mRNA_L-elsbetiae_contig8929.17942.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig8929.17942.1
Unique NamemRNA_L-elsbetiae_contig8929.17942.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig8929.17942.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.510e-29
Identity = 98/216 (45.37%), Postives = 122/216 (56.48%), Query Frame = 2
Query: 1880 EPPPSTTAGVACTRSATGEGQKKLLDVKTWVACKALLDSAGVGELRLVDSPVPRAELSFTVDDLRPFQWPAAGELGAEERAGAATARAGSVDSAAATPAVFSEPERAGLAAYLNAVLPPGGANAWVIPSAVGGGGGCDGDVGQGDGNNDDGADFLSTPLGG-----RRT---RPXXXXXXXXXXXXXXVVRGEAPAAAICLSEAVSCGAPSLGLRV 2503
            EP PST  GV C         ++L DV TW++C++LLDS GVG++RLV S VPRA+LS  VD L  FQWP           GAA AR+    +A A      + E+AGL AYLNAV+PPG AN WVIP     GG   G   +  G++++ +DFLS P  G     RR+   R                VRG  P+AAICLSEA+SCGAP+ GLRV
Sbjct:   85 EPSPSTATGV-CQPGGGVSDTRRLSDVTTWMSCRSLLDSMGVGDIRLVHSAVPRAKLSVIVDALHLFQWP-----------GAAAARS---LAAGARYRAAGDQEQAGLHAYLNAVIPPGDANEWVIPVV---GGQDPGAAAESGGHDNNSSDFLSVPCDGSWRRGRRSCQARDGRAAATEGGGGTQRAVRGGVPSAAICLSEAISCGAPASGLRV 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8929.17942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXW1_9PHAE2.510e-2945.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8929contigL-elsbetiae_contig8929:674..8128 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue1.8e-27
Seed eggNOG ortholog2880.D7FMP0
Hectar predicted targeting categoryother localisation
EggNOG OGs2AMK4@1,2RZCC@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size4268
Cds size582
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816968.9709172-UTR-L-elsbetiae_contig8929:673..27151622816968.9709172-UTR-L-elsbetiae_contig8929:673..2715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 674..2715 +
1691683949.4760654-UTR-L-elsbetiae_contig8929:673..27151691683949.4760654-UTR-L-elsbetiae_contig8929:673..2715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 674..2715 +
1622816968.988196-UTR-L-elsbetiae_contig8929:3794..42931622816968.988196-UTR-L-elsbetiae_contig8929:3794..4293Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 3795..4293 +
1691683949.4864273-UTR-L-elsbetiae_contig8929:3794..42931691683949.4864273-UTR-L-elsbetiae_contig8929:3794..4293Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 3795..4293 +
1622816969.025546-UTR-L-elsbetiae_contig8929:5824..62341622816969.025546-UTR-L-elsbetiae_contig8929:5824..6234Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 5825..6234 +
