDEGAAPLKEA-LGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGEADMDVELLRKGLLAVKL 269
            MSRA+ QPV QVRLTNVAVVR+T+TGKRFEIACYRNKVVNWRNRVETDL+EVLQI +VF+NVSKGVLA  KD+ KAFGT+++ E  R IL+KGE+QVSDKER+   ES FRDVATIVSEKCVNP SNRPYTVS +  A      + AP  SAK QALE+I RLKEVMPI RA M LR+T     A   EA L  LGV  FE +           +D LVDPG++R +EEA+R   GG   +EVLQLSVQQEGEAD+D+E  RKG+LA+++
Sbjct:    1 MSRAVFQPVGQVRLTNVAVVRVTRTGKRFEIACYRNKVVNWRNRVETDLNEVLQITTVFQNVSKGVLANKKDMAKAFGTEDEDEIIRYILDKGEVQVSDKERRAQYESAFRDVATIVSEKCVNPHSNRPYTVSMIENAMRDVHFAVAPNKSAKAQALELIPRLKEVMPIARASMLLRVTAPAALAQSVEASLSALGVTHFEKQT---RTEAEHSVDVLVDPGLFRGIEEALRGSGGGAARVEVLQLSVQQEGEADIDLEAARKGVLALQV 267          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A4D9CZ78_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ78_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.090e-77
Identity = 148/267 (55.43%), Postives = 189/267 (70.79%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRIT--TDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGEADMDVELLRKGLL 265
            MSR I QPVNQVRLTNVA+VR+ K GKRFEIACYRNKV++WR  VE D+DEVLQ  ++F NVSKGVLA +KDL+  FG D+     R+ILEKGE   SDKER+   ES++RD+ATIV+ K VNP SNRPYTV+ +         +  PT  AKQQALEVI+RL++VMP++RAKM+L++   T E  A + E +   G+D    E +    G  E +D LVDPG++R V+E VR    G+ AL VL+LSVQQEGEAD+D+E+ RK  +
Sbjct:    1 MSRRIGQPVNQVRLTNVAMVRVHKGGKRFEIACYRNKVLSWRQGVEKDIDEVLQTHAIFLNVSKGVLASSKDLMDCFGQDDVEALLRLILEKGEYHPSDKEREAMHESLYRDIATIVAIKSVNPTSNRPYTVNMILSGMKDIHFAVNPTRGAKQQALEVIRRLQDVMPLERAKMRLKVVCPTTEDLAQVVEGMASFGIDGNTVEAT----GKKEEVDLLVDPGLFRRVDELVR--GKGKGALHVLELSVQQEGEADVDLEIARKAAM 261          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: UPI00158EA940 (ribosome maturation protein SBDS n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158EA940)

HSP 1 Score: 246 bits (629), Expect = 4.210e-76
Identity = 140/254 (55.12%), Postives = 183/254 (72.05%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRIT-TDEGAAPLKEALGELGVDSFESE-GSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGE 252
            MS+  T P NQ+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN +E D+DEVLQ  +VF NVSKG +AK +DL+ AFG DNQ E C+ IL KGE+QVSDKER  AL+S+F+D+ATIVSEKCVNP S RPY VS + KA      S  P  ++KQQALE+I +LK V+P++RA+MK+RI  +++ A  LKE + +L V   E+E    GN+G    +D L+DPG YR+++E +R    G+  +E++ L    EGE
Sbjct:    1 MSKIFT-PTNQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNNLEKDIDEVLQTHTVFINVSKGQVAKKEDLIAAFGNDNQTEICKEILAKGELQVSDKERHSALDSMFKDIATIVSEKCVNPESKRPYPVSMIEKAMKDIHFSVKPNRNSKQQALEIIPQLKAVIPLERAQMKIRIVYSNKTAKKLKEKIVKL-VTKIENECWDGGNLGS---IDCLIDPGKYREIDELIRAETRGQGMVELMSLKEITEGE 249          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A7M7G5I7_NASVI (Ribosome maturation protein SBDS n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7G5I7_NASVI)

HSP 1 Score: 244 bits (624), Expect = 2.290e-75
Identity = 137/253 (54.15%), Postives = 182/253 (71.94%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRI-TTDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGE 252
            MS+  T PVNQ+RLTNVAVVR+ K GKRFEIACYRNKV++WRN++E D+DEVLQ  +VF NVSKG +AK +DL+KAFG D+Q E C+ ILEKGE+QVSDKER  AL+S+F+D+AT V++KCVNP S RPY+VS + KA      S  P  +AKQQALEVI +LK VMP++RA+M+LR+  + + A  L+E + +L       + ++G++     L  L+DPG YR+++E VR    G   LE+L L    EGE
Sbjct:    1 MSKIFT-PVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFMNVSKGQVAKKEDLIKAFGKDDQTEICKEILEKGELQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSGKEARKLREKIVKLTTKVESEDWNSGSLD----LVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGE 248          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A2J7PVY7_9NEOP (Ribosome maturation protein SBDS n=3 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7PVY7_9NEOP)

HSP 1 Score: 244 bits (622), Expect = 4.570e-75
Identity = 139/254 (54.72%), Postives = 182/254 (71.65%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLR-ITTDEGAAPLKEALGELGVDSFESEGSAGNVGGGEV-LDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGE 252
            MS+  T P NQ+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN++ETD+DEVLQ  +VF NVSKG +AK +DL+KAFG D+Q E C+ IL KGE+QVSDKERQ  LES+F+D+AT VS+KCVNP + RPY VS + KA      S  P  +AKQQAL+VI  LK  MP++RA+M++R + + + A  L++ + +L   S ESE    +  GG++ +  L+DPG YR+V+E VRT   G   LE++ L    EGE
Sbjct:    1 MSKIFT-PTNQIRLTNVAVVRMRKGGKRFEIACYRNKVVSWRNKIETDIDEVLQTHTVFTNVSKGQVAKKEDLLKAFGKDDQTEVCKEILAKGELQVSDKERQSQLESLFKDIATTVSDKCVNPETKRPYPVSMIEKAMKDAHFSVKPNRNAKQQALDVIPLLKSTMPLERAQMRIRAVLSGKDARKLRDKVAKLAT-SVESE----DWDGGQLNMVCLIDPGHYREVDEIVRTETKGHGLLELMNLKEVTEGE 248          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A0C9Q0K3_9HYME (Ribosome maturation protein SBDS n=2 Tax=Opiinae TaxID=68883 RepID=A0A0C9Q0K3_9HYME)

HSP 1 Score: 241 bits (616), Expect = 3.630e-74
Identity = 138/253 (54.55%), Postives = 181/253 (71.54%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRIT-TDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGE 252
            MS+  T P+NQ+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN++E D+DEVLQ  +VF NVSKG ++K +DL+KAFGTDNQ E C+ IL KGE+QVSDKER  AL+S+F+D+AT V++KCVNP S RPY VS + KA      S  P  +AKQQALEVI +LK VMP++RA+M+LR+  + + A  L++ + ++   S ESE  A    G   L  L+DPG YR ++E +R+   G   LE++ L    EGE
Sbjct:    1 MSKLFT-PINQIRLTNVAVVRMKKQGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQMSKKEDLLKAFGTDNQTEICKEILSKGELQVSDKERHSALDSMFKDIATTVADKCVNPDSKRPYPVSMIEKAMKDVHFSVKPHRNAKQQALEVIPQLKSVMPLERAQMRLRVVISGKEARKLRDKIVKM-TTSVESENWAE---GTLDLTCLIDPGNYRKIDELIRSETRGTGILELVNLKEVTEGE 248          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: UPI0004CC9EA4 (ribosome maturation protein SBDS n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CC9EA4)

