mRNA_L-elsbetiae_contig864.17673.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig864.17673.1
Unique NamemRNA_L-elsbetiae_contig864.17673.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: D8LPR5_ECTSI (Pex2_Pex12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR5_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 6.760e-131
Identity = 236/395 (59.75%), Postives = 252/395 (63.80%), Query Frame = 1
Query:    1 MDMLVSSALEADSSLPSFFEMFMTQQVEQNLKPAARHAH----------------------SALAVRWPSLHRISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPP-PLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPV-----ATRSRPTS------DDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAAEVSDAKARTRMSTSPSGAAGTPSSGGAGGSVRLGDRVARYGRVLLVTAVVAFKIVEWWNRVEAQ 1083
            MDML SSALEADSSLPSFFEMFMTQQVEQ+LKPAARHAH                      SALA+RWPSLHR+SPWFDEAFL  SLLVEA+FLS HSSLL+ESFYGLRRCRYGPK GPPGPP P   S +A+ DAHV+FDLNGAGYG GQGLRARDRRKALL  A LPYLLAKLD GHER+  ARA GG P P  ++ EP      A+  R +S      DD V   + G                                         FQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEA                                    LGDRVARYGRVLL+TAVVAFKIVEWWNRVE+Q
Sbjct:    1 MDMLASSALEADSSLPSFFEMFMTQQVEQSLKPAARHAHRHQTSKHAPLCLCRYYVMLFAISALALRWPSLHRLSPWFDEAFLVLSLLVEAKFLSKHSSLLSESFYGLRRCRYGPKSGPPGPPTPQPASSDAEHDAHVAFDLNGAGYGQGQGLRARDRRKALLMTAALPYLLAKLDAGHERSLAARAYGGLPRPTPQDEEPAVDGAAASARRNSSVRGSNTDDGVHGGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGDRVARYGRVLLITAVVAFKIVEWWNRVESQ 395          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: UPI0006452102 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006452102)

HSP 1 Score: 94.0 bits (232), Expect = 1.180e-17
Identity = 96/366 (26.23%), Postives = 155/366 (42.35%), Query Frame = 1
Query:   34 DSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPP------GPPPLSVSPEAQEDAHVSFD-----------LNGAGYGP----GQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAAEVSDAKARTRMSTSPSGA-AGTPSSGGAGGSVRLGDRVARYGRVLLVTAVVAFKIVEWW 1065
            D + PSFFEMF   Q+  + KPA ++  + L+ R P L  I  + DE F +  LL+E  +L  + +  +E+FY L+R     K G P       P   ++S ++   A  S +           L+     P     + +  RD+R ++L    LPYL AKLD  ++R                E +P+ T                                  L N A +        +  LR LF +VYP++ A+YE S  +YQ LYL+  + F++P L    +V++R T +D +  A A +A      +   R++   +     TP        V++ D +  Y + +L  +V  FK +EWW
Sbjct:   13 DPNRPSFFEMFAQHQMMPSFKPALKYIFTVLSQRNPRLSVIVKYHDEFFYSLLLLLEYHYLKYYEASFSENFYNLKRSIKVSKTGDPLLLRLWDPSKAALSEQSTASAPRSNENTVKQLNKQSLLSIMSKAPKDKESKPITMRDKRMSILFLVFLPYLKAKLDELYKR----------------ESDPINTLGL-------------------------------LDNEASQHPF-----IKTLRKLFLKVYPVISATYEASFFIYQLLYLYEYTDFYTPFLHFQRIVLKRLTHQDIENHANAVSA------RRNERIAYVRNWPYVFTP-------VVKVLDSILDYSKFILPASVFLFKSLEWW 313          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A8K1FCI4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCI4_PYTOL)

