mRNA_L-elsbetiae_contig8634.17671.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8634.17671.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI) HSP 1 Score: 1084 bits (2804), Expect = 0.000e+0 Identity = 606/913 (66.37%), Postives = 686/913 (75.14%), Query Frame = 1
Query: 79 EGAFIPSDCFTGAKHGYVFKTGDKGLGLYVEGYVDRPVKGQPMPSHRPWNAGPGELAIRRGPLGPIPKPFKKVVPFRTRKEKDAAEESDMRPFMARMVAQKNSRGFQSTLLEREHVLDKHILDLLEHFSDPTFFKKKSGYNVHGEMLGKDGKMIVKVTPQKTEEEKAKLSWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAELNDREEELNRALIKVLKAEQGQTKLEFITEDYHYPGAYDLHGKVILEKGAPVLNDLHRTDEQTERACTYRYKAIQRYRAAHDDLLSAISKKDKALQKMLKHTDPATLMEISGEAVSSSGIGIYRQKKRVAEGSASTTGPSPN--QPMERPEQLRQKFAHSLKAEIKGKDRALLNEVAALEEDEANEMIIDFGKGAEVLPTSWRQDPETLKMMQRRRRQLIAENAADRRKVVCPWRPGGKHIAQEPWKPFTPRDHRPPVRSASEGKAETHKGGAGNTTIKQKGEGRG-----SGNGEQGAERRPHTAPTNRRKGFMDEISPRARRVLAAQSPGTSLHSAFSTYSTDPFPLDTKHRPTLQSASARTEYSIHGCPPSHTGLDPKTS--YQGT------TVQRAWAEI---PSSSNLARNPRVGSSSKRPRSAAVEISRKLPNPSRRPATACGTRGAAGGNGSNGAAPENDPGCNASQLTNQREEHEADEPSRDLNVRSGPGVTVLWARLCAPSSDLIYNSSVWPKAPNASRPTRRRSKPSKKSATTXXXXXXXXXXXXXXXXXXXXXXSSPA--DTGIARG-RAGDQAGPAIDGCPLEDLEDSLFASSSQRVNQRRRVFRGYADRSRRERTWDPGSTFFAEGASKHHLSRPRSCNNRKMNGGRGRGVNGAPSMGSATKKGHQRDRR---RVSAVVHPVDMDWEKVNI 2745
EG F+ S CFTGAK GYVFKTGDKGLG YV+GYVDR + + SHRPWNAGPGE A +RGPLGP PKPFKK+VP+RT+KEK AAEE+D RPFMARMVAQ+NSRGFQS L ERE VLDKHIL LLE FSDP FFKKK GYNVHG+MLGKDGKMIVKVTP+KTEEEKA+L WYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAE++ R++ELNRAL K LK GQTKLEFITEDYHYPGAY+ GKVILEKGAPV N+LHRTD Q ERACTYRYKAI+RYRAAH D+ SAI+KKDKALQK+LK TDPA L+EIS EAV+S+G+GIYRQ KR + S TG S QP ERPEQLRQKFAHSLKA+IKGKD+ALL E+AALEEDEA +M+ DFGKG EVLP SWRQDPE LK M+RRR++LIAENAADRRKVVCPWRPGGKHIAQEPWKPF PRDHRPPVRSASEGKAETH G G T+ Q+G RG GNG++GAERRP TAP +RRKGFMD ISPRARR+LAAQ+PGT LHS FSTYS DPFPL+T+ RP+ QS ARTEYS + P+ T +P+T +Q + T QRAWAEI P+SS R V RPRSAA EIS+ L P RRPATACGTR + +N A N N Q + H +DE SRDL+V++GPGVTVLWARLC+PSSDL+Y SVWP+A ASR TR R KP K SAT + P D G + G + G G PLED+E+SL+ASSSQRVN R+RVFRGY+DRSRRERTWDPGS F+AEGASKH + RP C R +NG R G TK+ H+RD+R R+S PVDMDWEKV +
