prot_L-elsbetiae_contig8929.17942.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8929.17942.1
Unique Nameprot_L-elsbetiae_contig8929.17942.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
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BLAST of mRNA_L-elsbetiae_contig8929.17942.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 6.920e-29
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = 0 
Query:   44 QAT-LYRAIAVLVAAGRRSPLTRPVVVLTDLRGAWKIIWLGGARLPSAVARRGEGRDAQ-ATAAGXXXXXXXXXMDVFVWRLSTADAASVVRSMLNEETVSWDGQVSWGPRRATAA 157
            QAT LYRAI  LVAA RRSPLTRPVVVLTDL+ +WK++WLGGAR  S +A  GE   A+ A             +D+FVWR+S  DA SVVRSML+EE V WDGQVSW PR+  AA
Sbjct:  334 QATGLYRAIGALVAANRRSPLTRPVVVLTDLQASWKLLWLGGAR--SDLAPAGEAAAAETAFHHAAATTVDGDEVDIFVWRMSPRDAISVVRSMLDEEAVGWDGQVSWAPRQGDAA 447
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8929.17942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE6.920e-2960.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8929contigL-elsbetiae_contig8929:4294..5824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8929.17942.1mRNA_L-elsbetiae_contig8929.17942.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8929 674..8128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8929.17942.1 ID=prot_L-elsbetiae_contig8929.17942.1|Name=mRNA_L-elsbetiae_contig8929.17942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MWRGRRLHSRGISGGGGGVGGVGGGVPLSSPVAGGSGGGGAVGQATLYRA
IAVLVAAGRRSPLTRPVVVLTDLRGAWKIIWLGGARLPSAVARRGEGRDA
QATAAGGQEQEQEEEMDVFVWRLSTADAASVVRSMLNEETVSWDGQVSWG
PRRATAAAAAGGGWLDLSGVFEPRTCLCLVFPPSPVASRQKRL*
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