HSP 1 Score: 91.3 bits (225), Expect = 1.050e-16
Identity = 93/344 (27.03%), Postives = 143/344 (41.57%), Query Frame = 1
Query:   46 PSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISP--WFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSL---FFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAAEVSDAKARTRMSTSPSGAAGTPSSGGAGGSVRLGDRVARYGRVLLVTAVVAFKIVEW 1062
            PS +E+ M +++   L+PA  +    L   +P L    P    +E +     L+E  FL+ + SL +E F+G++R  Y          PL  +   +  A  +  L               RR +L+ A L+PYL  K+D  H R  VA+A      P   E + +   S P                                 +  RA     ++LS L +L   F + YP +  +YE S  +YQWLYLF  + +FSP LR  G+++ R T  D     E+A A + S+ + +   S S SG       G     +R    V  +  VLLV  + A+K +EW
Sbjct:   23 PSLYELLMQERMAGGLRPAVDYLVQTLCDTYPQLSTAPPIQHLEETYALLKCLLERYFLARYDSLSSEKFFGMKRVMYHAA-------PLQDAASGEAPAATTAPLT-----------QHARRLSLMYAVLMPYLKGKVDHLH-RQLVAQAPSASTQPREDEEDRITEASSPV-------------------------------QAKLRAFLRRLKQLSLLMTLKKAFIKGYPFVHLAYEASFFLYQWLYLFGDTPYFSPFLRRMGVILVRVTAND-----ESAFAQKQSEHRDKLLSSLSGSGVLQRVQRG----LLRSAWAVYDHSHVLLVLGIAAYKFLEW 307          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A662X891_9STRA (Peroxin-12 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X891_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.710e-16
Identity = 87/280 (31.07%), Postives = 113/280 (40.36%), Query Frame = 1
Query:   46 PSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISPW--FDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGA-GYGPGQG-LRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRR-----LSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 858
            PS FE+ M +++    KPAA +   AL    P L    P   FDE +      VE  FLS +  L  E FYG++R                          V F   GA G  P    L  R R+ AL+ A L+PYL AKLD  H +  V +       P T      A+  R T++ S +  T                         +R RT  RR      L  L+  F   YP    +YEGS  VYQWLYLF  + +FSP LR    ++ R T +D
Sbjct:   25 PSLFELLMQERMASGFKPAAEYLVHALCESSPQLALALPVRRFDETYALLRYCVERYFLSRYDGLATEKFYGMKR--------------------------VGFQAAGADGAQPTTSPLTPRARKMALVFAVLVPYLKAKLDAYH-KTLVEQL------PRTATSSSTASSDRTTANASENQMT-------------------------QRMRTLLRRLRGFAYLRTLQKSFVATYPFAHLAYEGSFFVYQWLYLFGDTPYFSPFLRRMKTILVRVTPDD 246          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: K3WL72_GLOUD (Peroxin-12 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL72_GLOUD)

HSP 1 Score: 85.5 bits (210), Expect = 1.010e-14
Identity = 74/283 (26.15%), Postives = 120/283 (42.40%), Query Frame = 1
Query:   16 SSALEADSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISP--WFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 858
            ++ALE D+  PS FE+ M +++   +KPA  +    +   +P +    P  +F+E++      +E  FL+ + SL  E FYG++R  +              +    + A                L  R R+++L+ A L+PYL AKLD  H               + R            + + VDS  GG   +    T    F RR           +  + L  L+  F + YP    +YEG+  +YQWLYLF  + +FSP LR   +++ R T +D