Sbjct: 175 EGVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARRKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAEIDGRQDELNRALTKALK---GQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGMGIYRQTKRAGGRNGSATGESSAVLQPAERPEQLRQKFAHSLKAQIKGKDKALLKEIAALEEDEAEQMMGDFGKGTEVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGR-RGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPT-TEPRTDTLFQTSGRVGLGTQQRAWAEISCSPTSSQTLRGDFVA----RPRSAAAEISKNLQTPPRRPATACGTR-VPRESTANAVAASNVSSAN--QAREHEQGHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRQTRPRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDAGDSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGR-INGNRIGGKGDPRQEDDTTKRKHRRDKRHQSRISGDDVPVDMDWEKVGV 1074
BLAST of mRNA_L-elsbetiae_contig8634.17671.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE) HSP 1 Score: 934 bits (2413), Expect = 0.000e+0 Identity = 556/941 (59.09%), Postives = 639/941 (67.91%), Query Frame = 1
Query: 10 TTQDQDHNREINGAKDSE-ATADPEGAFIPSDCFTGAKHGYVFKTGDKGLGLYVEGYVDRPVKGQPMPSHRPWNAGPGELAIRRGPLGPIPKPFKKVVPFRTRKEKDAAEESDMRPFMARMVAQKNSRGFQSTLLEREHVLDKHILDLLEHFSDPTFFKKKSGYNVHGEMLGKDGKMIVKVTPQKTEEEKAKLSWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHFTAELNDREEELNRALIKVLKAEQGQTKLEFITEDYHYPGAYDLHGKVILEKGAPVLNDLHRTDEQTERACTYRYKAIQRYRAAHDDLLSAISKKDKALQKMLKHTDPATLMEISGEAVSSSGIGIYRQKKRVAEGSASTTGPSPN--QPMERPEQLRQKFAHSLKAEIKGKDRALLNEVAALEEDEANEMIIDFGKGAEVLPTSWRQDPETLKMMQRRRRQLIAENAADRRKVVCPWRPGGKHIAQEPWKPFTPRDHRPPVRSASEGKAETHKGGAGNTTIKQKGEGRGS------GNGEQGAERRPHTAPTNRRKGFMDEISPRARRVLAAQSPGTSLHSAFSTYSTDPFPLDTKHRPTLQSASARTEYSIHGCPPSHTGLDPKTS--YQGT------TVQRAWAEI---PSSSNLARNPRVGSSSKRPRSAAVEISRKLPNPSRRPATACGTRGAAGGNGSNGAAPENDPGCNASQLTNQREEHEADEPSRDLNVRSGPGVTVLWARLCAPSSDLIYNSSVWPKAPNASRPTRRRSKPSKKSATTXXXXXXXXXXXXXXXXXXXXXXSSPADTGIARGRAGD-----QAGPAIDGCPLEDLEDSLFASSSQRVNQRRRVFRGYADRSRRERTWDPGSTFFAEGASKHHLSRPRSCNNRKMNGGRGRGVNGAPSM-GSATKKGHQRDRR---RVSAVVHPVDMDWEKVNI 2745
+TQD + +DS+ A E FI S CFTGAK GYVFKTGDKGLG YV+GYVDR V+ + SHRPWNAGPGE A +RGPLGP PKPFKK+VP+RT+KEK AAEE+D RPFMARMVAQ+NSRGFQS L ERE VLDKHIL LLE FSDP FFKKK GYNVHG+MLGKDGKMIVKV+ YE EE + + KA GQTKLEFITEDYHYPGAY+ GKVILEKGAPV N+LHRTD Q ERACTYRYKAI+RYRAAH D+ SAI+KKDKALQK+LK TDPA L+EIS EAV+S+G+GIYRQ KR + S TG S QP ERPEQLRQKFAHSLK+++K KD+ALL E+AALEEDE +++ +FGKGA VLP SWRQDPE L M+RRR++LIAENAADRRKVVCPWRPGGKHIAQEPWKPF PRDHRPPVRSASEGKAETH G G ++ Q EGR S GNG++ AERRP TAP +RRKGFMD ISPRARR+LAAQ+PGT LHS FSTYS DPFPL+T+ RP+ QS ARTEYS + P+ T +P T +Q + T QRAW EI P+SS R V RP SAA +IS+KL P RRPATACGTR + N A N N Q ++H +DE SRDL+V+SGPGVTVLWARLC+PSSDL+Y SVWP+AP ASRPTRRR KP K SAT + P I G +G G G PLED+E+SL+ASSSQRVN R+R+FRGY+DRSRRERTWDPGS F+AEGASKH + RP C R +N R RG G P TK+ H+RD+R R+S PVDMDWEKV+I