HSP 1 Score: 241 bits (615), Expect = 5.130e-74
Identity = 133/257 (51.75%), Postives = 180/257 (70.04%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRITT-DEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGEADMD 256
            MS+  T P NQ+RLTNVAVVR+ KTGKRFEIACYRNKV++WRN +E D+DEVLQ  +VF NVSKG +AK +DL+ AFG DNQ E C+ IL KGE+QVSDKER  AL+S F+D+ATI+++KCVNP + RPY VS + KA      S  P  ++KQQALE+I +LKEV+P++R++M++R+    + A  L+E +G L +   E+EG      G   L  L+DPG YR++++ VR  A     +E+L L    EG+  +D
Sbjct:    1 MSKIFT-PTNQIRLTNVAVVRMKKTGKRFEIACYRNKVISWRNNLEKDIDEVLQTHTVFSNVSKGQVAKKEDLIAAFGNDNQTEICKEILSKGELQVSDKERHSALDSSFKDIATIITDKCVNPDTKRPYPVSMIEKAMKDVHFSVNPNHNSKQQALELIPKLKEVLPLERSRMRVRVIIHSKNAKKLREKMGPL-MSEVENEGWED---GSLNLTCLIDPGQYREIDKLVRAEAKSAGTVELLDLKEVTEGDKKLD 252          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: A0A8J5QLK8_9HYME (Uncharacterized protein n=3 Tax=Cotesia TaxID=32390 RepID=A0A8J5QLK8_9HYME)

HSP 1 Score: 240 bits (613), Expect = 1.020e-73
Identity = 135/257 (52.53%), Postives = 182/257 (70.82%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRIT-TDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGEADMD 256
            MS+  T P NQ+RLTN+AVVR+ KTGKRFEIACYRNKVV+WRN +E D+DEVLQ  +VF NVSKG +AK +DL+KAFG DNQ E C+ IL KGE+QVSDKER  AL+S F+D+ATI++EKCVNP + RPY VS + KA      S  P  ++KQQAL+VI +LK V+P++RA+M++RI  T++ A  L+E +  L +   E+E       G   L  L+DPG YR++E+ V++ A G   +++L L    EG+  +D
Sbjct:    1 MSKIFT-PTNQIRLTNIAVVRIKKTGKRFEIACYRNKVVSWRNNLEKDIDEVLQTHTVFSNVSKGQVAKKEDLIKAFGNDNQTEICKEILAKGELQVSDKERHSALDSSFKDIATIITEKCVNPDTKRPYPVSMIEKALKDIHFSVNPNHNSKQQALDVIPKLKIVLPLERARMRVRIVVTNKNAKKLREKMETL-ISEVENETWED---GALNLICLIDPGQYREIEKMVKSEAKGAGTVDLLDLKEVTEGDKKLD 252          
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Match: UPI000771B1AA (ribosome maturation protein SBDS n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B1AA)