Sbjct:   15 TAALEGDAQPPSLFELMMQERMAAGIKPALEYLVHTVTESYPQVSSALPVRYFEESYALLRFFMERYFLNRYDSLATEKFYGMKRVMF------------QAAEHTNQPAKTEL------------LSDRARKQSLIFAVLVPYLKAKLDNYHRSLKET---------LPRXXXXXXXXXXXXASEGVDSG-GGNAITTTVKTNLHVFLRR----------LKQLQLLYRLKKAFLKTYPFAHFAYEGAFFLYQWLYLFGDTPYFSPFLRRMKIILVRVTADD 253          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A5D6Y815_9STRA (Peroxin-12 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y815_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.820e-14
Identity = 85/283 (30.04%), Postives = 116/283 (40.99%), Query Frame = 1
Query:   46 PSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISPW--FDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGP-PPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHE--RNTVARANGGRPPPVTREGEPVATRSRPTSD-DSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLF------FQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 858
            PS FE+ M +++   +KPA  +        +P L    P    +E F    LL E  FL+ + SL  E FYG++R        P G   PL+  P                      L    RR++LL A +LPY+ AKLD      + T+ R         T    P A+ +R  S+ D  +   GG                R L   AR       +RL  L+ LF       Q YP    +YEGS  +YQWLYLF  + +FSP LR   +V+ R T  D
Sbjct:  994 PSLFELLMQERMAGGVKPALEYLVHTATESYPQLSAALPVRRLEETFALLRLLTERYFLARYDSLATERFYGMKRVSLRTAAAPGGVGEPLATEP----------------------LSDAARRQSLLYAVMLPYVKAKLDNYFRTLQETLPR---------TMPATPTASAARSQSEADGSERGNGG----------------RALVAVARARMNVFLQRLQQLQVLFRLKRAFLQAYPFAHFAYEGSFFLYQWLYLFGDTPYFSPLLRRMKIVLVRVTAAD 1229          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: L8GMZ9_ACACA (Peroxisome assembly protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMZ9_ACACA)

HSP 1 Score: 81.6 bits (200), Expect = 1.880e-13
Identity = 102/361 (28.25%), Postives = 136/361 (37.67%), Query Frame = 1
Query:    7 MLVSSALEADSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAAEVSDAKARTRMSTSPSGAAGTPSSGGAGGSVRLGDRV-AR-------YGRVLLVTAVVAFKIVEWW 1065
            M +++    ++  PSFFEM   Q++     PA ++A S  AVRWP L       DE F    LL+EA  L  H +  +E FY L+R R        G P    SP                   G  L   DRR +LL    LPY+ AKLD  H+R     +       +  EG          SDD         D                                   R LF   YP   A YEG   VYQ LYL+  + +++P L L  + V+R ++ED           E++   AR R + + S   G     GA   VR   RV AR       Y  + L   +  FK +EWW
Sbjct:    1 MFMANFSSGEAQRPSFFEMVAQQELLPFFGPALKYALSVAAVRWPRLEWGVTHHDELFYGLRLLLEAHHLRRHDASFSEHFYSLKRVRVAAPTT--GAPDSGASPSPAT--------------AGSRLTDHDRRVSLLLLVGLPYVKAKLDQLHKRMAGPLSGW-----LETEG----------SDD---------DEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARGLFVAGYPWASAVYEGLFFVYQVLYLYDHTRYYTPFLHLQRLQVQRLSLED---------TIEMTQDTARRRAAGAESWGVGDAR--GAAAVVRTVGRVLARAWHVVEDYSALALPLVLFVFKFLEWW 310          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A7S2UT60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT60_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.230e-13