1691683949.514118-UTR-L-elsbetiae_contig8929:5824..62341691683949.514118-UTR-L-elsbetiae_contig8929:5824..6234Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 5825..6234 +
1622816969.0363367-UTR-L-elsbetiae_contig8929:6427..65401622816969.0363367-UTR-L-elsbetiae_contig8929:6427..6540Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 6428..6540 +
1691683949.522434-UTR-L-elsbetiae_contig8929:6427..65401691683949.522434-UTR-L-elsbetiae_contig8929:6427..6540Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 6428..6540 +
1622816969.0468879-UTR-L-elsbetiae_contig8929:7506..81281622816969.0468879-UTR-L-elsbetiae_contig8929:7506..8128Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 7507..8128 +
1691683949.5308068-UTR-L-elsbetiae_contig8929:7506..81281691683949.5308068-UTR-L-elsbetiae_contig8929:7506..8128Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig8929 7507..8128 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816969.000332-CDS-L-elsbetiae_contig8929:4293..45821622816969.000332-CDS-L-elsbetiae_contig8929:4293..4582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8929 4294..4582 +
1691683949.4948552-CDS-L-elsbetiae_contig8929:4293..45821691683949.4948552-CDS-L-elsbetiae_contig8929:4293..4582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8929 4294..4582 +
1622816969.011037-CDS-L-elsbetiae_contig8929:5531..58241622816969.011037-CDS-L-elsbetiae_contig8929:5531..5824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8929 5532..5824 +
1691683949.505881-CDS-L-elsbetiae_contig8929:5531..58241691683949.505881-CDS-L-elsbetiae_contig8929:5531..5824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig8929 5532..5824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8929.17942.1prot_L-elsbetiae_contig8929.17942.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig8929 4294..5824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig8929.17942.1

>prot_L-elsbetiae_contig8929.17942.1 ID=prot_L-elsbetiae_contig8929.17942.1|Name=mRNA_L-elsbetiae_contig8929.17942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MWRGRRLHSRGISGGGGGVGGVGGGVPLSSPVAGGSGGGGAVGQATLYRA
IAVLVAAGRRSPLTRPVVVLTDLRGAWKIIWLGGARLPSAVARRGEGRDA
QATAAGGQEQEQEEEMDVFVWRLSTADAASVVRSMLNEETVSWDGQVSWG
PRRATAAAAAGGGWLDLSGVFEPRTCLCLVFPPSPVASRQKRL*
back to top