Sbjct: 150 STQDMEKXXXXXXXEDSDSANPKDEEVFISSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQVRRKRSLSHRPWNAGPGEEATKRGPLGPAPKPFKKIVPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVS-----------------YE------------------------------------EESMEPSFPGGAKA-WGQTKLEFITEDYHYPGAYNTDGKVILEKGAPVSNELHRTDAQNERACTYRYKAIRRYRAAHSDIASAIAKKDKALQKVLKKTDPAILVEISEEAVTSTGLGIYRQTKRAGGRNGSATGASSAVLQPGERPEQLRQKFAHSLKSQMKSKDKALLKEIAALEEDETEQIMGNFGKGAGVLPNSWRQDPEGLNRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVSSAAQ--EGRRSVPIHEKGNGKKEAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSGNRPSPTLT-TEPCTDTLFQTSGRIGLGTQQRAWVEISCSPTSSQTLRGGFVA----RPHSAAAKISKKLRTPPRRPATACGTR-VPRESTDNAVAASNVSSTN--QAREHEQDHRSDEQSRDLHVQSGPGVTVLWARLCSPSSDLVYKRSVWPEAPAASRPTRRRGKPRKTSATAPVNGTTVAEGEHEWDATPGDPSTGPGP--IVAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRIFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGR-INWNR-RGGRGNPRQEDDTTKRKHRRDKRHQSRISGNDDPVDMDWEKVDI 1022
BLAST of mRNA_L-elsbetiae_contig8634.17671.1 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.360e-9 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1246 EANEMIIDFGKGAEVLPTSWRQDPETLKMMQRRRRQLIAENAADRRKVVCPWRPGGKHIAQEPWKPFTPRDHRPP 1470
+A+ ++ + + LP WR+D + LK M+ R+++L + K+VCPWRPGG+HIA+ PW+PF P+ RPP
Sbjct: 578 QADTIMAQANRDVDHLPGGWREDRQNLKAMKARQKELRRDKEDVAEKIVCPWRPGGQHIAKGPWEPFYPKRRRPP 652 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8634.17671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8634.17671.1 >prot_L-elsbetiae_contig8634.17671.1 ID=prot_L-elsbetiae_contig8634.17671.1|Name=mRNA_L-elsbetiae_contig8634.17671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=915bp DVETTQDQDHNREINGAKDSEATADPEGAFIPSDCFTGAKHGYVFKTGDKback to top mRNA from alignment at L-elsbetiae_contig8634:2128..8054+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8634.17671.1 ID=mRNA_L-elsbetiae_contig8634.17671.1|Name=mRNA_L-elsbetiae_contig8634.17671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5927bp|location=Sequence derived from alignment at L-elsbetiae_contig8634:2128..8054+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8634:2128..8054+ >mRNA_L-elsbetiae_contig8634.17671.1 ID=mRNA_L-elsbetiae_contig8634.17671.1|Name=mRNA_L-elsbetiae_contig8634.17671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5490bp|location=Sequence derived from alignment at L-elsbetiae_contig8634:2128..8054+ (Laminarionema elsbetiae ELsaHSoW15)back to top |