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 1
Query:    1 MDMLVSSALEADSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWP-SLHRISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRR 264
            MDM +S      S++P++FEMF+ ++++Q LKPAA H  S L  RWP +L  ++  FDEA+ A S  V+   L ++  LLAE  YGL+R
Sbjct:    1 MDMFISHVEVPGSTMPTYFEMFIEERIDQGLKPAAHHILSVLCERWPGALAGLASRFDEAYAAISAAVQGACLRSNDCLLAEYLYGLQR 89          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A3M6VD70_9STRA (Peroxisome assembly protein 12 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD70_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 8.030e-13
Identity = 75/276 (27.17%), Postives = 113/276 (40.94%), Query Frame = 1
Query:   37 SSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLHRISPW--FDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 858
            +S PS FE+ M +++    KPA  +    L   +P+L    P    DE++      +E+ FLS + SL  E FYG++R                    A E+A  +             L  R R+ AL  A ++PYL  KLD  ++              ++      +TR+  T D                     R  +R +S   +R R+ A     AL+  F   YP    +YEGS  +YQWLYLF  + FFSP L+    ++ R T +D
Sbjct:   19 TSTPSLFELLMQERMAAGFKPAVEYLVHTLCESYPNLALSLPVRRLDESYALLRCCIESYFLSRYDSLATEKFYGMKRVMI-----------------ANENAKATTSP----------LTPRARKLALFFAVIVPYLKTKLDAYYKETAE----------LSTHTTVTSTRNATTDD---------------------RREKR-MSRFLQRLRSFAY--FQALKKAFVVTYPYAHFTYEGSFFLYQWLYLFGDTPFFSPFLKWMKTILVRVTADD 233          
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Match: A0A0L0S2L0_ALLM3 (Peroxin-12 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S2L0_ALLM3)

HSP 1 Score: 79.7 bits (195), Expect = 1.010e-12
Identity = 84/295 (28.47%), Postives = 124/295 (42.03%), Query Frame = 1
Query:   10 LVSSALEADSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPS-LHRISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGPPPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLAKLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDRSGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAA 891
            L S+   + +S PS FE+   +Q+   L PA R   ++ A+R+P  L R+  + DE F    L+V+  +L    +  AESFYGL+R R                       H S DL  +           D RK+L    ++PYL  +L   H   +            T  G  V       SD   +S T                    +   A  A   ARRR + L+ LF ++YPL+   Y G+ LVYQ LY+F  + ++SP L + G+ V+R T  D +     AA+A
Sbjct:   89 LFSTLHPSQASTPSVFELVAQEQLHNLLSPALRSVLASYAIRYPRYLLRVLQFHDELFALLMLVVQRHYLRTSKASFAESFYGLKRAR-------------------TVRVHRSDDLTPS-----------DVRKSLFCLVVVPYLKQQLHELHREWS------------TELGTDVLGDE---SDSGSESDT------------------ESVELPATPATAAARRR-TKLKRLFLKIYPLVHFVYTGTHLVYQLLYMFDWTRYYSPLLHVLGVEVKRVTSADMRAMQRIAASA 319          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig864.17673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPR5_ECTSI6.760e-13159.75Pex2_Pex12 domain-containing protein n=2 Tax=Ectoc... [more]