mRNA from alignment at L-elsbetiae_contig8929:674..8128+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig8929.17942.1 ID=mRNA_L-elsbetiae_contig8929.17942.1|Name=mRNA_L-elsbetiae_contig8929.17942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7455bp|location=Sequence derived from alignment at L-elsbetiae_contig8929:674..8128+ (Laminarionema elsbetiae ELsaHSoW15)
GCGTAAGCTTGGGAAAAGGGGGGTCCGATTTTGTCTCAAAAACCACAGGG TCGACCCTTTTTTGTCAATTTCCCAAAAAAAAGTTCTCTTCTGGCATCTG TCGGCAGTCTTTCGCTTTGAGGAGTGGTATTTCATGCGACCTGTACATGA GGAACATCCACAAAGCAATCAAATTGCTCACGCTACGGGAATGGTCTAAA GACTTGCCGTGACATGGTGGGAACGTGCCACAACACTCGGTGGTTTTCGC CGGCCCCTAAAAAAAACAGAGAATCTACAATAAATGCAACACACATCCGA CGGACTAAAGGGGTACGCGGAGCAACACGCGCTGATGGAAGACACCCTGT AAGCCAACGCACCGAACTTCACAAGCATTGCTGCGAGCGTTCTATCTCGC AAACTTGGAACCTTTCCGCGTGCATGCGGCGCATCGCATCGGAGGGTCGC GTCATCGAAAGACAAACTCACTTACACAGTTGATGGACAGTTGAAGCTGT ACCCCGTCGTCCGTATATGCTTGCTCCACCTCTCTGCTTGTGTAGCCCCG CTCTCCACCCGGTGTTGTTAACACCGCGGCGAATGCGCTCGTCGGACAGC CAACATGCCGGCTCTGGGCTGCAAGAAATGCAAACAAGTGCAAAGATTAC GGGGCTCCGTGGATCGTATATTTTATGTGCAAAAAACAAACAAAAAAAAT CGGTCCAGAAATTATGAACACGACAGACGATGGGTGTATTGGTTAACTTG AGTTCGTACGCAGTTGTGGTAATCGGCTCTTCGTGGCCACTACAGATGCG TTGTAAGTACAGAGTCGGGATTGGCGTCGGATGTGGCTAAAGATTTGAAA TCTATGTAGGTATTGAGATTCGATGATTCGATTCTATGGTTATGACTGAA AGGAATGATTTATATGCTCAGTTTCGTCTGGAAAGACGGAGAATTAGACA CGTAATCAGTATTTTGTCTCCCCTTGCTCGGTTTTGTCGTACGCACCCAC GCGGCGCGTGCGTGCTTTGGGATTATCCTTCAATTGTTATCCTTCTCTGC TGTCAGAACCATATCCTTCTCATGCATGAACAGTGAACCCATGCTACCCT TCCCCCGCCAGTGTTTTCTTGCTCCTTCCTCCGCCTGGCGTTGGTGCTGT GTTTGTTACCTCTCTCGGTTGTCTCCATACTCTGCTTCAACTCGAATCTC GTACTGAGCCTGATCTCCGGCTGGAATCCCTTCGCCGTGTGAAACCCCGG GGTTGTTTCTTAACCGGCCCAGGATCTCAACTCGGAATATCGATAAACAC TCGTGTATCACGGCCATCTCTTGTCGGAGCATAACTCTACCGGCGTGACA ACCAGTTCCCTATTTTTCCTCCCCCTCAGAAGCCAACAGATCGTCAGGCG GTGCTCTTTGGATGTTGTTCCGATCAAAAAGGAGGGCCATTTAATTCGCC CGGCAATCAGTTTGAGGGCGCTGCACGCGGTCGGAGGAACATTTGGCCGA TATTTGGAGCCTTTTTTTTCCTTCTGGGATGAAGGGAAAAAAAGGTTGCG GCTTCGCTGCTCGGCGGCTCATTTTAATTATGTATGTGCGGGTGGTGTTG CTTCCAGACCAATAAAGGCGCAAATAACATTTCTTGTGTCTTTGCTCCGC CACCTCACCACCCATGAAGAGGTACACGCTAATAAAATAGGTGCTTACGC CCGACATTGTTTTGTTTGGGCGCCTCGAAGCGAAACCGTTTCCCCTCGAG CCACGATCACCAGGCCCTCTCTTCACATACACAACACCCTGGCATGATGG TAGTTACCACCCCCCCCCTGGTATCTACCGCCACCGTGCTTCTCCCCTGC TTGCTGTGCTGCTTGCACGAAAAGGAGTTGAGCCCCCACCGTCGACGACA GCAGGGGTGGCTTGCACGCGAAGCGCGACAGGGGAAGGGCAGAAGAAGCT