mRNA_L-elsbetiae_contig885.17873.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: D7G3J4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J4_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.200e-83 Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIV+ELTGRINKCGVISPRFDMPL DVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY
Sbjct: 58 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVVELTGRINKCGVISPRFDMPLQDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 187
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A836CHB7_9STRA (Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB7_9STRA) HSP 1 Score: 241 bits (616), Expect = 6.700e-76 Identity = 116/130 (89.23%), Postives = 125/130 (96.15%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLADTLKT+SNAEKRGKRQVLIRP SKVVVKFLQ MQK+GYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFD+PL D+EKW+ NLLPARGFGHIVL+TT+GIMDHEEARRKHTGGK+LGFFY
Sbjct: 1 MVRMSVLADTLKTLSNAEKRGKRQVLIRPSSKVVVKFLQCMQKHGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDVPLADIEKWMVNLLPARGFGHIVLSTTYGIMDHEEARRKHTGGKVLGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: F0Y589_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y589_AURAN) HSP 1 Score: 233 bits (593), Expect = 1.930e-72 Identity = 110/130 (84.62%), Postives = 122/130 (93.85%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LK+ISNAEKRGKRQVLIRPCSKV+VKFLQ MQK+GYIGEFEIVDDHR+GKIVIELTGRINKCGVISPRFD+ + D+E W+NNLLP+R FGH+VL+TTFGIMDHEEARRK TGGKILGFFY
Sbjct: 1 MVRMSVLADCLKSISNAEKRGKRQVLIRPCSKVIVKFLQTMQKHGYIGEFEIVDDHRSGKIVIELTGRINKCGVISPRFDVEIKDMESWINNLLPSRQFGHLVLSTTFGIMDHEEARRKRTGGKILGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A2D4CDH8_PYTIN (40S ribosomal protein S15a n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDH8_PYTIN) HSP 1 Score: 230 bits (586), Expect = 2.170e-71 Identity = 108/130 (83.08%), Postives = 121/130 (93.08%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKT+ NAEKRGKRQV+IRP SKV+VKFLQVMQKNGYIGEFEI+DDHR+GKIV+EL GRINKCGVISPRFD+ L D+EKWVNNLLP+R FGHIVL+TTFGIMDH EARRKHTGGK++GFFY
Sbjct: 1 MVRMSVLADCLKTMYNAEKRGKRQVMIRPSSKVIVKFLQVMQKNGYIGEFEIIDDHRSGKIVVELKGRINKCGVISPRFDIKLQDMEKWVNNLLPSRLFGHIVLSTTFGIMDHHEARRKHTGGKVIGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A7S3PA85_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PA85_9STRA) HSP 1 Score: 227 bits (579), Expect = 2.440e-70 Identity = 106/130 (81.54%), Postives = 120/130 (92.31%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKT+SNAEKRGKRQVL+RP SKV+VKFLQ MQK+GYIGEFEIVDDHR+GKIV+EL GRINKCGV+SPRFD+ + D+EKWV NLLP+R FGHIVLTT +GIMDHEEARRKHTGGK+LGFFY
Sbjct: 1 MVRMSVLADALKTMSNAEKRGKRQVLLRPSSKVIVKFLQCMQKHGYIGEFEIVDDHRSGKIVVELNGRINKCGVVSPRFDVQVKDMEKWVGNLLPSRQFGHIVLTTAYGIMDHEEARRKHTGGKVLGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A485KLL4_9STRA (Aste57867_8878 protein n=32 Tax=Eukaryota TaxID=2759 RepID=A0A485KLL4_9STRA) HSP 1 Score: 227 bits (578), Expect = 3.450e-70 Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKTI NAEKRGKRQVL+RP SKV+VKFLQ MQKNGYIGEFEIVDDHR GKIV+EL GRINKCGVISPRFD+ D+EKW+NNLLP+R FGHIVL+TT+GIMDH EARRKHTGGK++GFFY
