mRNA_L-elsbetiae_contig8639.17672.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A6H5JTQ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTQ7_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 4.520e-125 Identity = 200/248 (80.65%), Postives = 225/248 (90.73%), Query Frame = 1
Query: 112 GRITTVVKERGFAAAGEKGEEDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQ--ALDAYVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFLDNHYSPALLG 849
GRITTVV G AA KG+++V+LKIED+TLFTPDR+Q ICR+LSF V RGQSVLIFGPSGCGKSSLLRG+SGLW+AG G +SRHSD+E MFIPQKPYLPLGSLRAQMLYP SEDE + PA++EGILEQVQLGYLCSRSGGL A RDWQDELSLGEQQRLAFSRLLTN+PS FLDEATSALDE+NEA++Y+WL+ ALDA+VSVGHR+SLFRYHTHVLRGQSDG+WFFHTM+DFLDNHYSPA+LG
Sbjct: 489 GRITTVVTGGGSAAG--KGQKEVILKIEDLTLFTPDRKQAICRKLSFEVKRGQSVLIFGPSGCGKSSLLRGISGLWSAGRGSISRHSDDETMFIPQKPYLPLGSLRAQMLYPHSEDEVMLTPASMEGILEQVQLGYLCSRSGGLSAVRDWQDELSLGEQQRLAFSRLLTNTPSTVFLDEATSALDEENEAKVYSWLRTAALDAFVSVGHRASLFRYHTHVLRGQSDGKWFFHTMKDFLDNHYSPAMLG 734
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A835YW91_9STRA (ATP-binding cassette transporter, subfamily D, member 8, SmABCD8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW91_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.020e-63 Identity = 116/218 (53.21%), Postives = 154/218 (70.64%), Query Frame = 1
Query: 169 EEDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSED-EGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALDAYVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFL 819
++ V L++ ++L TPD IC LSF + RG+S+LI+GPSGCGKSSLLR ++GLW+ G G + R + + +F+PQKPY+PLG LR Q+LYP G A + LE V+LG++ +RSGGLGA RDW DELS+GEQQRLAF+RLL P++AFLDEATSAL +EARLY +++ VS+GHR+SLF +H+HVL GQW TM +FL
Sbjct: 180 DDGVCLRVTALSLRTPDGGGLICDSLSFALRRGESLLIYGPSGCGKSSLLRSIAGLWSYGSGAIERPAPRDALFLPQKPYMPLGDLRTQLLYPNEAGGAGGQGDAAIMHALETVRLGHIAARSGGLGAVRDWTDELSVGEQQRLAFARLLAQPPAVAFLDEATSALGGPDEARLYEAASNVESIVSIGHRTSLFAFHSHVLLCTEPGQWSLLTMAEFL 397
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A1Y1HP97_KLENI (ATP-binding cassette transporter n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP97_KLENI) HSP 1 Score: 216 bits (551), Expect = 1.180e-56 Identity = 115/214 (53.74%), Postives = 146/214 (68.22%), Query Frame = 1
Query: 184 LKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGI--LEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQA-LDAYVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDF 816
L ++D+++ TPDRRQT+ L+ + GQS+++ GPSGCGKSSLLR ++GLW AG G +S + F+PQKPY+PLGSLR Q+L+P+ E L PA E I LE+V LG L + GGLGA DW D LS GEQQR+AF+RLL P +AFLDE++SALD NEA LY+ LQ + YVSVGHR SL +YHTHVL+ W T Q F
Sbjct: 382 LILKDVSISTPDRRQTLFENLNLTLLEGQSLMVTGPSGCGKSSLLRAIAGLWNAGSGEISCPPAAQTFFLPQKPYMPLGSLRQQLLFPKDESHKLR-PADEELITALEEVHLGSLAEKVGGLGAVCDWSDMLSSGEQQRVAFARLLLQEPQVAFLDESSSALDSANEAHLYSLLQRRIHCYVSVGHRLSLVKYHTHVLQFTEGSGWRLQTSQAF 594
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A0N7Z3K7_9CYAN (ATP-binding protein of ABC transporter n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A0N7Z3K7_9CYAN) HSP 1 Score: 209 bits (532), Expect = 2.130e-54 Identity = 109/204 (53.43%), Postives = 139/204 (68.14%), Query Frame = 1
Query: 184 LKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALDA-YVSVGHRSSLFRYHTHVLRGQSDGQW 792
L IE +TL TP+R++T+ R+LS + Q VL+ G SGCGKSSLLR ++GLW AGEG + R + ++F+PQ+PY+ LG+LR Q+LYP E E A L+ ILEQV LG L R GG A RDW D LSLGEQQRL F+RLL N P A LDEATSALD+ NE +LY L+ + ++SVGHRS+L +YH +L D W