CTTGGATGTCAAGACTTGGGTGGCTTGTAAGGCTCTGCTCGACAGCGCGG GCGTCGGCGAGCTTCGCTTGGTAGACTCCCCGGTCCCTAGAGGTGTGAGA CAGAACAGGGGGCCCCGTGGGAAGGCAGAACATGGGGGTGGGGTGGTGAT GGGGCACAAGGAGCGGGCAGTTACTTCTGATGAATTTTCCCTGCAGCCTT CAGATCATTGACCTGGCATTTGTTTTGTCTTTTAAGACAGAGCGCCACTG GTCGTGCCTGCAGAGGGGGATAGATAATCAATCGCCCACTCGTCTCCTTG TCGTGTACCAGTACATATTTAGTTTGCACATTACAATACGGAGTAGTTTT TTTCGGTGTCGCCTTCTTCATGTTCCTTTCCGTGTTTTTCGGCCTCTTGT GGCCGCTGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGA GAGAGCATGCTCTGCTATGTTTGATATGATGTGCAACGCATCTAAAGCAC CCCTTTTCGCGTCCTGTTTTTCCGCGGCTCCATCCGGACACATCTTTCCT CACTGATGTTGTTCCTGTTCCCGGCGGCTTAACTACCATGCATACCTTCT TTTTCGACCCTTCTTTTATTTATTTTATCTTCCGAGTGGTATGTACGTAC CCTACCTTTGATTTTTGTCGGCGAGACGCAAGACCCCTTCGGGGTCCAGT TTAGTACCGCCGGGCGTGTACGTACCATATTTTTTGTTTTATTTTTCTTC CGCGGCGTCGAGTGTGCCGCCTTGTTTTGTGACCACGGCCCCCCAAGGAT GTTTTGGACCAAGGGAGCTAATGTGAGAAACAACCAACATCAACCTCCGA CCTTCCCTTTGTCGAGAATCCTCTGTCTGCATAGCTTGAGCACAACACTG ACACAGAGAGAGAAGGAGGGGGATACGCGTATGTATAAGTGTGTTACGGA AATGTTGGCAAATGTCCAGCACCCCAGCTCGCCCAGAAGGGCCGTCCTAA TAAAATGTACGTGCAGGAAAAAGACAGCGGCCAACCGGGCAACCCGCCGA TAGCGTGCACCTTTCCATGTGCTGACCCCCCACCTCTCCGGACTCTCCCC TGCTCCCTCGCCCGTGGCCTTTACGTGCATGCCCCGCCTAAAAACAAACT ATTGATTGCCGTCACAAACAGCGGAGCTAAGCTTCACCGTCGACGACTTG CGCCCGTTTCAGTGGCCGGCGGCCGGAGAGCTGGGGGCAGAGGAGCGGGC CGGCGCCGCCACCGCCCGCGCCGGCAGCGTTGATTCCGCCGCAGCAACAC CGGCGGTGTTCAGCGAGCCCGAACGAGCGGGCCTCGCAGCCTACCTGAAC GCGGTGCTCCCCCCCGGTGGCGCGAACGCGTGGGTCATCCCCTCCGCGGT GGGAGGAGGCGGCGGCTGCGACGGCGACGTCGGTCAAGGCGACGGCAACA ACGACGACGGCGCCGACTTTTTGTCCACGCCGCTCGGTGGGAGGAGAACT CGGCCGCCGGTGGGCGGGGCGGCGGCAGCGGCAGCGGCGGCGGGAGGCGT CGTTCGCGGGGAAGCGCCCGCCGCGGCCATCTGCCTCTCCGAAGCCGTCA GTTGCGGGGCCCCTTCGCTGGGCCTGAGAGTGGCTCCTGGAGATTGTCCG TCCGGCTTCAGCCCCGGCCGATGTGGCGGGGCCGTCGTCTACATAGCCGC GGTATTTCCGGCGGCGGCGGTGGTGTCGGCGGTGTCGGCGGCGGGGTGCC CTTGTCCTCTCCGGTCGCCGGAGGAAGTGGAGGAGGGGGAGCGGTCGGCC AGGCGACGCTATACCGCGCGATCGCTGTGCTCGTGGCGGCGGGCCGCAGG AGCCCGCTGACCCGGCCCGTGGTGGTGCTGACCGACCTTCGCGGTGCCTG GAAGATCATCTGGCTCGGAGGGGCGCGGCTACCAAGCGCCGTCGCACGGC GAGGAGAAGGTGGGCGGGCGGTCCGGGGCCGGGGGGGGGGGGGGGGGGGG GGGGGGGGGCGGCCCGGGCAGGCGGGGTTGGTGTTTACGGACTTGGGTGT NNNNNNNNNGGGGTTGGGGCGGGGGGGGGGCGGGGGCCCGGGCGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGCGCGCGCGCGCACGGCATGCAGGGTTGGTGTTTACCGA CTTGTGTATTTGTGCCGCGTTGCTCATACTTCGCGAATGTAGGTATATGT GATGTGCCACTTTTTCAGTTTTGTGCTGGTCATCGCTCACTCCACGCCAG GACCTTGTTCTCGGCGCATTTTTTTTTGTCTGCGTCGTTTTTTTTTTCTT