prot_L-elsbetiae_contig9026.18048.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9026.18048.1
Unique Nameprot_L-elsbetiae_contig9026.18048.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length489
Homology
BLAST of mRNA_L-elsbetiae_contig9026.18048.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 8.750e-91
Identity = 186/289 (64.36%), Postives = 212/289 (73.36%), Query Frame = 0
Query:  122 EDDISSDGN-TADGNPEENQD---AGLTGPSEGAEATTAGR-AAAEKPYTVVFHGRRLGIQLREVHKIPIVGGLQGYDPDGTQDXXXXXXXXXXX--EGMDGLPIEVSPEDSAFDALSLARLGTVGGGGA-GAGTDELQTIYGGSGXXXX-VGTETSSMRDSQSEYDVTVKCIVQCSQLFGEGVKKLWRWKPSALTASGSAATVTTDEGTTTTALGAAGAVAVDSTTAVSAFMRGLSLRLGLGENTRHVRVSYLDMEVGDGEGDYVSLDAEAWDDFLESRFKRLSVSLD 401
            E+D+SS+ N + DG+   + D   AG+T P+    A TAGR AAAEKPYTV+FHGRRLGIQLRE+HKIPIVGGLQGYDPDGTQD             E +DGLP+EVSPE SAFD LSLARLGT+GGG A G G D+LQTIYGGSG     +GTETSSM DSQS+YDVTVKCIVQCSQLFGEGVKKLWRWKP+   ++  AA                     D + AVSAFM+GLS+RLGLGE+   VRVSYLDMEVGDGEG+YVSLD EAW DFLESRFKRL V++D
Sbjct:  535 EEDVSSEENKSGDGDGGGSGDRPVAGVTDPAAAEGALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSRGEDGEDDDGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSAAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKPAPAASNDDAA---------------------DPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGDGEGEYVSLDVEAWGDFLESRFKRLLVTVD 802          
BLAST of mRNA_L-elsbetiae_contig9026.18048.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 7.390e-90
Identity = 178/265 (67.17%), Postives = 197/265 (74.34%), Query Frame = 0
Query:  142 AGLTGPSEGAEATTAGR-AAAEKPYTVVFHGRRLGIQLREVHKIPIVGGLQGYDPDGTQDXXXXXXXXXXX--EGMDGLPIEVSPEDSAFDALSLARLGTVGGGG-AGAGTDELQTIYGGSGXXXX-VGTETSSMRDSQSEYDVTVKCIVQCSQLFGEGVKKLWRWKPSALTASGSAATVTTDEGTTTTALGAAGAVAVDSTTAVSAFMRGLSLRLGLGENTRHVRVSYLDMEVGDGEGDYVSLDAEAWDDFLESRFKRLSVSLD 401
            AG+T P+    A TAGR AAAEKPYTV+FHGRRLGIQLRE+HKIPIVGGLQGYDPDGTQD             E +DGLP+EVSPE SAFD LSLARLGT+GGG  AG G D+LQTIYGGSG     +GTETSSM DSQS+YDVTVKCIVQCSQLFGEGVKKLWRWKP+   +S  AA                     D + AVSAFM+GLS+RLGLGE+   VRVSYLDMEVG GEG+YVSLD EAW DFLESRFKRL V++D
Sbjct:  534 AGVTDPAAAEVALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSRGEDGEDDGGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSIAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKPAPAASSDEAA---------------------DPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGGGEGEYVSLDVEAWGDFLESRFKRLLVTVD 777          
BLAST of mRNA_L-elsbetiae_contig9026.18048.1 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.580e-7
Identity = 53/147 (36.05%), Postives = 64/147 (43.54%), Query Frame = 0
Query:  279 DVTVKCIVQCSQLFGEGVKK------------------LWRWKPSALTASGSAATVTTDEGTTTTALGAAGAVAVDSTTAVSAFMRGLSLRLGLG-------ENTRHVRVSYLDMEVGDGEGDYVSLDAEAWDDFLESRFKRLSVSL 400
            D TVKCIVQC+ +FG GVKK                  LWRWKP              DE              ++    +S FM GL+ RL LG       E    + ++YLD E    E + VSLD EAW DFL  R KRL V +
Sbjct:  631 DPTVKCIVQCAAIFGLGVKKFQSIVWRATAVFGPGIKELWRWKPGC----------DQDE--------------LEGPKGLSLFMLGLARRLALGGDDAEAKEAVERLTLTYLDPE----EREQVSLDLEAWPDFLSLRSKRLVVEM 749          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9026.18048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN4_ECTSI8.750e-9164.36VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV84_9PHAE7.390e-9067.17VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQM7_9STRA4.580e-736.05VPS9 domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9026contigL-elsbetiae_contig9026:234..6699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9026.18048.1mRNA_L-elsbetiae_contig9026.18048.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9026 233..6699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9026.18048.1 ID=prot_L-elsbetiae_contig9026.18048.1|Name=mRNA_L-elsbetiae_contig9026.18048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=489bp
DVVHAKWLEQLRVVAQRDRKDDKDKGDSSSSSKTNKKRARDGKGGAAGAA
EESKRPLTTGAAAAAAAVDETDAAEAPRKSRSDSTASSVSATAAVVTAAA
AKKDVVEASSKASSSLGLVGGEDDISSDGNTADGNPEENQDAGLTGPSEG
AEATTAGRAAAEKPYTVVFHGRRLGIQLREVHKIPIVGGLQGYDPDGTQD
GREDGEDDDDDEGMDGLPIEVSPEDSAFDALSLARLGTVGGGGAGAGTDE
LQTIYGGSGAGGGVGTETSSMRDSQSEYDVTVKCIVQCSQLFGEGVKKLW
RWKPSALTASGSAATVTTDEGTTTTALGAAGAVAVDSTTAVSAFMRGLSL
RLGLGENTRHVRVSYLDMEVGDGEGDYVSLDAEAWDDFLESRFKRLSVSL
DADTTPAPSASAAADGAASKGPGGAAGDASVAAAAAGAGAGATPTSECKQ
PEPKDRLSEERLKGGGGGVAQPADGTPSASAEMSDEDDE
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