UPI00064521021.180e-1726.23hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8K1FCI4_PYTOL1.050e-1627.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X891_9STRA4.710e-1631.07Peroxin-12 n=2 Tax=Nothophytophthora sp. Chile5 Ta... [more]
K3WL72_GLOUD1.010e-1426.15Peroxin-12 n=1 Tax=Globisporangium ultimum (strain... [more]
A0A5D6Y815_9STRA1.820e-1430.04Peroxin-12 n=1 Tax=Pythium brassicum TaxID=1485010... [more]
L8GMZ9_ACACA1.880e-1328.25Peroxisome assembly protein, putative n=1 Tax=Acan... [more]
A0A7S2UT60_9STRA2.230e-1343.82Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A3M6VD70_9STRA8.030e-1327.17Peroxisome assembly protein 12 n=1 Tax=Peronospora... [more]
A0A0L0S2L0_ALLM31.010e-1228.47Peroxin-12 n=1 Tax=Allomyces macrogynus (strain AT... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig864contigL-elsbetiae_contig864:167..2904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score400.2
Seed ortholog evalue1e-108
Seed eggNOG ortholog2880.D8LPR5
Preferred namePEX12
KEGG koko:K03327,ko:K06653,ko:K13345
KEGG TC2.A.66.1,3.A.20.1
KEGG Pathwayko04111,ko04146,map04111,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0006082,GO:0006464,GO:0006513,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009062,GO:0009653,GO:0009790,GO:0009791,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016054,GO:0016558,GO:0016567,GO:0016740,GO:0017038,GO:0019395,GO:0019538,GO:0019752,GO:0019787,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0036211,GO:0042579,GO:0042886,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0048137,GO:0048232,GO:0048468,GO:0048515,GO:0048598,GO:0048609,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0055114,GO:0061630,GO:0061659,GO:0065002,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1901575,GO:1990351,GO:1990415,GO:1990429
EggNOG free text desc.protein import into peroxisome matrix
EggNOG OGsKOG0826@1,KOG0826@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04121
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-18_002190.1
Exons7
Model size1092
Cds size1092
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816945.4998176-CDS-L-elsbetiae_contig864:166..3241622816945.4998176-CDS-L-elsbetiae_contig864:166..324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 167..324 -
1691683931.8025727-CDS-L-elsbetiae_contig864:166..3241691683931.8025727-CDS-L-elsbetiae_contig864:166..324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 167..324 -
1622816945.5099778-CDS-L-elsbetiae_contig864:623..6401622816945.5099778-CDS-L-elsbetiae_contig864:623..640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 624..640 -