CTTTTTCTTACGGATACATACATACCCACACACCTTTACCAGCGCTCGGA CGAGGGTCCGAGCAAATTGAGAAGCAGCGCACCATTCCGGTCGCCACGTG GTAACCGCGTGGTACTGCTGTTTATCTTTTTTCTTTTTGGCGATTTTGCT TTTACCTTGTGGATGAAGGAGCGCGAGAAGATAGACCAGTCACAGATGGG ACGACGTTTTTTGTTTTGAGGCCCTTTGTTTCGTACATGCATATGTACCA CGTCTTGGGTTATCCCGTCTGCGCTCTGAACACCTCTGGACAACTTGTGT TGGATCGCTGTTTTTTTTTTGCTGAGGCTCGCTTTTCCCAACAGCAGTGT CACCGTCGTTGTCCGGCCGGTTTGCTCCAAGCGGCCTCCGTGCTGGCTTA CCTCAAATCGAGCGGTCAAGGCAAGGCGAACAACCCCCGAACACGACGGA GACTCGTGTATCTGACCGTGAGGTGAACCCCGGACACCACACAGAGACTC GTGTAGCTGACCGCTTCCTTCCCTCCTGCTTCATTGGATGTCCTCGCGCG CCCTGCAGGGAGAGATGCGCAGGCGACAGCAGCGGGGGGGCAGGAGCAGG AGCAGGAGGAGGAGATGGATGTGTTTGTCTGGAGGCTGAGCACGGCCGAC GCGGCATCGGTTGTCCGATCGATGCTCAACGAGGAGACCGTCTCGTGGGA CGGGCAGGTCTCCTGGGGCCCCCGTCGAGCCACCGCCGCCGCCGCCGCCG GGGGGGGGTGGCTCGACTTGTCCGGCGTCTTCGAACCCAGAACTTGCCTG TGTCTTGTGTTCCCGCCGTCGCCAGTCGCCAGCAGACAAAAACGCCTCTA GTCCCTCCCCCGCAACAGCGACCTTGAGATCCTATGAATGAGCTTCATGT TGCCGCGCGTGCCGCTCGATCGTGCCGTAGCCGCCGTGCTCTCCACGCCA GGAAGGGAGTGGTTGGAGTCGATGAAATTGGCCGATGAGGCTTCACCCCT GTCATGCTCGCCGCTGGTTGCAGTCACTCGCGAGTTCTCAAGATTCTTCT GAACAGGGGAGCCAACGTGGCAATACATAATGATAACGGTGGACTGCACA TCTGTCGGTTCAAGAAGGACACCACCTTTAGTCGTGACGTAGCTGCTGGT GAAGGTCGGCGCAGATCGGAAGCAAAGGTCTCTACATACTACAGGCGGCT CACATCGCTTCACCTGGCTGCGGATAAAGTGTACTCCGAGGCGGTGAGAG TGCTGATCAAGGTAGGCGAATCCCAACAGCCGTAGATTGGACGGTTCGAC AAGAGAATCGGAAGAAAATATCAAGATTGTACAGAGAGCCAGCTCCGTAA CCTGAAGGCTATATGTGGCATTTGCTGATGAAGGTGGAGGCCGTTCATGC GGTCTCTCAGCTGTGGGCAAACGGCACCCCCCTTTTTCACCCACGCTGCT GCAGAGGTTATGGGCAGAGCTACCAAAGGGCAACTTCGATCCCGCTGATC TTGATGTTGCCGATGCTGAGGCAAAGGGGGCTGGAAGGTCCAGCCTGCTC TTGGCTGCCCTGCTCAGGTGGGAGGTGTGCAATATTGGTTTTCTTAGAAT GTTGAGACGGCTGCTGCGATTGTTTTGAGGGCAGAATTGTATCCTGATGC TTTTGTTCTGCTCCTCTTCCGGCACTGCGCCTGCTGCCGTACCTCGTACC CCCGTCCTTTTTTTTTTGCGGCTAATAGATAAACAAGGGCTAAAAAAAAA GTTGTCCCTCGTCACACCTACCTTCCCCCCCCCCCCCCCCCCCCCCCAGC GCCAAATAACGGCCTTCTGTTTGGCGTGTGCTTAGGTGAGAGCCAAATGA AGCAAGCCGCGTAGAGGGGACATGTCATACGACGAAATCATGAAATGGCG GCGAGGGGGTCCGCAAGGGGGATCGCGGACGTAGCGTGCATGTTCTCCTC CGTGTGCCCCCTCTTCCATACAGGTTTTAGTGTAGCGTCCCCCCCCCCCC CCCCCCCCCCCCCCGCCCACACCAACACCATTCATGCAGGGGGGGCAGGG TGAGATGTATTGGTTTCTGCTGCGTGGGTTCGTNNNNNNNNNNGGGGTTT TCCTCCCTGGGCCCCCACTTCCCACTAGTTTTTTGGATGAGGGCCCCCCC CCCCCCCCCCCCGTGAGAGATCCAAAATAAAGTTTTAGTACGTAGGTGTC GGGAATATTGTTTTTGTGCGCCCTTGGGCTGAAATCTATCGTGTCTCCAT TCAACGTTTGTGTTCGAGGGCTAAACGCCACTGCACTCCGCCGTACGCCG