prot_L-elsbetiae_contig90.18016.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig90.18016.1
Unique Nameprot_L-elsbetiae_contig90.18016.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: D7FYS9_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS9_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.360e-65
Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 0
Query:    1 MATPQGTGPIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEWKEKEDL 115
            MATP GTGPIVQDVAPKGGFPKVQI+RQLPSGRGPRGSVV GLV +TM +GYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFN QLQKGLH+SLN WKE+E+L
Sbjct:    1 MATPVGTGPIVQDVAPKGGFPKVQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEEL 115          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A061QUA6_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUA6_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 1.370e-18
Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEW 109
            P++QD  P GGFP ++IAR++P+  GP G+ +FG+ AL M+ G+Y +GQ N  RRA++ E+   R AL+P LQAEEDR+ + AK+  ++ +  +   ++ W
Sbjct:   19 PVLQDGPPPGGFPSIRIARRIPN-TGPSGAAIFGVGALVMSYGFYLVGQTNIQRRADKAEREHVRRALVPFLQAEEDRRYLKAKKQLLEKEASIMKDVDGW 118          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A5J4XG14_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG14_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 2.730e-18
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEWKEKEDL 115
            P++QD  P GGFP V+ AR++PS  GP G  +F + A  M  G+ K+GQ N  RRA + EK+ AR A+MP+LQAEEDR+ V A    ++ +K L  ++  +K  E L
Sbjct:   19 PVLQDGPPPGGFPSVRYARRIPS-TGPAGFTLFAVTASIMAYGFIKVGQTNHERRAAKAEKKAARFAIMPILQAEEDRRYVQANEAFIRKEKELMKNVPGYKAGEQL 124          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A7S3CKE5_9SPIT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CKE5_9SPIT)

HSP 1 Score: 81.6 bits (200), Expect = 2.240e-17
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 0
Query:   10 IVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKR 93
            ++QD  P GGFP V+IAR++P+  GP G+ VFG+ AL ++ G+Y +GQ N  +RA++ EK   R AL+P+LQAEEDR+ V AK+
Sbjct:   22 LLQDGPPAGGFPSVRIARRIPN-TGPSGAAVFGVGALVISYGFYIVGQTNIQKRADRAEKEAVRRALVPVLQAEEDRRFVAAKK 104          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A087SFV8_AUXPR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFV8_AUXPR)

HSP 1 Score: 81.3 bits (199), Expect = 3.010e-17
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEWKEKEDL 115
            PIVQD  P GGFP V+ AR+LP+  GP G  +FG+ A  M  G+Y++GQ N  RR E+ EK  +R AL+P LQAEEDR+ V A     + QK +  +  E+K +E +
Sbjct:   19 PIVQDGPPPGGFPAVRYARRLPNS-GPAGFTLFGVGAAVMAYGFYQVGQGNIKRRDEKREKLDSRRALVPFLQAEEDRRWVAANEEFQKKQKEIMKNHPEYKAEESV 124          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A2P6VLY9_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLY9_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 5.720e-17
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEW 109
            P+VQD  P GGFP  + AR++PS  GP G  +F   A  M  G+YK+GQ+N+ RRA++     AR AL+P LQAEEDR+ V A +  +  Q+G+  ++ E+
Sbjct:   19 PVVQDGPPPGGFPSFRYARRVPS-TGPSGITLFAAGAAVMAFGFYKVGQSNRERRAQKAANLAARAALVPFLQAEEDRRWVNANQTFLARQEGIMKNVPEY 118          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: I0YQ01_COCSC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YQ01_COCSC)

HSP 1 Score: 79.0 bits (193), Expect = 2.400e-16
Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEW 109
            P++QD  P GGFP ++ AR++PS  GP G  +F + A  M  G+Y++G+ N+ RRA + EK   R A+ P+LQAEEDR+ V AK+ +V+ +  +   +  W
Sbjct:   19 PVLQDGPPPGGFPSIRYARRIPS-TGPTGFTLFAVGAAVMAFGFYRVGEFNRYRRALKAEKMTMRTAIYPVLQAEEDRRWVQAKKQSVENEAKIMKDVPGW 118          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A2P6U3A2_CHLSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3A2_CHLSO)

HSP 1 Score: 79.0 bits (193), Expect = 2.400e-16
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLA 91
            PIVQD  P GGFP ++ AR++PS  GP G  +F + A  M  G+YK+GQ+N+ RR E+ E   AR AL+P LQAEEDR+ V A
Sbjct:   19 PIVQDGPPPGGFPAIRYARRVPS-TGPSGFTLFAVGAAVMAYGFYKVGQSNRQRRGEKAEHFGARAALVPFLQAEEDRRWVNA 100          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A388KNK5_CHABU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNK5_CHABU)

HSP 1 Score: 75.5 bits (184), Expect = 5.500e-15
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    9 PIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEWK 110
            P++QD  P GGFP ++ AR++P+  GP G VVF + A  ++ G Y++GQ N  RRA + EK  AR+A++P++QAEED +   A++  +  ++ +  ++  WK
Sbjct:   19 PVLQDGPPPGGFPAIRYARKIPN-TGPSGVVVFSIAAAVISYGMYQVGQGNLHRRALKKEKMEARMAILPLIQAEEDVRYAKARQKALAEEEKIMQNVPGWK 119          
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Match: A0A5B8MKM3_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKM3_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 7.240e-15
Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   12 QDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTIGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNEWK 110
            QD  P GGFP ++  R++P+  GP G  +FG+ A+ M  G+YK+GQ N  RR  + EK  AR+ +MP+LQAEED + V A++    L+  +   +  WK
Sbjct:   22 QDGPPPGGFPAIRYGRKIPNS-GPSGVAIFGIGAIIMAYGFYKVGQTNHKRRDWKREKLQARMNIMPVLQAEEDLRFVAAQKKAWDLEAKIMKDVPNWK 119          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS9_ECTSI1.360e-6589.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A061QUA6_9CHLO1.370e-1842.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J4XG14_9CHLO2.730e-1844.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3CKE5_9SPIT2.240e-1751.19NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A087SFV8_AUXPR3.010e-1746.73NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6VLY9_9CHLO5.720e-1744.55NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
I0YQ01_COCSC2.400e-1641.58NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6U3A2_CHLSO2.400e-1653.01NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A388KNK5_CHABU5.500e-1539.22NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5B8MKM3_9CHLO7.240e-1541.41NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 10..110
e-value: 3.9E-21
score: 75.4
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 9..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..116
NoneNo IPR availableTMHMMTMhelixcoord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig90contigL-elsbetiae_contig90:49115..50362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig90.18016.1mRNA_L-elsbetiae_contig90.18016.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig90 48539..50388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig90.18016.1 ID=prot_L-elsbetiae_contig90.18016.1|Name=mRNA_L-elsbetiae_contig90.18016.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
MATPQGTGPIVQDVAPKGGFPKVQIARQLPSGRGPRGSVVFGLVALTMTI
GYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQK
GLHDSLNEWKEKEDLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19