mRNA_L-elsbetiae_contig8858.17876.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D7G7Q5_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q5_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 5.030e-167 Identity = 236/282 (83.69%), Postives = 261/282 (92.55%), Query Frame = 1
Query: 1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
+SGSHV LG+CELSVDTM+S+AG G N+S+GTG +V+ SCKLVPQPSFFDFLAGGLEMQFTV IDYTASNGDPNVADSLHYHD +GR NQYAQSISSVGKILEHYD+DKRFPVLGFGGCP+PGAPA+HCFAVNGR+ D EVHG+ +ILDVY RESL+WVQLSGPTLFAP Q A+VAASER+LDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVG+ADFSLMEQLDGDD+RIAN+QG+KASRDIVQFVPMR+F+N GFHALA+EV
Sbjct: 261 KSGSHVSLGSCELSVDTMVSRAGEPGGVLNISSGTGQLVIESCKLVPQPSFFDFLAGGLEMQFTVGIDYTASNGDPNVADSLHYHDSTGRTLNQYAQSISSVGKILEHYDSDKRFPVLGFGGCPIPGAPAIHCFAVNGREDDPEVHGVESILDVY-RESLKWVQLSGPTLFAPLINQVASVAASERTLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGRADFSLMEQLDGDDIRIANAQGRKASRDIVQFVPMREFSNLGFHALAREV 541
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE) HSP 1 Score: 359 bits (921), Expect = 5.550e-117 Identity = 176/281 (62.63%), Postives = 218/281 (77.58%), Query Frame = 1
Query: 4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
SG+HV LG+C+ SV+ + SKA S + L G G++ V SC L PQPSFFD++AGG+++ FTVAIDYTASNGDP+ SLHYHDP+G N+Y Q+I SVG +LE++D D+RFPV GFGGCPV APA HCFAVNG ++D EV GI +LD+Y R+SL VQLSGPTLFAP Q A++AAS S DP Q Y +L+++TDGVI DM NT++A+VAAAD PFS++IVGVG AD++ MEQLDGDDVR+ N G++A RDIVQFVPMRDFA K HALAKEV
Sbjct: 263 SGNHVLLGSCKASVNDIKSKADSGSQNLMLDKGQGSITVSSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGSLHYHDPTGHTNNEYGQAIQSVGGVLEYFDDDRRFPVFGFGGCPVYRAPASHCFAVNGNENDPEVEGIAGVLDLY-RQSLTRVQLSGPTLFAPVISQAASLAASTMSKDPSQQYYTILLLITDGVICDMENTVEAIVAAADYPFSMVIVGVGDADYTSMEQLDGDDVRLVNRAGQRAGRDIVQFVPMRDFAGKSSHALAKEV 542
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE) HSP 1 Score: 318 bits (815), Expect = 4.990e-101 Identity = 160/283 (56.54%), Postives = 210/283 (74.20%), Query Frame = 1
Query: 4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAP--AVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
SG+HV LG+C+ SV+ + S A + L G A+ V SC + PQP+FF ++AGG+++ FTVAIDYT SNG P+ DSLHYHDP+GR N+YAQ+I SVG +LE++D D+RFPV GFGG P AP HCFAVN + DAEV GI +L+ Y R+SL+ V+LS PTLFAP + A++AAS + DP Q Y +L+++TDG I D+ NT++A+VA++D PFSV+IVGVG+AD++ M++LDGDDVR+ N GK+A RDIVQFVPMRDFA K HALAKEV
Sbjct: 267 SGNHVLLGSCKASVNDIKSMAETGLQNLMLDKGRRAITVRSCTITPQPTFFGYIAGGMQIGFTVAIDYTLSNGRPSQPDSLHYHDPTGRTDNEYAQAIQSVGGVLEYFDDDRRFPVYGFGGRPKK-APRQTSHCFAVNDNEKDAEVEGISGVLETY-RQSLKRVELSLPTLFAPVISKVASLAASTMTKDPSRQYYTILLLITDGAIMDVENTVEAIVASSDYPFSVVIVGVGEADYTSMKRLDGDDVRLVNKAGKRAGRDIVQFVPMRDFAGKSSHALAKEV 547