HSP 1 Score: 240 bits (613), Expect = 1.020e-73
Identity = 131/246 (53.25%), Postives = 177/246 (71.95%), Query Frame = 0
Query:    8 PVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTPSAKQQALEVIKRLKEVMPIDRAKMKLRIT-TDEGAAPLKEALGELGVDSFESEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQEGE 252
            P+NQ+RLTNVAVVR+ K GKRFEIACYRNKVV+WRN++E D++EVLQ  +VF NVSKG +AK +DL+KAFG ++Q E C+ ILEKGE+QVSDKER  AL+S+ +D+AT V+EKCVNP + RPY VS + KA      S  P  +AKQQAL+VI++LK VMP++RA+M+LR+  T + A  L+E + +L       +  +G++     L  L+DPG YR+++E VR+   G   LE+L L    EGE
Sbjct:    7 PINQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNKLEKDINEVLQTHTVFTNVSKGQVAKKEDLIKAFGKEDQTEICKDILEKGELQVSDKERHSALDSMLKDIATTVAEKCVNPETKRPYPVSMIEKAMKDIHFSVKPNRNAKQQALDVIQQLKTVMPLERAQMRLRVLITGKEARKLREKIMKLAAKVESEDWDSGSLN----LICLIDPGQYREIDELVRSETKGHGILELLNLKEVTEGE 248          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9035.18064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB7_9PHAE6.930e-16573.88C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z759_9STRA1.160e-9664.07SBDS protein C-terminal domain-containing protein ... [more]
A0A4D9CZ78_9STRA1.090e-7755.43C2H2-type domain-containing protein n=2 Tax=Monodo... [more]
UPI00158EA9404.210e-7655.12ribosome maturation protein SBDS n=1 Tax=Chelonus ... [more]
A0A7M7G5I7_NASVI2.290e-7554.15Ribosome maturation protein SBDS n=1 Tax=Nasonia v... [more]
A0A2J7PVY7_9NEOP4.570e-7554.72Ribosome maturation protein SBDS n=3 Tax=Termitoid... [more]
A0A0C9Q0K3_9HYME3.630e-7454.55Ribosome maturation protein SBDS n=2 Tax=Opiinae T... [more]
UPI0004CC9EA45.130e-7451.75ribosome maturation protein SBDS n=1 Tax=Microplit... [more]
A0A8J5QLK8_9HYME1.020e-7352.53Uncharacterized protein n=3 Tax=Cotesia TaxID=3239... [more]
UPI000771B1AA1.020e-7353.25ribosome maturation protein SBDS n=1 Tax=Cephus ci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..397
NoneNo IPR availableGENE3D3.30.70.240coord: 173..256
e-value: 1.2E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 1..255
IPR019783Ribosome maturation protein SBDS, N-terminalPFAMPF01172SBDScoord: 16..103
e-value: 1.4E-30
score: 105.2
IPR002140Ribosome maturation protein Sdo1/SBDSTIGRFAMTIGR00291TIGR00291coord: 11..239
e-value: 9.5E-50
score: 167.1
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 100..172
e-value: 1.6E-23
score: 84.5
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 91..164
IPR018978Ribosome maturation protein SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 109..230
e-value: 7.7E-23
score: 80.7
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 1..96
e-value: 2.5E-40
score: 138.4
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 12..96
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 1..255
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 46..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9035contigL-elsbetiae_contig9035:1048..7485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9035.18064.1mRNA_L-elsbetiae_contig9035.18064.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9035 1005..7485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9035.18064.1 ID=prot_L-elsbetiae_contig9035.18064.1|Name=mRNA_L-elsbetiae_contig9035.18064.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=434bp
MSRAITQPVNQVRLTNVAVVRLTKTGKRFEIACYRNKVVNWRNRVETDLD
EVLQIESVFENVSKGVLAKNKDLVKAFGTDNQLEACRIILEKGEMQVSDK
ERQVALESVFRDVATIVSEKCVNPASNRPYTVSHVGKAGGGGAASAAPTP
SAKQQALEVIKRLKEVMPIDRAKMKLRITTDEGAAPLKEALGELGVDSFE
SEGSAGNVGGGEVLDFLVDPGMYRDVEEAVRTVAGGRCALEVLQLSVQQE
GEADMDVELLRKGLLAVKLKGEEEGRNKKGRGGKGGAASVGGASAGAEGE
GLIMPAAGRRGKGRGNHDDDEGGEGEQGRRRQGASGGARGEGKGAGEGGV
GKRGGKKGKGARRREKEEAAERDVRQQEAQQRQEKREQAKAERLANEGDG
AAAAAAPQRDTREDGGKAKKPLGCNTCGLTFPDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019783Ribosome_mat_SBDS_N
IPR002140Sdo1/SBDS
IPR037188Sdo1/SBDS_central_sf
IPR018978Ribosome_mat_SBDS_C
IPR036786Ribosome_mat_SBDS_N_sf
IPR039100Sdo1/SBDS-like
IPR018023Ribosome_mat_SBDS_CS