Sbjct: 351 LSIEHLTLLTPNRQRTLVRDLSIELPENQGVLVMGASGCGKSSLLRAIAGLWNAGEGTIVRPQIDRVLFLPQRPYMVLGTLRDQLLYPNRELE--IEDAQLQQILEQVNLGDLVDRFGGFEAQRDWSDVLSLGEQQRLTFARLLLNKPDYAILDEATSALDQANEEQLYEHLERIGTTFLSVGHRSTLAKYHQMILEFSQDQTW 552
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A8J9SFJ1_9CHLO (Vitamin B12 transport ATP-binding protein BacA n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFJ1_9CHLO) HSP 1 Score: 211 bits (536), Expect = 2.320e-54 Identity = 108/228 (47.37%), Postives = 149/228 (65.35%), Query Frame = 1
Query: 172 EDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSED--------EGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQA-LDAYVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFLDNH 828
E L ++++++ TPD + +C+ LSF + G+S+LI GPSGCGKSSLLR ++GLWT G G V + +M F+PQKPY+PLG+LR+Q+L+P D +G + L +LE+V L L R GGL A +W +LSLGEQQR+AF RLL + P +AFLDEA+ ALD EA LY L++ ++VSVGHRS L R+HTHVL + G+W F T+ + H
Sbjct: 407 EKAELVLDNLSVTTPDGSRQLCQGLSFSLAPGESLLIVGPSGCGKSSLLRAIAGLWTRGSGNVLAPAPTDMFFLPQKPYMPLGNLRSQLLFPSGSDSEHWISNRDGPVPDSELLALLEKVHLAALVERVGGLDAEVEWSHQLSLGEQQRVAFLRLLLHCPKLAFLDEASGALDTPTEAALYTALRSHCSSFVSVGHRSELIRFHTHVLENVNQGKWVFSTVDAYQSRH 634
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A7X8H5Y9_9DELT (ABC transporter ATP-binding protein/permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8H5Y9_9DELT) HSP 1 Score: 201 bits (510), Expect = 6.590e-54 Identity = 110/221 (49.77%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 157 GEKGEEDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALDA-YVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDF 816
G EE + +TL TP+ +T+ +L+ + G ++ + GPSG GKSSLLR ++GLWT GEG V R +E+ F+PQKPY+ LGSLR Q+LYP+ E + L +LE VQL +L R GG DW D LSLGEQQRLAF+RL N P A LDEATSAL+ +EA LY L+ALD Y+SVGHRSS+ YH HVL Q G+W F +++D+
Sbjct: 98 GIASEEADHFSLSHLTLLTPNSTRTLIHDLTLDLECGDNLAVVGPSGVGKSSLLRAIAGLWTQGEGVVKRPPLSEIFFLPQKPYMILGSLREQLLYPQIER--VISGEQLRNVLETVQLEHLPERVGGFDIELDWADVLSLGEQQRLAFARLFLNRPGFAVLDEATSALEMGSEANLYGKLKALDIQYISVGHRSSILDYHDHVLELQGYGRWRFLSVKDY 316
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A846A7Q0_9CYAN (ABC transporter ATP-binding protein/permease n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A7Q0_9CYAN) HSP 1 Score: 205 bits (522), Expect = 8.730e-54 Identity = 113/219 (51.60%), Postives = 142/219 (64.84%), Query Frame = 1
Query: 184 LKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALDA-YVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFLDNHYSP 837
L + D+TL TP+ ++T+ +LS +V + +LI GPSGCGKSSLLR ++GLW +G G ++R + M+F+PQKPY+ LG+LR QM YP E E L+ IL+QV L L R GGL A +DW D LSLGEQQRL F+RLL N P A LDEATSALD NEA LY LQ L +VSVGHR +L YH HVL+ + QW + D LD P
Sbjct: 262 LALIDLTLQTPNYQRTLVEKLSLQVPLEEGLLIVGPSGCGKSSLLRAIAGLWNSGSGAIARPELDHMLFLPQKPYMILGTLRQQMCYPNVEAE--VDDERLQQILQQVNLPDLAERFGGLEAEQDWGDVLSLGEQQRLTFARLLVNQPDYAILDEATSALDVDNEASLYHHLQKLKTTFVSVGHRRTLAAYHQHVLQLDQEHQWQLRSPADLLDTLTEP 478
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A2H4GZ77_PRODI (DivT n=1 Tax=Prochloron didemni TaxID=1216 RepID=A0A2H4GZ77_PRODI) HSP 1 Score: 209 bits (532), Expect = 9.350e-54 Identity = 114/208 (54.81%), Postives = 139/208 (66.83%), Query Frame = 1
Query: 172 EDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALD-AYVSVGHRSSLFRYHTHVLRGQSDGQW 792