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA) HSP 1 Score: 295 bits (756), Expect = 3.650e-93 Identity = 154/285 (54.04%), Postives = 198/285 (69.47%), Query Frame = 1
Query: 1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGT--GAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEVS 840
+ G+H +GAC S++ L G ++ + SAG G + V C+ QPSFFD+L GG+E+QF AIDYT+SNGDP SLHY DPSG++ N+YA++IS +G ++E YDADK FPV+GFGG P P HCFAVNG + E G+ IL +Y +SLR V+L GPTLFAP Q A VA+S ++ DP + KY VL+I+TDG I DM NT+DA+V A+ LP S+IIVGVG ADF ME LDGDD + +S G +A RDIVQFVPMR A++G HA+AKEVS
Sbjct: 215 QEGAHTLVGACSASIND-LQGLGSKTLALKSSAGEACGELAVLECRTFTQPSFFDYLGGGMELQFQCAIDYTSSNGDPATPGSLHYRDPSGKL-NEYARAISDIGSVIEFYDADKAFPVMGFGGKPHHSQPVQHCFAVNGNEAQPEAMGVQGILQMYY-DSLRTVELFGPTLFAPIIGQAAGVASSLQTDDPSHHKYSVLLILTDGQICDMQNTVDAIVGASHLPLSIIIVGVGNADFKSMEVLDGDDAALVSSSGVRAQRDIVQFVPMRQVASRGEHAIAKEVS 496
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI) HSP 1 Score: 287 bits (734), Expect = 9.570e-90 Identity = 149/283 (52.65%), Postives = 194/283 (68.55%), Query Frame = 1
Query: 1 RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGA-PAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
+SG+H LG+C+ SV+ + S A + L G A+ V SC + PQP+FF ++AGG+++ FTVAIDYTASNGDP+ SLHYHDP+GR N+YAQ+I SVG +LE++D D+RFPV GFGG P + A HCFAVN + DAEV GI +L+ Y R+SL+ VQLS PTLFAP + A++AAS + DP Q Y +L+++TDG I D+ N VGVG+A+++ M+ LDGDDVR+ N GK+A RDIVQFVPMRDFA K HALAKEV
Sbjct: 229 KSGNHALLGSCKASVNDLKSMAETGLQNLMLDKGRRAITVRSCTVTPQPNFFGYIAGGMQIGFTVAIDYTASNGDPSRRGSLHYHDPTGRTNNEYAQAIQSVGGVLEYFDDDRRFPVYGFGGRPKKTSRQASHCFAVNDNEKDAEVEGIAGVLETY-RQSLKRVQLSAPTLFAPVISKVASLAASTMTKDPSQQYYTILLLITDGAIMDVEN-----------------VGVGKANYASMKLLDGDDVRLVNKAGKRAGRDIVQFVPMRDFAGKSSHALAKEV 493
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A835ZFM3_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM3_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.010e-88 Identity = 149/289 (51.56%), Postives = 202/289 (69.90%), Query Frame = 1
Query: 1 RSGSHVPLGACELSVDTMLSKAGGQSGSF------NLSAGTGAVVVH-SCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKGFHALAKEV 837
+SG H+ +G CELSV+ ++S+A Q ++ AG+ ++++ +C LVPQPSFFD++AGG + F VAIDYTASNG N SLHY PSG++ +YAQ+I VG++L +YD+D+ +PV GFGGCP A A HCFAV G + D V GI +L+ Y SL+ ++L GPTLFAP Q A+AAS +LDPE Q Y VL+++TDG+I DM N +D+LVAAA+ P SVIIVGVG+ +F+ M LDGDD R+ +S+G+ A RDIVQFV M DF +G+ LA+EV