TACCCACCGCCTCGAAACGATGCGACATGAAATGAGGACATGTTTAGATA TATCTGTGTGTCAGTCGCTTAATTGCCACGTTGTTTACTTGCTGAAGGAA GAAACATTCAACATCCCTTCAACAGCCCGCGGTCGAAGCTCGCGCCTAAT CATCGCGACCAACCAGGGACCAACCTATCGTTCTTGCATGGTATATTTCG CTCCCCGTCTCGTTTCACCCGCATGTTCGACAGGCATTTGGGGAAGCCTT ATCGACCGGGACCGCGTGTCGAGTGTAGTGTTTCGTCGCTGTTCTTGCGT TGTGATAGCCTTAGGCGGGGGGTTGACTGGGAACTACCACACACAGGAGT ATAAGTAGATGCAGCGACGTCGCTCAGCTTGCAGTTGAAGGAGGTGACGC CGTCGATGTGTCTATTTGTGGTCTAATCAAGATGCAGATCATATTCTGTG CTTGCATCACGGTATCACGTGGGTTTGGATCGTGTGGGCCCAGGATGCTT ATATGTGGGCTCGCGACACAAACAAAAACGTTTGGGGAAAAGGTGAAAAT GAAATGTCGACTGTGGGATTCGAACCCACGAGTACGAATACATGACGACC TGAACGCCACCCGATAGACCGCTCCGGCAAATCGACGATTTGATGATTAT GTGAGATTGTTTTCTATTATATACCCAAATATCTTCTACAGCAAGCAGGT CATGCGTTCGAGCCCATGGCGTTGGCGAATTTTTCTAACAAAAGTTAGTT CTTGTCGATGGATACCGCTACATAGTTCGTGTGTGTGTGCACTTGAGGGA AGAGACGGGTTCTGAGACCCTTATCGTGTTGAAAATCGAAGGCAAGCACC GCGGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig8929:674..8128+

>mRNA_L-elsbetiae_contig8929.17942.1 ID=mRNA_L-elsbetiae_contig8929.17942.1|Name=mRNA_L-elsbetiae_contig8929.17942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig8929:674..8128+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGCGGGGCCGTCGTCTACATAGCCGCGGTATTTCCGGCGGCGGCGG
TGGTGTCGGCGGTGTCGGCGGCGGGGTGCCCTTGTCCTCTCCGGTCGCCG
GAGGAAGTGGAGGAGGGGGAGCGGTCGGCCAGGCGACGCTATACCGCGCG
ATCGCTGTGCTCGTGGCGGCGGGCCGCAGGAGCCCGCTGACCCGGCCCGT
GGTGGTGCTGACCGACCTTCGCGGTGCCTGGAAGATCATCTGGCTCGGAG
GGGCGCGGCTACCAAGCGCCGTCGCACGGCGAGGAGAAGATGTGGCGGGG
CCGTCGTCTACATAGCCGCGGTATTTCCGGCGGCGGCGGTGGTGTCGGCG
GTGTCGGCGGCGGGGTGCCCTTGTCCTCTCCGGTCGCCGGAGGAAGTGGA
GGAGGGGGAGCGGTCGGCCAGGCGACGCTATACCGCGCGATCGCTGTGCT
CGTGGCGGCGGGCCGCAGGAGCCCGCTGACCCGGCCCGTGGTGGTGCTGA
CCGACCTTCGCGGTGCCTGGAAGATCATCTGGCTCGGAGGGGCGCGGCTA
CCAAGCGCCGTCGCACGGCGAGGAGAAGGGAGAGATGCGCAGGCGACAGC
AGCGGGGGGGCAGGAGCAGGAGCAGGAGGAGGAGATGGATGTGTTTGTCT
GGAGGCTGAGCACGGCCGACGCGGCATCGGTTGTCCGATCGATGCTCAAC
GAGGAGACCGTCTCGTGGGACGGGCAGGTCTCCTGGGGCCCCCGTCGAGC
CACCGCCGCCGCCGCCGCCGGGGGGGGGTGGCTCGACTTGTCCGGCGTCT
TCGAACCCAGAACTTGCCTGTGTCTTGTGTTCCCGCCGTCGCCAGTCGCC
AGCAGACAAAAACGCCTCTAGGGAGAGATGCGCAGGCGACAGCAGCGGGG
GGGCAGGAGCAGGAGCAGGAGGAGGAGATGGATGTGTTTGTCTGGAGGCT
GAGCACGGCCGACGCGGCATCGGTTGTCCGATCGATGCTCAACGAGGAGA
CCGTCTCGTGGGACGGGCAGGTCTCCTGGGGCCCCCGTCGAGCCACCGCC
GCCGCCGCCGCCGGGGGGGGGTGGCTCGACTTGTCCGGCGTCTTCGAACC
CAGAACTTGCCTGTGTCTTGTGTTCCCGCCGTCGCCAGTCGCCAGCAGAC
AAAAACGCCTCTAG
back to top