1691683931.8142076-CDS-L-elsbetiae_contig864:623..6401691683931.8142076-CDS-L-elsbetiae_contig864:623..640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 624..640 -
1622816945.5197845-CDS-L-elsbetiae_contig864:721..9181622816945.5197845-CDS-L-elsbetiae_contig864:721..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 722..918 -
1691683931.8234136-CDS-L-elsbetiae_contig864:721..9181691683931.8234136-CDS-L-elsbetiae_contig864:721..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 722..918 -
1622816945.5312848-CDS-L-elsbetiae_contig864:1219..14661622816945.5312848-CDS-L-elsbetiae_contig864:1219..1466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 1220..1466 -
1691683931.8325462-CDS-L-elsbetiae_contig864:1219..14661691683931.8325462-CDS-L-elsbetiae_contig864:1219..1466Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 1220..1466 -
1622816945.544695-CDS-L-elsbetiae_contig864:1733..19111622816945.544695-CDS-L-elsbetiae_contig864:1733..1911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 1734..1911 -
1691683931.8416579-CDS-L-elsbetiae_contig864:1733..19111691683931.8416579-CDS-L-elsbetiae_contig864:1733..1911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 1734..1911 -
1622816945.5582533-CDS-L-elsbetiae_contig864:2094..22701622816945.5582533-CDS-L-elsbetiae_contig864:2094..2270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 2095..2270 -
1691683931.850559-CDS-L-elsbetiae_contig864:2094..22701691683931.850559-CDS-L-elsbetiae_contig864:2094..2270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 2095..2270 -
1622816945.5705938-CDS-L-elsbetiae_contig864:2785..29041622816945.5705938-CDS-L-elsbetiae_contig864:2785..2904Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 2786..2904 -
1691683931.8593502-CDS-L-elsbetiae_contig864:2785..29041691683931.8593502-CDS-L-elsbetiae_contig864:2785..2904Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig864 2786..2904 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig864.17673.1prot_L-elsbetiae_contig864.17673.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig864 167..2904 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig864.17673.1

>prot_L-elsbetiae_contig864.17673.1 ID=prot_L-elsbetiae_contig864.17673.1|Name=mRNA_L-elsbetiae_contig864.17673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=364bp
MDMLVSSALEADSSLPSFFEMFMTQQVEQNLKPAARHAHSALAVRWPSLH
RISPWFDEAFLAFSLLVEARFLSNHSSLLAESFYGLRRCRYGPKLGPPGP
PPLSVSPEAQEDAHVSFDLNGAGYGPGQGLRARDRRKALLTAALLPYLLA
KLDGGHERNTVARANGGRPPPVTREGEPVATRSRPTSDDSVDSATGGGDR
SGCAGTGAGRFSRRGLSNSARRARTEARRRLSALRSLFFQVYPLLRASYE
GSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEAAAAAEVS
DAKARTRMSTSPSGAAGTPSSGGAGGSVRLGDRVARYGRVLLVTAVVAFK
IVEWWNRVEAQVR*