Sbjct: 256 KSGRHILIGMCELSVNDIISRATSQEPAYLSRSQNGRGAGSDSMLIFDACTLVPQPSFFDYIAGGCSLNFVVAIDYTASNGPVNDPTSLHYQHPSGQLT-EYAQAIQGVGQVLAYYDSDQLYPVYGFGGCPPGEAVANHCFAVTGNEADPCVQGIAGVLEAYYA-SLQRIKLHGPTLFAPVIAQATALAAS--TLDPERQNYWVLLLLTDGLIYDMDNCIDSLVAAAEYPISVIIVGVGRENFAPMRTLDGDDQRLRSSRGQYAVRDIVQFVAMSDFVGRGYEELAREV 540
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.270e-78 Identity = 147/303 (48.51%), Postives = 187/303 (61.72%), Query Frame = 1
Query: 1 RSGSHVPLGACELSVDTMLS-----------------KAGGQSGSFNLSAGTGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP---QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANS-QGKKASRDIVQFVPMRDFANKGF---HALAKEV 837
R+G H +G C S+ M K +S S+ S G +VV C + +PSF D++AGG E+ FT+AIDYTASNG P SLHY DP+G V N YA+++S +G++LE YD DK+FPV+GFGG P PA H FAVN ++ EV G+ +L Y +SLR VQLSGPTLF Q A +A S + + QKYHVL I+TDG+INDM T+ A+V AAD P S++IVGVGQ DF+ M+ LDGD R+ + GK ASRD+VQFVP RDF G HALAK V
Sbjct: 264 RAGGHDFIGGCSASIADMQRWSTASDDASRGPALVNPKKEAKSASYKDS---GRLVVDLCTITERPSFLDYIAGGTEISFTMAIDYTASNGTPADPRSLHYVDPAGTVLNDYARAMSGIGRVLEFYDTDKKFPVIGFGGKLGPDLPANHAFAVNFQEDAPEVEGMAGVLQAYY-QSLRRVQLSGPTLFQAIINQAAQIANSTKHRNSVGQKYHVLCIMTDGIINDMDATVSAIVDAADAPLSIVIVGVGQGDFTAMDHLDGDRQRLTSPFTGKVASRDMVQFVPFRDFNGFGSAAQHALAKHV 562
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A176W2E8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W2E8_MARPO) HSP 1 Score: 252 bits (643), Expect = 2.920e-76 Identity = 132/238 (55.46%), Postives = 167/238 (70.17%), Query Frame = 1
Query: 103 TGAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAPQ-TAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANKG 813
TG + + SC + P SF D++ GG E+ F VA+D+TASNG P DSLHY DPSGR PN+Y QSI +VG++L+HYD+D+RFP GFGG P+ G P HCFA+NG AEV G+ IL YS ++LR V L+GPTLFAP A + + + + ENQKY VL+I+TDGVI D T++ALV A++LP SV+I+GVG ADFS ME LD D R+ S G+ A RDIVQFVPM D KG
Sbjct: 317 TGMLRIKSCTISPYHSFLDYIVGGCEINFMVAVDFTASNGSPFQPDSLHYADPSGR-PNKYQQSILAVGEVLQHYDSDQRFPAWGFGGRPIDG-PVSHCFALNGNQQAAEVDGVSGILYAYS-QALRHVALAGPTLFAPVINMAASIASQFVSQENQKYFVLLIITDGVITDPQQTINALVHASNLPLSVLIIGVGGADFSEMETLDADKKRLQTSDGRAAHRDIVQFVPM-DKMEKG 550
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: D8T435_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T435_SELML) HSP 1 Score: 240 bits (613), Expect = 5.920e-72 Identity = 135/276 (48.91%), Postives = 183/276 (66.30%), Query Frame = 1
Query: 4 SGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGT-----GAVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAP--QTAAVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDDVRIANSQGKKASRDIVQFVPMRDFANK 810
+G H +G+ ++S++ + + AGG SF L + G + V C++ SF D+L GG ++ F VA+D+TASNG+P+ DSLHY DPSG+ PN Y +I SVG++L HYD DK F GFGG P+ +P HCF +NG H AEV G+ IL YS ++L+ V L+GPTLFAP A+ ASE + E QKY VL+I+TDGVI D+ T++A+V AA LP S++IVGVG ADF+ ME LD D ++ +S G+ A RDIVQFVP+RD NK
Sbjct: 274 NGRHDLIGSTQVSLNELQASAGGTV-SFELKRPSDNQAGGKLHVEGCRISSGHSFLDYLRGGCQLSFMVAVDFTASNGNPHQQDSLHYLDPSGK-PNSYEIAIESVGEVLYHYDYDKLFAAWGFGGKPM-NSPVSHCFNLNG--HSAEVDGVDGILRAYS-QALKSVALAGPTLFAPVVNMASSIASEY-ISQEKQKYFVLLIITDGVITDLHQTINAIVNAASLPLSILIVGVGGADFTEMEVLDADKRKLQSSDGRLAERDIVQFVPLRDMGNK 542
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Match: A0A0L9TIR3_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TIR3_PHAAN) HSP 1 Score: 241 bits (616), Expect = 6.770e-71 Identity = 138/299 (46.15%), Postives = 183/299 (61.20%), Query Frame = 1
Query: 4 SGSHVPLGACELSVDTMLSK-AGGQSGSFNLSAGTG----------AVVVHSCKLVPQPSFFDFLAGGLEMQFTVAIDYTASNGDPNVADSLHYHDPSGRVPNQYAQSISSVGKILEHYDADKRFPVLGFGGCPVPGAPAVHCFAVNGRDHDAEVHGIGAILDVYSRESLRWVQLSGPTLFAPQTA-AVAASERSLDPENQKYHVLMIVTDGVINDMGNTMDALVAAADLPFSVIIVGVGQADFSLMEQLDGDD-VRIANSQGKKASRDIVQFVPMRDF---ANKGFHALAKEVSGRWT 852
+G H +G ++S+ + + GQ G+ LSA G + V Q SF D+LAGG E+ F VA+D+TASNG+P + DSLHY DPSGR PN Y ++IS VG++L++YD+DKRFP GFG P+ G P HCF +NG H EV GI I+ Y+ L V L+GPTLF P + A + +S+ +KY VL+I+TDGV+ D+ T DALV A+DLP S++IVGVG ADF ME LD D R+ NS G+ ASRDIVQFVP RD A K + + + G+W
Sbjct: 335 NGKHDLMGKVQMSLMELEKLYSSGQGGNLYLSAAAGHNSHNKMLKGRLYVDKYAESVQYSFLDYLAGGFELNFMVAVDFTASNGNPRLPDSLHYIDPSGR-PNAYQRAISEVGEVLQYYDSDKRFPTWGFGARPIDG-PVSHCFNLNGSSHYCEVEGIQGIMKAYTSALLN-VSLAGPTLFGPVISNAARIASQSVANGGRKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIVGVGGADFKEMEILDADKGERLENSSGRLASRDIVQFVPFRDVQRSARKQYRGVRQRPWGKWA 630 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8858.17876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8858.17876.1 >prot_L-elsbetiae_contig8858.17876.1 ID=prot_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp RSGSHVPLGACELSVDTMLSKAGGQSGSFNLSAGTGAVVVHSCKLVPQPSback to top mRNA from alignment at L-elsbetiae_contig8858:3048..7795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8858.17876.1 ID=mRNA_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4748bp|location=Sequence derived from alignment at L-elsbetiae_contig8858:3048..7795- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8858:3048..7795- >mRNA_L-elsbetiae_contig8858.17876.1 ID=mRNA_L-elsbetiae_contig8858.17876.1|Name=mRNA_L-elsbetiae_contig8858.17876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig8858:3048..7795- (Laminarionema elsbetiae ELsaHSoW15)back to top |