prot_L-elsbetiae_contig9000.18023.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9000.18023.1
Unique Nameprot_L-elsbetiae_contig9000.18023.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length395
Homology
BLAST of mRNA_L-elsbetiae_contig9000.18023.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 5.060e-37
Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 0
Query:   91 EAVVAARADQSAERKQMARGLLQTIRDMGTRQSASHRWLAREVAGLTIRIPGHAVLLPPREDEDSELTDTEREASNWIRRLNDWRAHGKRTGKGKAWKEYRLFFLCGHDRSLAECGSGGKGYRIKCPRKWMKSSLPFAKALLVVVNMALKTTAGLGIPADDIASFGGKDWGELLSSTVEDAAEATIDAACSAVGETLDERSAVADSVDQTAPAHDSHGVGGHSNASSLLPTPREA--REQLETLVRDLSVKGLKKSSAADHPPFLCFDTTMQLVDKEGLGEEWSWVRTKNVPAF 382
            E V+++ +D  A    +   ++  +RD    +    R + ++VA L   IP    +LP  E     L + +R    W   L +W   GKRTGKG A ++ R+FFLC +DRSLAECG GG+GY +     W K ++PFA+    + ++AL+   GL IP  D  +  G   G  LS   E++  + I++  S  GE LD     A+ + Q A AH          A    P+P +    E L+ +++   V G++  S     PF  FD  M LVD+ G GEEW+WVRTKN+  F
Sbjct:  973 ETVISSDSDHKA----LLERIVDVLRDQMNVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLD--GGRAEGLPQGAGAH---------GAQQGWPSPVQGFTYETLKEVIKSFEVDGMRGRS-----PFPSFDAKMHLVDRGGRGEEWAWVRTKNIDQF 1246          
BLAST of mRNA_L-elsbetiae_contig9000.18023.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 9.260e-28
Identity = 103/333 (30.93%), Postives = 158/333 (47.45%), Query Frame = 0
Query:   77 DVQQIVDESSQRIV---EAVVAARADQSAERKQMARGLLQTIRDMGTRQSASHRWLAREVAGLTIRIPGHAVLLPPREDEDSELTDTEREASNWIRRLNDWRAH----------GKRTG---------KGKAWKEYRLFFLCGHDRSLAECGSGGKGYRIKCPRKWMKSSLPFAKALLVVVNMALKTTAGLGIPADDI-ASFGGKDWGELLSSTVEDAAEATIDAACSAVGETLDERSAVADSVDQTAPAHDSHGVGGHSNA-SSLLPTPREAREQLETLVRDLSVKGLKKSSAADHPPFLCFDTTMQLVDKEGLGEEWSWVRTKNVPAFTAE 385
            DV + ++E++ ++V   E VV A    +A       GL  T RD+          +AREVA L   IP    +LP R   D+ L++++R    W   L +W A            ++T          +G   +E RLFFLCG D+SLAECG  G+GY +K    W++ + P AK  L + ++ALK   GL +  D   A+FG     E +S+ VEDA  A I+   S  G  LD        +  + P+      G   +   +L+P      ++L+ +++   V   ++    D   +  FDTTM +VD+ G G EW+WVR +N+  F  E
Sbjct:  836 DVNRKLNETTMKVVAGVEQVVQANLSNAA-----VAGLRPTERDILV-------GVAREVAILRWPIPRFVCVLPAR---DTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTS---EDMSAFVEDALSAGIEGTTSKAGNRLDR-------LQNSGPSERLPHAGVRGDGMQTLIPLEGFDYDKLKEVIKSFEVDRTQR----DGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQFVGE 1139          
BLAST of mRNA_L-elsbetiae_contig9000.18023.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.660e-5
Identity = 33/85 (38.82%), Postives = 45/85 (52.94%), Query Frame = 0
Query:  188 KEYRLFFLCGHDRSLAECGSGGKGYRIKCPRKWMKSSLPFAKALLVVVNMALKTTAGLGIPADDIASFGGKDW--GELLSSTVED 270
            K+  L FLC  D +   CG GGKGYR +  R W+K   P  +  LV   +ALK T+GL +   D      KD   GEL+  T+++
Sbjct: 1356 KDMTLHFLCPVDMTKVPCGYGGKGYRFRETRGWVKKISPVLQVALVTAKVALKATSGLDVDLSDFLKDV-KDGLVGELVDPTLDE 1439          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9000.18023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FU35_ECTSI5.060e-3734.35LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUH6_ECTSI9.260e-2830.93LRR-GTPase of the ROCO family, incomplete sequence... [more]
D8LCS7_ECTSI1.660e-538.82LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9000contigL-elsbetiae_contig9000:209..2117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9000.18023.1mRNA_L-elsbetiae_contig9000.18023.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9000 204..2461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9000.18023.1 ID=prot_L-elsbetiae_contig9000.18023.1|Name=mRNA_L-elsbetiae_contig9000.18023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp
MMFQRITSRISANLSTGGTPNTISPEVQGRSTDDQVAQQLKEISRSITSA
VGRPVPDQELKAWTANLRNLRLRTREDVQQIVDESSQRIVEAVVAARADQ
SAERKQMARGLLQTIRDMGTRQSASHRWLAREVAGLTIRIPGHAVLLPPR
EDEDSELTDTEREASNWIRRLNDWRAHGKRTGKGKAWKEYRLFFLCGHDR
SLAECGSGGKGYRIKCPRKWMKSSLPFAKALLVVVNMALKTTAGLGIPAD
DIASFGGKDWGELLSSTVEDAAEATIDAACSAVGETLDERSAVADSVDQT
APAHDSHGVGGHSNASSLLPTPREAREQLETLVRDLSVKGLKKSSAADHP
PFLCFDTTMQLVDKEGLGEEWSWVRTKNVPAFTAEASGGGGQPL*
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