prot_L-elsbetiae_contig90.18011.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig90.18011.1
Unique Nameprot_L-elsbetiae_contig90.18011.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1089
Homology
BLAST of mRNA_L-elsbetiae_contig90.18011.1 vs. uniprot
Match: D7FYS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS2_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 8.340e-163
Identity = 413/682 (60.56%), Postives = 473/682 (69.35%), Query Frame = 0
Query:  462 MKAELSEFQGTRHARSRLKETVSREWAQQEYRAGIAMGQVDRSVTEVEFIRRRLEGGTLYALLAEESSNYLHVGPFTDADLELLGTSFAKTQAFKELPPAASTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP--------------GVTSWADRLRDFQIDVPASAAYDELASNPDSNPDARAQGRGGSVAE-----VGAEQEQQG--EQDQEVSSWDGVGVDATTVIHHRRQFDARCKAYEALSNASRTDKTTGLLDRTHRLHQDHASIIVAKRGTLEGTLQNVRQQLHGREEQLRHVRIEQRAVNPLDAALVAGLNESEAAIMTRVTEKRVQMAMIIEEANKVVQWEQTTELARREAMQHAADMHGHGGGYAVGAQHERNDLVQAMMSQKVDIMLLSTFCKLRGPWLAPPGNVREGRSLPSQESTEINPNSGTPPASDSDSGTARD--AAGDQASSRSSANGEGRAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------EGPV---------ELGKRQIQLRLLPPSEGGKNREK-TGSPATATPAALASPQEAQHSEEGGRRGDEASG-EVTDAMEEVTSRLGDG---GSSSLAT----GGKEAVMAQLAEAQEEAKARE---VDEDAVGEDGPAPMDVSAPAVFSTGSGSESGD 1089
            MK  L EFQGTR+ARSRLK+T++ EWA+QEYR GIA+GQVDR +TE+EF+RRR+EGG+LYALL +ES +YL VGPFTDAD+ELLG SFA+ QA KELPP A+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +               GV SWADRLRDFQID+PASA YD LAS+           RGG  A+     V AE  Q+G  +Q+ + S+WDG+GVDA TVI HRRQFD RC+AYEAL+ ASR DKT GLL++THRL QDHA+I+ AKR TLEGTLQNVRQQL+GRE+QLRHV +EQR VNPLD  +VAGLNESEAAIMTRV EK+VQMAMII+EANKVVQWEQT ELARREAM HAADMHGHGGG+A G+  ERN+LVQ+MMSQKV+IMLLSTFCKLRGPWLAP G VR  RS+    +       G+  A+  + G   D   A   + S S +  E  A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           GP          + GKRQI+LRLLPPSE    +EK  G P           Q  Q +E GG  G   +G   T A E   SR GD    G SS+A     GGKEA MA LA A+     RE   VD  + G DGPAPMD +A    ST SG+E GD
Sbjct:    1 MKTVLPEFQGTRYARSRLKQTLAHEWARQEYRTGIALGQVDRGMTEMEFVRRRVEGGSLYALLEQESRDYLRVGPFTDADVELLGMSFAQAQASKELPPPAAAPKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGKDAAAAKAGAAAEGGVASWADRLRDFQIDIPASATYDGLASDSS---------RGGGAADRTDGQVVAEAAQKGGSQQEDDASAWDGIGVDAATVIRHRRQFDLRCRAYEALNTASRNDKTNGLLEKTHRLRQDHAAIVAAKRVTLEGTLQNVRQQLNGREDQLRHVHMEQRGVNPLDTTVVAGLNESEAAIMTRVAEKKVQMAMIIDEANKVVQWEQTAELARREAMHHAADMHGHGGGFAPGSAKERNELVQSMMSQKVNIMLLSTFCKLRGPWLAPSGYVRGKRSVSDGAA-------GSAVAAAEEKGAEPDPRTAVVSSPSLSVSTAENTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDGAGSGPAAGXXAGVEAKPGKRQIKLRLLPPSEAEPKKEKGDGDPGQDAHRQ----QPGQQAEGGGDAGAACTGPSYTVAAEGTASRAGDSSGDGFSSMAAVMAMGGKEAAMASLAGARGTGSVREQDGVDAGSKGGDGPAPMDATA----STASGNEGGD 658          
BLAST of mRNA_L-elsbetiae_contig90.18011.1 vs. uniprot
Match: D7FYS1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 8.140e-41
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0
Query:   33 MVLKHAQVFGDERLKRGAYLAGLAEGPSLAQDLGLSPKDRLICVEGLDVKTLPFDRIVGLIRNATFPLTLVWSRQRKAGAAVSAK 117