Sbjct: 1 MVRMSVLADCLKTIYNAEKRGKRQVLVRPSSKVIVKFLQTMQKNGYIGEFEIVDDHRGGKIVVELRGRINKCGVISPRFDIKQQDMEKWINNLLPSRQFGHIVLSTTYGIMDHNEARRKHTGGKVIGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A7S4SDW0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SDW0_9DINO) HSP 1 Score: 226 bits (576), Expect = 6.890e-70 Identity = 106/130 (81.54%), Postives = 122/130 (93.85%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LK ISNAEKRGKRQVLIRPCSKV+VKFLQVMQK+GYIGEFEI+DDHRAGKIVIELTGR+NKCGVISPRFD+PL+ +E W ++LP+R FGH+VL+TTFGIMDHEEARRK+TGGKI+GFF+
Sbjct: 1 MVRMSVLADCLKNISNAEKRGKRQVLIRPCSKVIVKFLQVMQKHGYIGEFEIIDDHRAGKIVIELTGRLNKCGVISPRFDVPLNKLESWTVDILPSRQFGHLVLSTTFGIMDHEEARRKNTGGKIVGFFF 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A8E8PJK2_9STRA (Ribosomal protein S15A n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJK2_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.890e-70 Identity = 104/130 (80.00%), Postives = 121/130 (93.08%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKT+SNAEKRGKRQVL+RP SKV++KFLQVMQKNGY+GEFE+VDD RAGKIV+ LTGRINKCGVISPRFD+P+ D+EKWV NLLP+R FGH+VLTT+ GIMDHEEAR++HTGGK+LGFFY
Sbjct: 1 MVRMSVLADALKTLSNAEKRGKRQVLLRPSSKVIIKFLQVMQKNGYVGEFELVDDRRAGKIVVNLTGRINKCGVISPRFDVPVKDMEKWVANLLPSRQFGHVVLTTSQGIMDHEEARKRHTGGKVLGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A2R5GX50_9STRA (40S ribosomal protein S15a n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GX50_9STRA) HSP 1 Score: 226 bits (575), Expect = 9.740e-70 Identity = 104/130 (80.00%), Postives = 121/130 (93.08%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKT+SNAEKRGK+QVLIRPCSKV++KFL+VMQ +GYIGEFE+VDDHR+GKIV+ELTGR+NKCGVISPRFD+ + D+EKWV NLLP+R FGHI+LTT+ GIMDHEEARRK TGGKILGFFY
Sbjct: 1 MVRMNVLADALKTLSNAEKRGKKQVLIRPCSKVIIKFLKVMQAHGYIGEFEVVDDHRSGKIVVELTGRLNKCGVISPRFDVQVGDIEKWVGNLLPSRQFGHIILTTSAGIMDHEEARRKQTGGKILGFFY 130
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Match: A0A812JFE9_9DINO (RPS15A protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812JFE9_9DINO) HSP 1 Score: 224 bits (572), Expect = 2.750e-69 Identity = 105/130 (80.77%), Postives = 122/130 (93.85%), Query Frame = 3
Query: 3 MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDMPLHDVEKWVNNLLPARGFGHIVLTTTFGIMDHEEARRKHTGGKILGFFY 392
MV+M VLAD LKTI NAEKRGKRQVL+RP SKV+VKFLQVMQK+GYIG+FE+VDDHRAGKIV++LTGRINKCGVISPRFD+ + ++EKW+++LLP+R FGHIVLTT+ GIMDHEEARRKHTGGKILGFFY
Sbjct: 1 MVRMSVLADCLKTIYNAEKRGKRQVLVRPASKVIVKFLQVMQKHGYIGDFELVDDHRAGKIVVQLTGRINKCGVISPRFDVTVPEIEKWISSLLPSRQFGHIVLTTSAGIMDHEEARRKHTGGKILGFFY 130 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig885.17873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig885.17873.1 >prot_L-elsbetiae_contig885.17873.1 ID=prot_L-elsbetiae_contig885.17873.1|Name=mRNA_L-elsbetiae_contig885.17873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MVKMGVLADTLKTISNAEKRGKRQVLIRPCSKVVVKFLQVMQKNGYIGEFback to top mRNA from alignment at L-elsbetiae_contig885:12994..18891- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig885.17873.1 ID=mRNA_L-elsbetiae_contig885.17873.1|Name=mRNA_L-elsbetiae_contig885.17873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5898bp|location=Sequence derived from alignment at L-elsbetiae_contig885:12994..18891- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig885:12994..18891- >mRNA_L-elsbetiae_contig885.17873.1 ID=mRNA_L-elsbetiae_contig885.17873.1|Name=mRNA_L-elsbetiae_contig885.17873.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig885:12994..18891- (Laminarionema elsbetiae ELsaHSoW15)back to top |