prot_L-elsbetiae_contig9027.18049.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9027.18049.1
Unique Nameprot_L-elsbetiae_contig9027.18049.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
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BLAST of mRNA_L-elsbetiae_contig9027.18049.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.550e-6
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:   96 GRVMLDDGDGTKSYITPALARGTSHGALSSLDDHQAIVRPPLGQSASQH----------------GGKRLLGH 152
            G + LDDGDG ++ +T    RG SHGA+S+LDD+QAIVRP  G+ +S+                 GG  LLGH
Sbjct:  712 GSITLDDGDGVRTKMT----RGASHGAMSTLDDNQAIVRPVSGRVSSRFAARLGNDSNAGRRSMVGGDALLGH 780
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BLAST of mRNA_L-elsbetiae_contig9027.18049.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 9.440e-6
Identity = 33/73 (45.21%), Postives = 40/73 (54.79%), Query Frame = 0 
Query:   96 GRVMLDDGDGTKSYITPALARGTSHGALSSLDDHQAIVRPPLGQSASQH----------------GGKRLLGH 152
            G V LDDGDG ++ +T    RG SHGA+S LDD+QAIVRP  G+ +S                  GG  LLGH
Sbjct:  619 GSVTLDDGDGLRTKMT----RGASHGAMSPLDDNQAIVRPVSGRVSSHFAARLGNNSNAGRRSTIGGDALLGH 687
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9027.18049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0H9_9PHAE3.550e-643.84Na_H_Exchanger domain-containing protein n=1 Tax=E... [more]
D7G372_ECTSI9.440e-645.21Sodium/hydrogen exchanger family n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9027contigL-elsbetiae_contig9027:5032..7776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9027.18049.1mRNA_L-elsbetiae_contig9027.18049.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9027 5030..7776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9027.18049.1 ID=prot_L-elsbetiae_contig9027.18049.1|Name=mRNA_L-elsbetiae_contig9027.18049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
GCGRQPGHRLRQRELRRVGQQYRAHAHHGGDSCSRRGRREGEESGVPWTS
QPNERARQVEHLPRGQQQQRRHRGELPTAAAGDAANHSRRTSGVGGRVML
DDGDGTKSYITPALARGTSHGALSSLDDHQAIVRPPLGQSASQHGGKRLL
GH
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