            MVLKHAQVFG+ERLKRGAYLAGLAEGPSLAQDLGLSPKDRLI VEGLDVKTLPFDRIVGLIR ATFPLTLVWSRQRKAG A ++K
Sbjct:    1 MVLKHAQVFGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRIVGLIRKATFPLTLVWSRQRKAGIAATSK 85          
BLAST of mRNA_L-elsbetiae_contig90.18011.1 vs. uniprot
Match: A0A6H5KV99_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV99_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 8.400e-37
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
Query:   14 QWDRFQIVLSKPSGSQKLGMVLKHAQVFGDERLKRGAYLAGLAEGPSLAQDLGLSPKDRLICVEGLDVKTLPFDRI 89
            QWDRF++VLSKPSGSQKLGMVLKHAQV G+ERLKRGAYLAGLAEGPSLAQDLGLSPKDRLI VEGLDVKTLPFDRI
Sbjct:   23 QWDRFEVVLSKPSGSQKLGMVLKHAQVCGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRI 98          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig90.18011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYS2_ECTSI8.340e-16360.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FYS1_ECTSI8.140e-4191.76PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KV99_9PHAE8.400e-3793.42PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1039..1059
NoneNo IPR availableGENE3D2.30.42.10coord: 2..114
e-value: 1.7E-9
score: 39.5
IPR001478PDZ domainPROSITEPS50106PDZcoord: 19..108
score: 11.38
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 15..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig90contigL-elsbetiae_contig90:9002..18677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig90.18011.1mRNA_L-elsbetiae_contig90.18011.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig90 9002..18677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig90.18011.1 ID=prot_L-elsbetiae_contig90.18011.1|Name=mRNA_L-elsbetiae_contig90.18011.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1089bp
MQAGGQQQQQQQQQWDRFQIVLSKPSGSQKLGMVLKHAQVFGDERLKRGA
YLAGLAEGPSLAQDLGLSPKDRLICVEGLDVKTLPFDRIVGLIRNATFPL
TLVWSRQRKAGAAVSAKLPGTVVRQQPDSSPRPAPAPAAAAAATSSPKSM
SANGSCSKSTAGAGAGAGADSTEEWARVASRGRAASRSAREEEGRRDARV
SSESAAGDTEQQQQVRSSFQQQLRYTQEPERTNGGGNGGRLSSAAAGAVA
EVLAHQGKVPTSMSLAKTADIGGRQTPTSPGGQGPRVVMSFQQQQQFQMQ
QQQQQQQQADGQNGSNPNHSSPAAGASTRRRERDKGRREHRREPGGLGRG
AGVGIDSVAGSSSNSSNSSKRNSNSNVSQAAPAPSRGGRRGRGGGGGGRA
RGGGGGGGGGGGGGGGGGGGGGGGATAHPAAASAAAAAAAAAASRDAGRD
GVAAPEWLNPLMKAELSEFQGTRHARSRLKETVSREWAQQEYRAGIAMGQ
VDRSVTEVEFIRRRLEGGTLYALLAEESSNYLHVGPFTDADLELLGTSFA
KTQAFKELPPAASTGATGGAGDEASSATPRARAKTSKTGKAAAAAAVAAA
AAPGVTSWADRLRDFQIDVPASAAYDELASNPDSNPDARAQGRGGSVAEV
GAEQEQQGEQDQEVSSWDGVGVDATTVIHHRRQFDARCKAYEALSNASRT
DKTTGLLDRTHRLHQDHASIIVAKRGTLEGTLQNVRQQLHGREEQLRHVR
IEQRAVNPLDAALVAGLNESEAAIMTRVTEKRVQMAMIIEEANKVVQWEQ
TTELARREAMQHAADMHGHGGGYAVGAQHERNDLVQAMMSQKVDIMLLST
FCKLRGPWLAPPGNVREGRSLPSQESTEINPNSGTPPASDSDSGTARDAA
GDQASSRSSANGEGRAGRGSASGGGSSSSSSPTTAGSGSAGSVSGAAAAA
AAAEGPVELGKRQIQLRLLPPSEGGKNREKTGSPATATPAALASPQEAQH
SEEGGRRGDEASGEVTDAMEEVTSRLGDGGSSSLATGGKEAVMAQLAEAQ
EEAKAREVDEDAVGEDGPAPMDVSAPAVFSTGSGSESGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf