prot_L-elsbetiae_contig903.18055.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig903.18055.1
Unique Nameprot_L-elsbetiae_contig903.18055.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
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BLAST of mRNA_L-elsbetiae_contig903.18055.1 vs. uniprot
Match: D7FIV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV6_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.460e-10
Identity = 107/287 (37.28%), Postives = 137/287 (47.74%), Query Frame = 0 
Query:    9 LVLAWSSMG-CGSAEVVLEAASRQQRDLLAVTLETLVAGL---GGEDSSARASGASG---------DIAEDGRDDGDGLRWHDERSGSCSSDADEAYTS----------DXXXXXXXXXXAEFDRVASAAAAAVTGSRRTTLGPHETGVTPAAHSSDGDSELLFSPANGIASARRDDLSCSVTRRHQAHRKTAQQRSSSDSRPGLHRRGMSFSPGEAVPLGRVPV-LARSRTAGAAGLGGXXXXXXXXXXXXXEQDARVRREDAMARLLAVYDRARDESQAAAWRLG 271
            LVL+W S G  G ++++L AASR+ RDL+ +TLETLV GL   GG+  SA   G            +I   GR+         E++GS  SDA+ A  +           XXXXXXXX  A FD   +  A++    R   L                  E LFS     ASA R                ++++R+S     GLHRRG+SFS   A     V   L R+RT GA+ +G              E +AR RRE+AMARLLAVYDRARDE+ AAA RLG
Sbjct:  119 LVLSWGSAGEIGPSKLILAAASRELRDLVMLTLETLVDGLQGGGGDHVSAAGEGVGSTAAPHVVQQEIQVGGREG--------EQAGS--SDAEPAAPTATXXXXXXXXXXXXXXXXXVLARFDNDCADPASSAIRHRGGDL-----------------RERLFSSDAAAASAER----------------SSRRRASL----GLHRRGVSFSSAGADKAASVVHGLERARTVGASVIG---RESDAGLVLEQELEARRRREEAMARLLAVYDRARDETHAAACRLG 355
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BLAST of mRNA_L-elsbetiae_contig903.18055.1 vs. uniprot
Match: A0A6H5LDY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDY4_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.410e-7
Identity = 45/84 (53.57%), Postives = 50/84 (59.52%), Query Frame = 0 
Query:  189 GLHRRGMSFSPGEAVPLGRVPV-LARSRTAGAAGLGGXXXXXXXXXXXXXEQDARVRREDAMARLLAVYDRARDESQAAAWRLG 271
            GLHRRG+SF    A     V   L R+ T GA+ +G              EQ+AR RRE AMARLLAVYDRARDE QAAA RLG
Sbjct:  396 GLHRRGVSFGSAGADKAASVDRGLERASTVGASVIG---RDRDAGLVLEHEQEARRRREQAMARLLAVYDRARDELQAAACRLG 476
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig903.18055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIV6_ECTSI1.460e-1037.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LDY4_9PHAE1.410e-753.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig903contigL-elsbetiae_contig903:28637..29449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig903.18055.1mRNA_L-elsbetiae_contig903.18055.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig903 28608..29449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig903.18055.1 ID=prot_L-elsbetiae_contig903.18055.1|Name=mRNA_L-elsbetiae_contig903.18055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
MPGVEAYGLVLAWSSMGCGSAEVVLEAASRQQRDLLAVTLETLVAGLGGE
DSSARASGASGDIAEDGRDDGDGLRWHDERSGSCSSDADEAYTSDDDEAA
AALMLAEFDRVASAAAAAVTGSRRTTLGPHETGVTPAAHSSDGDSELLFS
PANGIASARRDDLSCSVTRRHQAHRKTAQQRSSSDSRPGLHRRGMSFSPG
EAVPLGRVPVLARSRTAGAAGLGGGSEAALLQQQEEQEQDARVRREDAMA
RLLAVYDRARDESQAAAWRLG
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