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mRNA from alignment at L-elsbetiae_contig864:167..2904-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig864.17673.1 ID=mRNA_L-elsbetiae_contig864.17673.1|Name=mRNA_L-elsbetiae_contig864.17673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2738bp|location=Sequence derived from alignment at L-elsbetiae_contig864:167..2904- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATATGCTCGTGTCGTCAGCTCTGGAGGCTGATTCTAGCCTGCCTTC ATTTTTCGAGATGTTCATGACCCAACAGGTGGAGCAGAACCTCAAGCCGG CGGCGAGGCACGCTCACAGGTAGTAGGTAACACAAGTTGGTTTGTGAGTG ATTTCCTGCGGTGTTGCGGTGTTGCGTCTATAATCCGCTAAAACGAAAAC TCGGCTCTCTTGTGGTGTGTTTGGCCAGTCTAGTAGCAAGTGAGCAGCCC ACTGCTCAAGTGACAGACAGACCACTGCTGATACGTACGTACTACACCGA TGTCTTGTACATATGAAAAGCAACCAAGGTCTTCCGAAGTTGCTGTGGTT GCTCTGCTAAGATTATTGTCTCCTAAATTTAGTGACAGAATTACGAACGG AAGCAAACGAGGTTTCAGCAAGCGGTGTCTTTGAAATTATTTACAGCAGT AGCACCAATCATTCTTGTTGTAGGTGCGGCTCGCCGCATGAGAGGGTGAG AGGGAGACCCAAACCGCATTATTATTGGATTATTGTAGCCTTTGGTGAAC ACGACGACTAATGGGACCCCGCTGGCCTGCTGCTGCTTCGTCGCGTTTGC TTTCGCACACGCTACATATGCACCATTAAATCAGCGCCCTGGCAGTACGA TGGCCATCACTGCACCGCATCTCTCCCTGGTTCGACGAGGCTTTTCTGGC CTTCTCGTTGTTGGTCGAGGCAAGATTCTTGTCGAATCACAGTTCCCTGC TTGCTGAGAGCTTCTATGGCCTGAGACGGTGCCGCTACGGGCCGAAGTTA GGCCCCCCTGGTGAGAGAGAGAGAGAGGGGCGGGGTGAAAGGCGCAACAG GCTTCAATTCGTGAGCGCTCAAAACACGGTTGTCGGCGCGTTTGCAGATA GCCGTTTCTTTATGTATGTACATGAAAACAGCTGCACGCCTGCCGATCAG CAACTTGCTCTGTTTTTGGTCTGCACGACGTTTCCGATTTCAGGACCACC ACCGCTCAGCGTGAGCCCCGAGGCCCAGGAAGACGCGCACGTGTCCTTCG ACCTCAATGGCGCGGGCTACGGACCCGGGCAAGGGCTGCGGGCGAGAGAC AGACGCAAGGCGTTGCTGACGGCAGCGTTGCTCCCGTACCTCTTGGCCAA GCTCGACGGTGGGCATGAAAGGTATATGCAGAGCTTCACGATTGTTTTGA TCCATCACGTGCATGTAGGCTATCAATTTTTTTGTCGACAATTCACAGTA GTATCATGGAGTGATCTCAAAACCCATCCTGACCGAAAAAATAGTTGGAT GTGAGGGTTCGGCCGATTAGTCCTATTCCTCTGAATCGCGTTGCGCTCCT TTCCCTCAGCGCGTTTTCTGGCGCTTGCTGATGTTAAAGCCGTCCTCATT TATGCCAAACCATGTCGCACGGAACCGTGAAACTGTAGGAACACCGTGGC CCGGGCGAACGGCGGCCGGCCACCACCTGTTACTAGAGAAGGAGAACCAG TGGCAACGAGAAGCCGCCCGACTAGCGATGACAGTGTCGACAGTGCTACC GGCGGCGGCGATAGGAGCGGTTGTGCTGGGACGGGTGCCGGCAGATTCAG CCGGCGAGGTTTGTCGAACTCGGCGAGAAGGGCAAGAACCGAGGCAAGGC GACGTCTGTCTGCCCTTCGCTCGCTTTTTTTCCAGGTAAATGCTTGAGGG TACGTTCGTGTGATGCGGCTTCCCGTGTTGTTGCATGTATACAATAGCGT GGAGCCCAAACATGGGCAAATCAATCTCGAACACTTTCTACTCGAGGGTA CACAGTTAAACTTGGAAAAAACACGCGTTAACCTTTCGCTTAATAAGCCT TGTTTCATTACATAACGATCATTTTTCTGGATTGCAGCAGCGTTCTGCCT TTTGCCGATGCTATGATACGGATCGAAACTGAAAAGTGAAACCAGAGCCA ACCAGAGCCGACCACTTCCTTCTCCCATATACATAGGTGTATCCGCTCCT ACGTGCTTCTTACGAGGGGTCGTGCCTTGTATACCAGTGGCTCTATCTCT TCCGACGGTCGGCGTTCTTTTCCCCTGCCCTGAGACTGACGGGTATGGTC GTAAGACGGGCCACGATAGAGGATTGGCAAGAAGACGCTGAGGCAGCCGC GGCGGCGGAGGTCAGTGATGCGAAGGCGAGGACGTAAGGGATGGGTGTGG TGTTTTTCATGGCATGCATCCGATTATGTTCGAGTTTGTTCCGTGGCAGC TATGGGCAAGAGAGGAGAATGAGCACCAGTCGTTTTGCTTGCGTCAGTAA TGAGTTTATGGGAGACATGATGTTGTACCCCTTTTGAGAGGAGCATCCAT CCCATTTCTGTTTCTATAACATCATCCCGATATTAATAGCTTTGAATATT CGGCGACCTTGCGCCATGCGGAAGGAAGGGTAGGCAATACATTTTGGTTT AGTATTTTAGTTGCTGTTTCGGAATCACGCGCGCTCCACGATATCCGTCT GCCCTTTAACTACAAATAATTTTTCGCGATTCGTATGCTAATGCCTCGTT TTTGTCAGCACGGTAAACAGGGTTCTCCAGCTTCCGGAGCAGCGGGGACG CCTAGCAGTGGCGGTGCGGGTGGAAGTGTTCGCCTGGGAGATCGCGTGGC GCGGTACGGGAGGGTGCTTCTGGTGACGGCGGTTGTGGCATTCAAGATTG TGGAGTGGTGGAATAGAGTCGAAGCTCAGGTGAGATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig864:167..2904-