ED IE +TL TP+R QT+ +ELS V G++VLI G SGCGKSSLLR ++GLW AG GR+ R + E++F+PQ+PY+ LGSLR Q+LYP + E + LE +L QV L L + GG A DW + LSLGEQQRLAF+RLL N P AFLDEATSALD QNE LY LQ + +VSVGHR SL YH VL+ D W
Sbjct: 434 EDNRFAIEALTLQTPNREQTLLKELSVSVEPGENVLIVGASGCGKSSLLRAIAGLWNAGTGRILRPNLEEILFLPQRPYMILGSLREQLLYPNGDRE--TPDDKLESVLHQVNLPQLLGKVGGFEAELDWSNVLSLGEQQRLAFARLLLNRPRYAFLDEATSALDLQNEKHLYQQLQYSNITFVSVGHRESLLNYHQRVLKLLGDANW 639
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: A0A2H4I9G3_9BACT (ABC transporter domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A2H4I9G3_9BACT) HSP 1 Score: 197 bits (502), Expect = 1.220e-53 Identity = 108/235 (45.96%), Postives = 147/235 (62.55%), Query Frame = 1
Query: 118 ITTVVKERGFAAAGEKGEEDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIPATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQALDAYV-SVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFL 819
+ + VK + E +E +TL+TP + + ++LS + G ++LI GPSGCGKSSLLR ++GLW AGEG V ++ F+PQ+PY+ G+LR+QM+YP S L A L+ IL+ VQL L R+GGL A RDW LS+GEQQRLAFSR+L +P + LDEATSALD NEA LY ++A A V S+ HR ++ ++HTHVL + DG W H DF+
Sbjct: 26 VDSTVKPSTMPGTRIRSHEGRRFALEKLTLYTPQFDRLLVQDLSLELHSGDALLITGPSGCGKSSLLRAIAGLWHAGEGTVHHPPMADLFFLPQRPYMQNGTLRSQMIYPASSTP-LDDAALLQ-ILQDVQLPELARRAGGLDAVRDWDKVLSIGEQQRLAFSRVLVRNPRLLILDEATSALDSANEAALYQRVRASGASVISIAHRPAVLKHHTHVLELRGDGAWALHAASDFV 258
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Match: UPI0019DB0146 (ABC transporter ATP-binding protein/permease n=1 Tax=Pleurocapsales cyanobacterium LEGE 10410 TaxID=1828828 RepID=UPI0019DB0146) HSP 1 Score: 209 bits (531), Expect = 1.500e-53 Identity = 114/222 (51.35%), Postives = 147/222 (66.22%), Query Frame = 1
Query: 169 EEDVLLKIEDMTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGEGRVSRHSDNEMMFIPQKPYLPLGSLRAQMLYPRSEDEGLSIP-ATLEGILEQVQLGYLCSRSGGLGANRDWQDELSLGEQQRLAFSRLLTNSPSMAFLDEATSALDEQNEARLYAWLQ-ALDAYVSVGHRSSLFRYHTHVLRGQSDGQWFFHTMQDFLDNH 828
E D L +E++TL TP+R+QT+ R+LS + GQS+ I G SG GKSSLLR ++GLW G GR+ R + M+F+PQKPY+ LG+LR Q+LYP ++ + IP L +L+QV L L + GGL W D LSLGEQQRLAF+RLL P+ A LDEATSALD QNE RLY LQ + VSVGHR SL +YH VL+ Q QW + +D+LD +
Sbjct: 434 ELDSRLALEEVTLQTPNRQQTLVRDLSVAIAPGQSLAIVGESGVGKSSLLRAIAGLWNKGAGRIVRPRSDSMLFLPQKPYMILGTLRQQLLYPHTDSQ---IPDERLYQVLQQVNLADLPDKVGGLDVELSWSDVLSLGEQQRLAFARLLLTQPNYAILDEATSALDVQNEKRLYQLLQESKTTIVSVGHRPSLLKYHQQVLQIQGQSQWQLFSAEDYLDRN 652 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8639.17672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8639.17672.1 >prot_L-elsbetiae_contig8639.17672.1 ID=prot_L-elsbetiae_contig8639.17672.1|Name=mRNA_L-elsbetiae_contig8639.17672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=219bp MTLFTPDRRQTICRELSFRVTRGQSVLIFGPSGCGKSSLLRGVSGLWTAGback to top mRNA from alignment at L-elsbetiae_contig8639:384..7372+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8639.17672.1 ID=mRNA_L-elsbetiae_contig8639.17672.1|Name=mRNA_L-elsbetiae_contig8639.17672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6989bp|location=Sequence derived from alignment at L-elsbetiae_contig8639:384..7372+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8639:384..7372+ >mRNA_L-elsbetiae_contig8639.17672.1 ID=mRNA_L-elsbetiae_contig8639.17672.1|Name=mRNA_L-elsbetiae_contig8639.17672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1314bp|location=Sequence derived from alignment at L-elsbetiae_contig8639:384..7372+ (Laminarionema elsbetiae ELsaHSoW15)back to top |