>mRNA_L-elsbetiae_contig864.17673.1 ID=mRNA_L-elsbetiae_contig864.17673.1|Name=mRNA_L-elsbetiae_contig864.17673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig864:167..2904- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATATGCTCGTGTCGTCAGCTCTGGAGGCTGATTCTAGCCTGCCTTC
ATTTTTCGAGATGTTCATGACCCAACAGGTGGAGCAGAACCTCAAGCCGG
CGGCGAGGCACGCTCACAGATGGATATGCTCGTGTCGTCAGCTCTGGAGG
CTGATTCTAGCCTGCCTTCATTTTTCGAGATGTTCATGACCCAACAGGTG
GAGCAGAACCTCAAGCCGGCGGCGAGGCACGCTCACAGCGCCCTGGCAGT
ACGATGGCCATCACTGCACCGCATCTCTCCCTGGTTCGACGAGGCTTTTC
TGGCCTTCTCGTTGTTGGTCGAGGCAAGATTCTTGTCGAATCACAGTTCC
CTGCTTGCTGAGAGCTTCTATGGCCTGAGACGGTGCCGCTACGGGCCGAA
GTTAGGCCCCCCTGCGCCCTGGCAGTACGATGGCCATCACTGCACCGCAT
CTCTCCCTGGTTCGACGAGGCTTTTCTGGCCTTCTCGTTGTTGGTCGAGG
CAAGATTCTTGTCGAATCACAGTTCCCTGCTTGCTGAGAGCTTCTATGGC
CTGAGACGGTGCCGCTACGGGCCGAAGTTAGGCCCCCCTGGACCACCACC
GCTCAGCGTGAGCCCCGAGGCCCAGGAAGACGCGCACGTGTCCTTCGACC
TCAATGGCGCGGGCTACGGACCCGGGCAAGGGCTGCGGGCGAGAGACAGA
CGCAAGGCGTTGCTGACGGCAGCGTTGCTCCCGTACCTCTTGGCCAAGCT
CGACGGTGGGCATGAAAGGACCACCACCGCTCAGCGTGAGCCCCGAGGCC
CAGGAAGACGCGCACGTGTCCTTCGACCTCAATGGCGCGGGCTACGGACC
CGGGCAAGGGCTGCGGGCGAGAGACAGACGCAAGGCGTTGCTGACGGCAG
CGTTGCTCCCGTACCTCTTGGCCAAGCTCGACGGTGGGCATGAAAGGAAC
ACCGTGGCCCGGGCGAACGGCGGCCGGCCACCACCTGTTACTAGAGAAGG
AGAACCAGTGGCAACGAGAAGCCGCCCGACTAGCGATGACAGTGTCGACA
GTGCTACCGGCGGCGGCGATAGGAGCGGTTGTGCTGGGACGGGTGCCGGC
AGATTCAGCCGGCGAGGTTTGTCGAACTCGGCGAGAAGGGCAAGAACCGA
GGCAAGGCGACGTCTGTCTGCCCTTCGCTCGCTTTTTTTCCAGGAACACC
GTGGCCCGGGCGAACGGCGGCCGGCCACCACCTGTTACTAGAGAAGGAGA
ACCAGTGGCAACGAGAAGCCGCCCGACTAGCGATGACAGTGTCGACAGTG
CTACCGGCGGCGGCGATAGGAGCGGTTGTGCTGGGACGGGTGCCGGCAGA
TTCAGCCGGCGAGGTTTGTCGAACTCGGCGAGAAGGGCAAGAACCGAGGC
AAGGCGACGTCTGTCTGCCCTTCGCTCGCTTTTTTTCCAGGTGTATCCGC
TCCTACGTGCTTCTTACGAGGGGTCGTGCCTTGTATACCAGTGGCTCTAT
CTCTTCCGACGGTCGGCGTTCTTTTCCCCTGCCCTGAGACTGACGGGTAT
GGTCGTAAGACGGGCCACGATAGAGGATTGGCAAGAAGACGCTGAGGCAG
CCGCGGCGGCGGAGGTCAGTGATGCGAAGGCGAGGACGTGTATCCGCTCC
TACGTGCTTCTTACGAGGGGTCGTGCCTTGTATACCAGTGGCTCTATCTC
TTCCGACGGTCGGCGTTCTTTTCCCCTGCCCTGAGACTGACGGGTATGGT
CGTAAGACGGGCCACGATAGAGGATTGGCAAGAAGACGCTGAGGCAGCCG
CGGCGGCGGAGGTCAGTGATGCGAAGGCGAGGACGAGAATGAGCACCAGT
CGAGAATGAGCACCAGTCCTTCCGGAGCAGCGGGGACGCCTAGCAGTGGC
GGTGCGGGTGGAAGTGTTCGCCTGGGAGATCGCGTGGCGCGGTACGGGAG
GGTGCTTCTGGTGACGGCGGTTGTGGCATTCAAGATTGTGGAGTGGTGGA
ATAGAGTCGAAGCTCAGGTGAGATGACTTCCGGAGCAGCGGGGACGCCTA
GCAGTGGCGGTGCGGGTGGAAGTGTTCGCCTGGGAGATCGCGTGGCGCGG
TACGGGAGGGTGCTTCTGGTGACGGCGGTTGTGGCATTCAAGATTGTGGA
GTGGTGGAATAGAGTCGAAGCTCAGGTGAGATGA
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